Camelina sativa (false flax): 104739727
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Entry
104739727 CDS
T05044
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104739727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104739727
03400 DNA repair and recombination proteins [BR:
csat03400
]
104739727
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104739727
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104739727
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104739727
Bloom's syndrome complex (BTR)
104739727
FA (Fanconi anemia) pathway
104739727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
PspA_IM30
Cob_adeno_trans
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
104739727
NCBI-ProteinID:
XP_010458470
LinkDB
All DBs
Position
14:complement(4943461..4952061)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSRSYLPEVQKPRGPQTNWSEHAKALESPSSVTKFLSSNVLYALESQKPRDMAARSISFP
SVNVHTLAHPQVAKAWRALSSLSINNAYLRPGFTPPVDDGGTNGSFSARERSTVKVVSST
DGSFYMNNRQNQSALNVSGTGRSFHSFPSSVRGDDEIIAEKFPRVNDESEPRCTHLNGVE
KSFRNSAFPSEQLESGKACLDNIDDILENIDVDQIVMEHYHSTGTPQPSVSNFSLRTPPV
DRSASRFEEDSCLPPELCSNCSHGIKMFGSTQLGLCPEASTHVEQMKDVLLSISNELLDD
ATDLSPERVQQLRQERLQLKKQIQQLENHIRDKDSKKSQFLSSTATRTFQYETPKSTSYK
MDHPQTDFRPLPSDQGRYVCDSWNMPRDSSFSVEREQYVPKIIDVTYTEGSSDKRWSSHD
FPWTRKLEINNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICPG
ITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELKNEHSKYKLLYVTPE
KVAKSDSLLRHLENLNSRGLLSRFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPGIPVLA
LTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFDE
CGIIYCLSRMDCEKVSEKLQEFGHKAAFYHGSMEPEQRAFVQTQWSKDEINIICATVAFG
MGINKPDVRYVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGGV
DQSPMATGYNRVASSGRILETNTENLLRMVSYCENEVDCRRFLQLVHFGEKFDSTNCKKT
CDNCCSTQSLIDKDVTLITKQLVELVKQTGERFSSAHILEVYRGSLNQMVKKHRHETLQL
HGAGKQLSKLEVSRILHYLVTEDILVEDVRKSDMYGSVSSLLKVNNAKASVLFSGSQTVM
MRFPSSVKVLKPSKPGATPAKGPLTSEKQSTLPLSTEDAPPKDLNLSANMYTALRKLRTA
LVKEAPDGVMAYHIFINSTLQQISRRIPRTKEELLEINGLGKAKVSKYGDRLLETIDSTV
NEYCGTNKKDSIISNDSPHSGKRRRDENISPNVAEDDDFEVSPSQSCKKTVRSKSNDVLH
GECADGDRVGMVMEKLDFDFEDEDGSEIRPEGRVLPW
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggagttatcttcctgaagttcagaaacctagaggtcctcaaacgaattggtcg
gaacatgcaaaggcgctcgagagtccatcgtccgtgactaagtttctgagctccaatgtc
ctgtatgctctagaaagtcaaaagcctagagatatggctgcaaggtctatctcgtttccc
agtgtgaatgtgcatactttggcgcacccgcaagttgcaaaggcttggcgtgctctttca
agtctctcaataaataatgcctacctaagacctggctttactccccccgttgatgacggt
ggtaccaatggctcattttctgcaagagagagatccaccgtgaaagttgtatctagcact
gatggttctttttatatgaacaatcgacaaaaccaaagtgcattgaatgtttcaggaact
ggaagatcctttcacagttttccgtcctctgtccgtggtgatgatgaaataattgctgaa
aagtttccacgggtaaacgatgaatcagaacccagatgcacgcatttaaatggtgtggag
aaatcattcaggaattctgcattcccatctgagcagttggaatctggaaaagcatgtctt
gacaatattgatgacatacttgagaatattgatgtcgaccaaattgtgatggaacactac
cattctactggtactccgcagccatcagtatctaacttttcgttgagaactccacctgtg
