Camelina sativa (false flax): 104725913
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Entry
104725913 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35-like
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104725913
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104725913
Spliceosome [BR:
csat03041
]
Complex C
Other components
Complex C specific factors
104725913
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
SecA_DEAD
UTP25
Motif
Other DBs
NCBI-GeneID:
104725913
NCBI-ProteinID:
XP_010442969
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All DBs
Position
2:15789079..15790857
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AA seq
592 aa
AA seq
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MEDDPSYVEYVSVEQRRAMVKDKFLLQRKRKASELEEELEANKENIAEASAKPSLLLQAT
NLKRDVPQVSATDLIILQEKEMMERLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRT
TSSKRRDLLRKQWHIIVNGDDVPPPIKDFKDMKFPKPVLDTLKKKGILQPTPIQVQGLPV
ILSGRDMIGIAFTGSGKTLVFVLPLIMISLQEEKMMPLGRGEGPIGLIICPSRELATQTY
EVIQQFVAPLVEAGYPELRSLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMR
LDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPV
TANVGRAGAANLDVIQEVEYVKQEAKVVYLLECLQKTSPPVLIFCENKSDVDDIHEYLLL
KGVEAVAIHGGKDQEDREYAISSFKSGRKDVLVATDVASKGLDFPDIQHVINYDMPAEIE
NYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAE
TIANASGVKGCAYCGGLGHRIRDCPKLENQKSMAISNSRKDYFGSGGYRGEI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatccaagctacgtcgagtatgtttcagtggagcagcgcagagcaatggta
aaggacaagtttcttcttcagcggaagcgaaaggcttcggaattggaggaagaattagaa
gctaacaaggaaaacatagccgaagcttctgccaaacccagtttactccttcaagcaact
aatctcaagcgagatgtaccacaggttagtgcaactgatctaatcatcttacaagagaaa
gagatgatggagcgtttatctgataagaagacgcttatgtctgttcgtgaattagccaaa
ggtatcacttatacagagcctctgttaactggttggaaacctcctttacatattagaacc
acgtctagtaaacggagagacttgcttaggaagcaatggcatattattgttaacggtgat
gatgttcctccccctatcaaggactttaaagatatgaagtttccaaaaccagttctcgat
acgctcaagaagaaagggatactgcagcctactccaattcaagttcaaggtcttcctgtg
attttgtctgggagagatatgattgggattgccttcactggttcaggtaagactttggtt
ttcgtgcttcctttgatcatgatttctctccaagaagagaagatgatgcctcttggtcgt
ggagaaggtcccattggtcttattatttgcccttctagagagcttgctactcagacttat
gaagtgattcagcagtttgttgctcctttagtcgaggctggataccctgagttgaggtcg
ttgctatgtattggaggagttgatatgagatctcagttggaggttgtcaagagaggtgtt
cacatcgttgttgcaacacctgggaggttaaaggatatgctcgccaagaaaaagatgagg
ttagatgcttgtaggtacttgacactagatgaggcagataggttggttgatttgggtttc
gaagatgatataagggaagtctttgatcactttaagtctcaacgtcaaacgcttttgttt
tctgcaacaatgccaacaaagattcaaatctttgccagaagtgctcttgtgaaacctgtg
actgctaatgtaggaagagctggagctgcgaatcttgatgtgatccaagaggttgaatac
gtcaaacaagaagcaaaggttgtttacctactcgagtgtctacagaagacctctccgccg
gttttaatattctgtgagaacaaatctgatgttgatgatattcacgagtacttgttactg
aagggagtagaagcagtggctatacatggaggcaaagatcaagaagacagagagtatgca
atctcttcgtttaaatctgggagaaaagatgtcttggttgcgactgatgttgcttcaaag
ggtctagatttccctgacatacagcatgttattaactacgacatgccagctgagattgag
aactatgtgcataggatagggcgaacaggtcggtgtggtaagactgggatagcaacgacg
tttataaacaagaaccaaagtgaaaccacgctgctcgatttgaaacacttgttgcaagaa
gctaaacagaggattccacctgtccttgctgagctgaatgatccaatggaagaagcagag
accattgctaatgcaagtggtgtcaagggttgtgcgtattgtggtggtcttggacatcgt
attcgagactgtccaaaacttgagaaccagaagagtatggccatatctaattcaaggaaa
gactattttggctctggtggctacagaggagaaatataa
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