KEGG   Camelina sativa (false flax): 104708129
Entry
104708129         CDS       T05044                                 
Name
(RefSeq) THO complex subunit 1-like
  KO
K12878  THO complex subunit 1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104708129
  09122 Translation
   03013 Nucleocytoplasmic transport
    104708129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104708129
   03041 Spliceosome [BR:csat03041]
    104708129
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104708129
Spliceosome [BR:csat03041]
 Complex C
  Other components
   EJC/TREX
    104708129
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104708129
SSDB
Motif
Pfam: efThoc1 CarD_C CENP-X
Other DBs
NCBI-GeneID: 104708129
NCBI-ProteinID: XP_010422931
LinkDB
Position
8:complement(23455305..23459769)
AA seq 624 aa
MISKYRYDYNCGCIFIPALWFFVKDEFRDAILQRAPIESFALKTVQEFIQPQKQTKLAQD
ENQMLENMLRTLLQELVAAAAQSGDDQIMQYGQLIDDDEDDQNIHGQIPHLLDVVLYLCE
KEHVEGGMIFQLLEDLTEMSTMKNCKDVFGYIESKQDILGKQELFARGKLVMLRTCNQLL
RRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDPPNGISVDFNFY
KTFWSLQEYFCNPASLTSASTKWQKFSSSLAVVLNTFDAQPLSEEEGEANSLEEDAATFN
IKYLTSSKLMGLEVKDSSFRRHILLQCLILFDYLRAPGKNDKDLPSETMEELKSCEDRVK
KLLEITPPKGKEFLRAVEHILEREKNWVWWKRDGCPPFEKQPIEEKSPNAGQKKRRQRWR
MGNKELSQLWRWADQNPNALTDSQRVRTPAIADYWKPLAEDMDPSAGIEDEYHHKNNRVY
CWKGLRFAARQDLEGFSRFTDFGIEGVVPVELLPPEVRSKYQAKPNEKAKRAKKEETKGG
SQETEGNQIGVSNSEAEAEAEGGRGEAEAMESDAIADTPTPEEQQRHGGSDTDNGQEAGQ
IEDAESEEAGLMDADLNHPPMPVS
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgatttcgaaatacagatatgattataattgtggttgtatctttatacctgctttgtgg
ttcttcgtcaaggatgaatttagagatgctatattgcaacgagctccaattgaaagcttt
gccctcaagactgttcaagagtttatacaacctcagaaacaaacaaagttggctcaagat
gaaaaccaaatgcttgaaaacatgctccggacattactgcaggagctagtggctgctgct
gcgcaatcaggagatgatcagattatgcagtatggtcagttgattgatgatgatgaagat
gatcaaaatatacatggccagattcctcatcttctagatgttgtgctttatctttgtgag
aaagagcatgttgaaggtggcatgatattccagctgttggaggatttgacggaaatgtct
actatgaaaaactgtaaagatgtttttggttatattgaaagcaaacaagatatattgggc
aagcaagagctttttgcgcgcggaaaacttgtaatgttgaggacttgtaaccaacttctc
cggcgactctcaaaggccaatgacgtggtattctgtggaagaatcctcatgttcttggct
cacttttttcctttatctgagcgatcagccgtgaacataaaaggcgtttttaatacatct
aacgaaaccaaatatgaaaaagatcctccaaatggcatttctgtagatttcaacttctat
aaaacattttggagtttacaggagtatttctgtaatcccgcttctcttacttctgcatct
accaagtggcagaaattttcatctagtttggcggttgtattaaacacctttgacgcacaa
ccactaagcgaagaagagggagaggctaatagtttggaggaagatgcagcaacttttaat
ataaagtacttaactagtagtaaattaatgggtttagaggtaaaggattcgagtttccga
cgacatattcttctccagtgcctcatactgtttgattatctgagggcaccagggaagaac
gacaaagatctgccatctgaaaccatggaagagcttaagtcatgtgaggatcgcgtaaag
aaattgcttgagatcactccgcctaaaggaaaagaattcctccgtgcagttgagcatata
ttggagcgcgaaaagaattgggtctggtggaaacgtgatggatgcccaccatttgaaaag
caaccgatagaagagaaatcaccgaatgcagggcaaaagaaacggaggcaaagatggaga
atggggaataaagaactctcccaactttggagatgggcagatcaaaatccgaatgctttg
actgattctcaacgtgtccgaacccctgccattgcagactactggaaaccattagcagaa
gatatggacccgtcagctggcatcgaagatgagtaccatcataaaaacaacagagtttac
tgctggaaaggtctacggtttgcagctcggcaagacctggaaggattttcgaggtttact
gattttggaatcgaaggagttgtccctgttgaactattgccacctgaggtccgctccaaa
tatcaagctaaaccgaacgaaaaagcaaaacgagcgaagaaagaagaaaccaaaggtgga
tctcaggaaacagagggaaaccagattggtgtttctaatagtgaagctgaagctgaagct
gaaggaggaagaggcgaagcagaggcgatggaaagtgatgctattgcagacactcctaca
cctgaggaacaacaaagacacggtggttctgacacagacaacggtcaagaggctggtcaa
atcgaagacgcagagtcagaagaagctggtttgatggacgctgatcttaatcatcctcct
atgcctgtctcgtga

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