Camelina sativa (false flax): 104708129
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Entry
104708129 CDS
T05044
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104708129
09122 Translation
03013 Nucleocytoplasmic transport
104708129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104708129
03041 Spliceosome [BR:
csat03041
]
104708129
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104708129
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104708129
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104708129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
CarD_C
CENP-X
Motif
Other DBs
NCBI-GeneID:
104708129
NCBI-ProteinID:
XP_010422931
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All DBs
Position
8:complement(23455305..23459769)
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AA seq
624 aa
AA seq
DB search
MISKYRYDYNCGCIFIPALWFFVKDEFRDAILQRAPIESFALKTVQEFIQPQKQTKLAQD
ENQMLENMLRTLLQELVAAAAQSGDDQIMQYGQLIDDDEDDQNIHGQIPHLLDVVLYLCE
KEHVEGGMIFQLLEDLTEMSTMKNCKDVFGYIESKQDILGKQELFARGKLVMLRTCNQLL
RRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDPPNGISVDFNFY
KTFWSLQEYFCNPASLTSASTKWQKFSSSLAVVLNTFDAQPLSEEEGEANSLEEDAATFN
IKYLTSSKLMGLEVKDSSFRRHILLQCLILFDYLRAPGKNDKDLPSETMEELKSCEDRVK
KLLEITPPKGKEFLRAVEHILEREKNWVWWKRDGCPPFEKQPIEEKSPNAGQKKRRQRWR
MGNKELSQLWRWADQNPNALTDSQRVRTPAIADYWKPLAEDMDPSAGIEDEYHHKNNRVY
CWKGLRFAARQDLEGFSRFTDFGIEGVVPVELLPPEVRSKYQAKPNEKAKRAKKEETKGG
SQETEGNQIGVSNSEAEAEAEGGRGEAEAMESDAIADTPTPEEQQRHGGSDTDNGQEAGQ
IEDAESEEAGLMDADLNHPPMPVS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgaaatacagatatgattataattgtggttgtatctttatacctgctttgtgg
ttcttcgtcaaggatgaatttagagatgctatattgcaacgagctccaattgaaagcttt
gccctcaagactgttcaagagtttatacaacctcagaaacaaacaaagttggctcaagat
gaaaaccaaatgcttgaaaacatgctccggacattactgcaggagctagtggctgctgct
gcgcaatcaggagatgatcagattatgcagtatggtcagttgattgatgatgatgaagat
gatcaaaatatacatggccagattcctcatcttctagatgttgtgctttatctttgtgag
aaagagcatgttgaaggtggcatgatattccagctgttggaggatttgacggaaatgtct
actatgaaaaactgtaaagatgtttttggttatattgaaagcaaacaagatatattgggc
aagcaagagctttttgcgcgcggaaaacttgtaatgttgaggacttgtaaccaacttctc
cggcgactctcaaaggccaatgacgtggtattctgtggaagaatcctcatgttcttggct
cacttttttcctttatctgagcgatcagccgtgaacataaaaggcgtttttaatacatct
aacgaaaccaaatatgaaaaagatcctccaaatggcatttctgtagatttcaacttctat
aaaacattttggagtttacaggagtatttctgtaatcccgcttctcttacttctgcatct
accaagtggcagaaattttcatctagtttggcggttgtattaaacacctttgacgcacaa
ccactaagcgaagaagagggagaggctaatagtttggaggaagatgcagcaacttttaat
ataaagtacttaactagtagtaaattaatgggtttagaggtaaaggattcgagtttccga
cgacatattcttctccagtgcctcatactgtttgattatctgagggcaccagggaagaac
gacaaagatctgccatctgaaaccatggaagagcttaagtcatgtgaggatcgcgtaaag
aaattgcttgagatcactccgcctaaaggaaaagaattcctccgtgcagttgagcatata
ttggagcgcgaaaagaattgggtctggtggaaacgtgatggatgcccaccatttgaaaag
caaccgatagaagagaaatcaccgaatgcagggcaaaagaaacggaggcaaagatggaga
atggggaataaagaactctcccaactttggagatgggcagatcaaaatccgaatgctttg
actgattctcaacgtgtccgaacccctgccattgcagactactggaaaccattagcagaa
gatatggacccgtcagctggcatcgaagatgagtaccatcataaaaacaacagagtttac
tgctggaaaggtctacggtttgcagctcggcaagacctggaaggattttcgaggtttact
gattttggaatcgaaggagttgtccctgttgaactattgccacctgaggtccgctccaaa
tatcaagctaaaccgaacgaaaaagcaaaacgagcgaagaaagaagaaaccaaaggtgga
tctcaggaaacagagggaaaccagattggtgtttctaatagtgaagctgaagctgaagct
gaaggaggaagaggcgaagcagaggcgatggaaagtgatgctattgcagacactcctaca
cctgaggaacaacaaagacacggtggttctgacacagacaacggtcaagaggctggtcaa
atcgaagacgcagagtcagaagaagctggtttgatggacgctgatcttaatcatcctcct
atgcctgtctcgtga
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