Camelina sativa (false flax): 104709149
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Entry
104709149 CDS
T05044
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104709149
04120 Ubiquitin mediated proteolysis
104709149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104709149
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104709149
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104709149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
104709149
NCBI-ProteinID:
XP_019083822
LinkDB
All DBs
Position
8:complement(2805734..2810876)
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AA seq
999 aa
AA seq
DB search
MTAAEVLSEGKELLLSRDLMERVLIDRLSGDFSSAEPPFPYLLGCYRRAHDESKKIQSMK
DKSLRSEMEIVTKQAKNLAVSYCRIHLANPDMFGNADTPSGGLDTKLKKKNKSPVLPLIF
AEVGSGSLDMFGSSSSGVQAPPGFLDEFFKDSDFDSLDPVLKELYEDLRSTVINVSVLGD
FQPPLRALKYLVSLPVGAKSLVSHEWWVPRGAYMNGRAMELTSILGPFFHISALPDNTLF
KSQPDVGQQCFSEASERRPADLLSSFSTIKNFMNILYSGLHDVLMILLKSTDTRECVLQF
LAEVINANASRAHMQVDPVSCASSGMFVNLSAVMLRLCEPFLDPHLTKRDKIDPKYAFCG
HRLKLSDLTALHASSEEVSEWIDKDATTSANGAGQENGNESRLLQSKEATSSSSNASGQN
AKSATKYTFICECFFMTARVLSLGLLKALSDFKHLAQDISRGEDNLAQLKAMRDQAPSPQ
LELDISRMEKELELYSQEKLCHEAQILRDGDFIQRALSFYRLVVVWLVGLAGGFKMPLPS
TCPMEFSFMPEHFVEDAMELLIFASRIPKALDGVPLDDFMNFIIMFMASPEYVRNPYLRA
KMVEVLNCWMPRSSGSSSATSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNI
RHNIAELLEYLWQVPSHRNAWRRIAKDEEKGVYLNFLNFLVNDSIYLLDESLNKILEIKQ
IEAEMSNTAEWEQRPTQERQERTRLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFLL
PEMVERVANMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKQLLKQIVRIYVNLARGDSENI
FPGAISSDGRSYNEQLFNAGADVLRRIGEEGRIIQEFMELGTKAKAAASEALDAEAALGE
IPDEFLDPIQYTLMRDPVILPSSRITVDRPIIQRHLLSDNHDPFNRAHLTSDMLIPDIEL
KTKIDEFVKSYQSKKRTTSGEDSSNKERIQTTSSNMLID
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgctgaggttctcagcgaaggtaaagagcttttgctttctcgtgatctgatg
gagagagtgctcatcgatcgtctctccggcgacttctcatccgccgagccgcctttccct
tacctactcggctgctaccgtcgtgctcacgacgaatcgaagaaaatccagtctatgaag
gacaagagtcttagatcggagatggagattgtcactaaacaggccaagaacctcgctgtt
tcttactgtaggattcacttggccaatcccgacatgtttggcaacgcggatacacctagc
ggtggacttgatactaagcttaagaagaagaacaagtctcctgtgctgcctttgatcttc
gccgaggttggttctggttcgttggatatgtttggaagtagtagcagtggggttcaagct
cctccggggtttttggatgagttcttcaaagactcggattttgatagtttggacccagtt
ttaaaggagctttacgaggacttgaggtctacggttatcaatgtatcagtgcttggagat
ttccagccaccattgagggcactcaagtatcttgttagcttacctgttggagctaaatct
ctggttagtcatgagtggtgggttccacggggcgcctatatgaacggtagagccatggag
ttgacaagcattctcggccctttcttccatattagtgcactgcctgataatacgcttttc
aagagtcaacctgatgttgggcaacagtgtttctctgaagcatcggaacgtcgtcccgca
gatttattatcatccttctccacaattaaaaattttatgaacatattgtacagcgggttg
catgatgtactgatgattttacttaaaagtacggatacccgtgagtgtgttctacagttt
cttgcagaggtgatcaatgccaatgcgtccagagcccatatgcaggttgatccagtctct
tgtgctagctcaggcatgtttgttaacctcagtgcagtaatgctccggctctgcgaacca
tttttagacccgcatttaactaaaagggataagattgatccaaaatatgcattctgtggc
catcgcttaaaactaagcgacttgactgctctccatgcatcatccgaagaagtttctgag
tggattgacaaagatgctacgacaagcgcaaatggtgctgggcaagaaaacgggaacgaa
agtcgcttgttacaatccaaagaagccacaagttctagtagtaatgcttctgggcaaaat
gcaaagtcagcaactaaatatactttcatttgtgaatgcttctttatgactgcaagggtc
cttagtttgggtctcctaaaagcactctctgactttaaacatcttgctcaggacatctcg
agaggtgaagataatcttgcacaactaaaagccatgagagatcaagcaccttctccacag
ttggaacttgatatatcccgaatggaaaaagaactagagctatattctcaggaaaagctt
tgccatgaggcccaaatattgagggatggcgattttattcagcgagctctgtctttctat
cgcctagtggttgtttggttagttggactagctggtggctttaagatgcctttaccgtca
acttgtcccatggaattctcatttatgcctgagcattttgttgaagatgcaatggagtta
ctgatatttgcttcaagaattcccaaagctttggatggtgtaccactggacgactttatg
aacttcataattatgttcatggcaagtcctgaatatgttagaaacccgtatctcagagca
aagatggttgaagttctgaactgctggatgcctcgttcaagtggttcttcatctgctaca
tctactctttttgaggggcatcagttatcgctcgagtatcttgtcaggaatttactgaaa
ctatatgtggacattgagttcacgggttcacacactcagttctatgacaagttcaatatt
cgccacaacattgccgagcttttggagtatctctggcaggtgcctagtcaccggaatgct
tggagacggattgcaaaagatgaagagaagggcgtgtacttgaacttcttaaacttctta
gtcaatgatagcatctatcttctagatgagagtcttaacaaaattctcgagattaaacaa
atcgaggcagagatgtcgaatactgcagaatgggagcagagaccaactcaagagagacag
gagagaacaagactttttcattctcaggagaatattgttagaatcgacatgaagcttgca
aatgaagatgtgacaatgcttgcatttacatccgaggagatcactgccccttttctactc
cctgagatggttgagagggttgcaaatatgcttaattacttcttgctacaactcgtgggt
ccacagcgtaaatcattaagcttgaaagatcccgagaagtacgagttccgtccaaaacag
ttgcttaaacagattgttcgcatatacgttaatctcgctagaggagactcagaaaacata
ttccctggtgccatatccagtgatggccgatcatacaacgaacagttattcaacgcagga
gcagatgtgcttaggagaataggcgaagaaggaagaatcattcaagagtttatggagtta
ggcacaaaagccaaagctgctgcttctgaagctctggatgctgaagctgcacttggcgaa
atacctgacgagttccttgacccaattcagtacacactaatgagagatccagtgatactt
ccaagctcaagaatcacagttgatcgacccatcatccaacgtcatcttctcagcgacaat
catgatccatttaaccgagcacatttgacatcggatatgttgataccggacatcgagttg
aagacgaaaatcgatgagtttgttaagtcgtatcagtctaagaaacggacaacaagtgga
gaagatagcagcaacaaggagaggatacagactacaagcagtaatatgttaattgattaa
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integrated database retrieval system