gatagaagtgcttccagatttgaagaagactcttgtctgcctcctgaattatgttccaac
tgtagtcatggaataaagatgtttggatctactcagttagggctttgtccagaagcttca
acccatgtggaacaaatgaaggacgtgttgctttcaatatcaaatgaacttcttgacgat
gctactgacctgagtcctgagcgtgttcaacagcttcgtcaagagaggttacagctgaag
aagcaaattcagcagcttgagaaccatatccgagataaagatagtaaaaaatctcagttt
ttgtcatctacagctactcgtactttccagtatgaaacacctaaatcaacaagttataaa
atggatcatccacaaactgattttcgaccacttcctagtgaccaaggaagatatgtctgt
gatagctggaatatgccaagagattcttcattttctgtagagagggaacaatatgttccg
aagattattgacgtgacctacaccgaaggttcaagcgacaaaagatggagcagtcatgat
tttccctggacaagaaaattggagattaataataaaaaagtatttggaaatcactcgttt
cgaccaaaccagagagaaatcatcaatgcaacaatgagtggctctgatgtttttgttttg
atgccaactggaggagggaagagtttgacatatcagctccccgctctgatctgtccagga
ataacattagtcatttctccacttgtgtcacttattcaagaccagataatgaacctactg
caggccaatatacccgctgcttccctaagtgccggcatggaatgggctgaacaactgaag
atctttcaggagctgaaaaacgagcattcaaagtacaaattactatatgtcacacctgaa
aaagtggcaaaaagcgattctctcttgaggcatctagaaaacttaaattctcgtggtttg
ctttctcgttttgttattgatgaagctcattgtgtgagccagtggggccatgactttcgg
ccagactaccagagtcttggtattctgaagcagaagtttcccggcattcccgtgttagct
ttaacagctacagcaacagccagtgtgaaagaagatgttgtacaagcccttggccttgtt
aactgtgttgtgttccggcaaagttttaatcgcccaaatctatggtattctgttgttccc
aagacaaagaagtgtctggaagatattgacaaatttattaaggaaaatcattttgatgag
tgtggaattatatactgtctttcaagaatggactgcgaaaaagtctctgaaaagttgcag
gagtttggtcataaagcagcattctaccatggcagtatggagcctgagcaacgtgccttt
gtacagacacaatggagcaaggacgaaatcaatataatatgtgctactgtggcatttgga
atgggaatcaacaagcctgatgtccgctatgttattcatcactcactcccgaagtctata
gaaggctatcatcaggaatgtggtcgtgctggcagagatggtcagaggtcatcttgtgtt
ttgtattatggttatggcgactatatacgagttaaacatatgattagccaaggaggagtt
gaccaaagccccatggcaactgggtataatcgtgtagcaagttcagggaggatacttgaa
acaaataccgaaaaccttctacgcatggtaagttactgcgaaaatgaggtggactgccgg
cgattcctacagctagtgcatttcggtgaaaaattcgattccacgaactgcaaaaagacg
tgtgataactgttgcagtactcagagtttgatagacaaagatgtcaccttgatcacaaag
caactggttgaactggtgaagcaaacaggagaaaggttttcttcagctcatattcttgaa
gtctacagaggttccttaaaccaaatggtcaagaaacacagacatgagactttgcagctg
catggagctggaaaacaattatcaaaacttgaagtttctcgtatcttgcactatcttgta
actgaggacattcttgtggaagatgttcggaaaagtgatatgtatggatctgtgtcatcg
ttgctcaaggtgaataacgcaaaggcttccgtactattttctggaagtcagactgtaatg
atgagattcccgtcttctgtaaaagtactaaagccaagtaaacccggggcaacccctgca
aaaggtccgctaacatcagagaagcaaagtactcttccactttccacagaagatgctcct
ccaaaagatttgaatctctccgccaacatgtacacagccttgaggaagcttcgtacagct
cttgtcaaagaagcccctgatggtgtcatggcatatcatatattcatcaattcaacacta
cagcagataagcagacgaattccgagaaccaaagaggaactccttgaaatcaatggcctt
gggaaggccaaagtaagcaagtacggtgatcggctgttggaaacaatagattcaacggta
aacgagtactgcggaaccaataagaaagactccataatcagcaacgacagtccccattca
gggaagaggagaagagacgagaacattagtccaaatgtagccgaggatgatgatttcgaa
gtgagcccaagtcagtcctgcaagaaaacagtgagaagcaaaagcaatgatgttcttcat
ggtgaatgtgcagatggagatcgagtaggcatggtaatggagaagcttgattttgatttc
gaagacgaagatgggtcagagatacgaccggagggaagagtattaccttggtga
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