Camelina sativa (false flax): 104739641
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Entry
104739641 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104739641
03036 Chromosome and associated proteins [BR:
csat03036
]
104739641
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104739641
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Helicases
104739641
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104739641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Paramyxo_ncap
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
104739641
NCBI-ProteinID:
XP_010458375
LinkDB
All DBs
Position
2:complement(26145922..26150142)
Genome browser
AA seq
679 aa
AA seq
DB search
MPSLILSDKKEEKKMKKKIALETPELDSKKGKKEAKLKFSSSDEEDSEKKKSKRKDKKRK
AAESEEEEEEGKSDSSSEKKKKKKSSKKVKLGIEDVEVDNPNAVSKFRISAPLREMLKKN
GIEALFPIQATTFDMVLDGADLVGRARTGQGKTLAFVLPILESLINGPAKSKKKNGYGRP
PSVLVLLPTRELAKQVNADFETYGLALGLTSCCVYGGEGYSFQQNSLRKGVDIVVGTPGR
VKDFINTEKIDLSYLQFRVLDEADEMLRMGFVEDVEFILGKVEDATKVQTLLFSATLPQW
VQSISRKFLKKDLKTIDLVGNDKMKASNSVRHIAIPCNKAAMPRLIPDIISCYSSGGQTI
IFAEKKEEANELSGLLAGSRTLHGDIQQSQREVTLAGFRKGKFSTLVATNVAARGLDIND
VQLIIQCEPPRDVESYIHRSGRTGRAGNTGVAVTLYESRKSSISRIEKEAGIKFEYLSAP
QPDDIARAGGMDAAEKIKQVCDSVVPAFLEAAKNLLESSGLSAEVLLAKALAKTAGFTEI
KKRSLLTSMENHVTLHLEAGREIYSPSYVYGMLRRVLPEDKVERIEGLSLTADKSGAVFD
VVQSDLDLFLAAGQKNAGSMSLEVVKEMPKLQEREPLPQRRFGRGGSRFGSGGGRGGGNR
FGGGGGRGGRGGGRGGGRW
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactaatcttatccgacaagaaagaggagaagaagatgaagaagaagatagca
ttggaaaccccagagcttgactctaagaaggggaagaaggaggcgaagctgaagttttca
tcttctgatgaagaagattcggagaagaagaagagtaagaggaaggacaagaaacgtaag
gctgcggagtcggaggaggaagaagaagaagggaagagcgattctagctctgagaagaag
aagaagaagaagagcagcaaaaaggttaagttgggtattgaagatgttgaggttgataac
cctaacgctgtttccaagtttaggatctctgctccgttgagggagatgcttaagaagaat
ggtattgaagctcttttccctattcaagctacaacctttgatatggttctcgatggtgct
gatttagttggacgtgctcgtactggtcagggtaaaacactggcctttgtgttgcctata
ttggaatcattgatcaatggacctgcgaaaagtaaaaagaagaatgggtatgggaggcca
ccaagtgttttggtccttttaccaaccagagaattggccaagcaggtgaatgctgacttt
gaaacatacggattagcacttgggttaacttcttgctgtgtctatggaggtgaaggttat
tctttccagcagaatagtttaaggaaaggtgttgacattgtggttggaacccctggtcgt
gttaaggactttattaataccgaaaaaattgatctgagctatctacaattccgtgtgctt
gatgaagctgatgaaatgttgaggatggggtttgttgaggatgttgaatttatattaggg
aaagtggaagatgctactaaagtccagactcttctcttcagtgctactctcccacaatgg
gttcaaagtatctctcgcaagtttcttaaaaaagacctgaagactattgatcttgttggt
aatgataaaatgaaggccagtaatagtgtacgacacattgctattccctgtaataaggca
gccatgcctcggttgattcctgatattatcagttgctatagcagtggaggccaaaccatt
atttttgctgagaaaaaagaggaagcgaacgagctttctggtttgttggctgggtcaaga
actttgcatggagacatacagcaatcacaacgcgaggttactcttgctggatttaggaag
ggcaagttttcgacattggtggctactaacgttgctgctcgtggtctagatatcaatgat
gtgcagttaattatacagtgtgagcctccacgtgatgttgaatcatatattcatcgttca
ggccgaacaggaagagcaggcaacactggagttgcagttacactttacgaatctagaaag
tcaagtatatccaggatcgaaaaagaagcaggtataaaatttgagtacttgtctgcacct
cagcctgatgatattgcccgagctggtggtatggatgctgctgagaaaattaaacaagtt
tgcgacagtgtggttcctgcattcttggaagctgcgaagaatttattagaaagttctggt
ttatcagctgaagtactcctcgcaaaagctcttgcaaaaacagcgggcttcactgagatt
aagaaaaggtcacttcttacatcaatggagaaccatgtaacactacatcttgaagcagga
agggaaatatactcgccgtcatatgtttatggaatgctaagaagagttttaccagaagac
aaggtggagcggattgaagggttgagtctaacagcagataaaagcggagcagtgtttgac
gttgtgcaatcggatctagacttattccttgcagctggacaaaagaatgctggaagtatg
agcttggaagtggttaaggagatgcctaaacttcaggagagagaaccattgccacaaaga
agatttggtcgcggtggaagccggttcggcagtggtgggggaagaggtggtggaaaccgg
ttcggcggtggtggcggcagaggaggaagaggtggcggtagaggaggaggtaggtggtag
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