Camelina sativa (false flax): 104744174
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Entry
104744174 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP214-like
KO
K14317
nuclear pore complex protein Nup214
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104744174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104744174
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104744174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
104744174
NCBI-ProteinID:
XP_019091187
LinkDB
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Position
14:complement(30903731..30913364)
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AA seq
1734 aa
AA seq
DB search
MSQFEIEEDVEGDRIPTNDFYFERIGEPISIKEDDAQFDLENPPSQPLAISERRGVVFVA
HSSGFFVGKTKDVISASKNSKEKDEKVYIEDLSLVDVPVGDVRILSLSSDDSILAVSVAA
DIHFFSVDSLLKKDAKPSFSHSPDDESGGFVKDFRWTRKDKHSYLVLSSSGKLFHGVDNA
PPRHVMDGVDAVEWSSKGSYIAVAQDDSLRILSSKFKEKRCIALSFDAWFGDSDEDCLVK
VDSIRWVRNNCILLGCFQLIEGREENYFVQVIRSPDGKISDGSSSLTALSFSDLFPCSMD
DLLPVGVGPHLLFSYIDQCKLAITANRKSIDEHIVVLDWSPGDNKSAVSVVDIDRETFLP
RIGLQENGDDNMIMGLCIDTVSVEGTVSVRSADDELKELLPYFVLVCLTLEGKLIMFNVA
SVAGPPASSDVDLASSSDIEDAYFGTSFGQPPLPLGYDTNKFAGFGPVVRVPEKLQNDTS
AQSKSMHLQANVKSKSTPALFGSPGLKNTFFQSPQNTPSQPWSSGQGVSPPDFVSSPFPS
VKDSQHKQSVQSGTGIVNPPMSIKEKPVQIIETGRASALSNLSPPLGQNRDANEEVEKIE
PIPSIHCSQLSQQVKSSFEKSASNQQHKTPLSTGPLRLDHSMKQPSNINEMAREMDTLYX
SIEGPGGFKDSCAFLLKSHVEELEQGLENLAGKCQTWKSTIHEQQAEIQHLLDKTIQVLA
KKTYMEGMYKQTADNQYWQLWNRQKLNPELEAKRQHIMKLNKDLTHQLIELERYFNRLEL
DRYHEDGGLPVARRGVPNRSAPSRRVQSLHSLHNTMSSQLAAAEQLSECLSKQMTLLKID
SPVKKNVKQELFETIGIPYDASFSSPDAVKAKNASSSKNLLLSSIPASINAQSRQRQSSA
MKSSDPETARRRRESLDRNWAAFEPPKTTVKRMLLHEQQKTGMNQQTVLSEKLRSANNLQ
ERSLLRLKDHASPVVSSNKGIMESFQQDTLEAQSTPFKTRPPMPQSNSPFTISPISASKP
SFNWSGNNSSSTTSYTEQSAPPQSKDTRTVSQPGGSNFPLKLPMASTVFEQTEKKAGGFK
FSEAKANAFVETAAGSVQRLSTSSSGSDFESSKGFGAQLSPMSTGAGASSFPSKSLFGFK
TSGSIPSDKVTFPAETVSVSSSPLPSTLLDSVSTLSTPSSPPVSSSTQDLVPASIPTSSK
PAPQTFSLTSTSTFSATGFSVPFGKSLTSANLDLNQAATATLSSSPGPTTGFTLNLPALS
PSSPEIISSSTGQSSLFPPSSTASQVSSNLVSARSFQTDSNRLLSSTSSSLTPLSTSTAP
DALQSPQVSTPSSAVSITEPVSESKPEAQSSSIPSTESTVDSVANATKTQIEPLPVKSEN
SKPETTEIPGSSSGFLSGFSSGTQSSLASMAPPSFSWPGSSQPQQLSTHVPFPVSSPTYA
SPFGEKKDTVDTQEDEMDEEASEASQTTELSMGSFGGFGLGSTPNPAAPKANPFGGPFGN
ATTTTSNPFNMTVPSGELFKPASFSFQNPQPSQPAGFGTFSVTPSQTPAQSGFGQPSQIG
GGQQALGSVLGSFGQSRQIGAGLPGATFGSPTGFGGSNPGSGLPNAPASGGCAAAGSSAT
GGFADMASAGRGFAGASSTPTGGFAALASGSGGFAGAAPGGGGGGFGGLGSGSGGFGGFA
PPSSGGFAGAAGGGGFGGFAGQGQGQSGGGGFSAFGGNSGATGKPSELFTQMRK
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatttgagattgaagaagatgtggaaggagatcgtatcccaacgaacgatttc
tacttcgagagaatcggcgaacctatcagtatcaaagaggatgatgctcaattcgatctc
gaaaaccctccgtcacagcctctcgctatctccgaacgccgcggcgtcgttttcgtcgcc
cattcctccgggtttttcgttgggaagactaaggatgtaatctctgcatcgaagaacagt
aaggagaaagatgaaaaggtttatatcgaggatttgagcctcgtcgatgttcctgttgga
gatgttcgtatattgtctctctcatcggatgattcgattcttgctgtctccgtcgctgct
gatattcatttcttctctgtggattcacttcttaagaaggatgcaaaaccttctttttct
cattcacctgatgatgagtcaggaggctttgttaaggattttcgatggacaaggaaagat
aagcattcgtatcttgttctttctagttctgggaagctctttcatggagttgacaatgca
ccccctagacatgtcatggatggtgttgacgccgttgaatggagttcaaaagggagttat
atcgctgtagcccaagatgacagcctgcggattttgtcgtcaaaattcaaggagaaacgg
tgcatagcactctcatttgacgcctggtttggtgattccgatgaagactgtttagtcaaa
gttgattctatcagatgggtacgcaacaactgtattcttcttggatgctttcagctgatt
gaaggcagggaagaaaattactttgttcaggttatcaggagtcctgatgggaagatttct
gatggttcgtccagtctaactgctttatcattctccgatttgtttccgtgttctatggat
gatcttcttccggttggtgttggacctcatttgctctttagctacatagaccaatgcaaa
ctggcgatcacagcaaacagaaagagcatagatgagcatattgttgtacttgattggtca
cctggtgataacaaaagtgcagtatctgttgttgatattgatcgagagacctttttgcca
aggattgggctccaagagaatggcgatgacaatatgattatgggactctgtatcgatacg
gtttctgtggagggaactgttagtgtccgttcggctgatgatgaacttaaagaactcctg
ccatattttgttcttgtgtgcctcactttggaaggaaaactgatcatgtttaatgttgct
agtgttgcaggacccccagcttcatctgacgttgatttggcctcttcttctgatatagaa
gatgcatatttcggaacaagttttgggcaaccacctttgcccttaggatatgacaccaac
aaatttgcaggattcggtcctgtcgtccgtgttcccgaaaagcttcaaaatgacacatct
gcgcagtctaagtctatgcatttacaggccaatgttaagtcaaagagtacaccagcttta
tttggatctcctggcctgaagaacacattttttcagtcaccacaaaatacaccatctcag
ccatggtcaagtgggcaaggcgtctcaccgccagattttgtatccagtccctttccttct
gtgaaagattctcagcataagcaatctgtacagtctggaactggtattgtgaatcctcct
atgagcatcaaagagaaacctgtacaaatcattgagactggtagagcatcagctctgagc
aatttaagtcctccgctaggccaaaaccgggacgctaatgaagaagtagagaaaattgag
ccaataccttctatccattgctctcaattgtcacagcaggtgaaatcttccttcgaaaaa
tccgctagtaatcagcagcacaaaactccgctcagtactgggcctctgagactcgaccat
agcatgaagcaacccagtaatataaatgagatggccagagaaatggatacgctttatnag
tccattgaaggaccgggtggtttcaaggattcttgtgcttttttactgaaaagtcatgtt
gaagaactggagcaaggacttgaaaatcttgctggcaagtgccaaacatggaagagcaca
atccacgagcagcaagcagagatccaacatcttcttgacaaaacaattcaagttttggca
aagaagacatacatggaaggtatgtataagcaaactgctgataaccagtactggcaactt
tggaaccgccagaagttgaatcctgagcttgaggccaagcggcagcatattatgaaacta
aataaggatttgacccatcaactaattgaactagagagatattttaatcggcttgaactc
gatcgctaccatgaggatggtggacttcctgtggcacgaagaggcgtgccaaatagatct
gctccttccagacgtgtgcaatcccttcacagccttcataatacaatgagttcccaattg
gcagctgctgagcaactctctgagtgtctctcaaaacaaatgacacttttgaaaatcgat
tcacctgtcaaaaagaatgtgaagcaggagttgtttgagacaattgggatcccttatgac
gcttctttcagttcaccagatgcggtaaaagctaaaaatgcatcttcatcaaaaaactta
ttactctcgtctattcctgcaagtataaatgcacagtcaagacaacgtcagtcatctgct
atgaaaagttctgaccctgagactgccaggaggagaagagaatcactagacaggaattgg
gctgcttttgagcctccaaaaacaactgtcaaaaggatgcttctgcatgagcaacagaag
acaggtatgaaccaacagacagtcttgagtgagaaactacggtctgcgaataatttacaa
gagcgatcactgcttcgcctgaaagatcatgcatcgcctgtagtctcctcgaataagggt
attatggagtcatttcaacaagacacattggaagctcaatcaaccccatttaaaacgagg
ccacctatgccacaatccaacagtccctttaccatctctccaatctctgcatcaaaacca
agtttcaattggtccggaaataattctagcagtacaacttcttatactgagcagtctgcc
ccaccacagagtaaggatacaaggacagtttcacaaccaggaggatcaaattttcctctg
aaactaccaatggcctcgactgtatttgaacagacagaaaaaaaggctggaggattcaaa
ttttctgaagctaaggccaatgcgtttgttgaaacagctgctggaagtgtgcagcggctt
tctacctcatcatccggatctgattttgaatcaagcaaaggttttggcgctcagctttca
ccaatgtctactggtgctggtgcatctagtttcccttcaaaatcgttgtttggtttcaaa
accagtggcagtatccctagcgataaagttacttttcctgctgaaacggtatcagtttct
tcttcacctttgcctagcacactgcttgattccgtttccaccttatctacaccatcatca
cctccagtgtcatcctctacacaagatttagttccagcatctattcccaccagctcaaaa
ccagcaccacagacgttttctctcacgtctacatctacattttcagctactggtttcagt
gttccatttggtaaatcgttgaccagtgccaatttagatctcaatcaagcagctacagca
acactttcttcatcacctggccccacaactggtttcactcttaacttaccagctttgtct
ccatcgtcccctgaaataatctcatcctcaacaggccaatcttcattatttcctccatct
tctacagcatcgcaagtgtcatctaatctggtctctgcacgcagcttccaaacggatagt
aatcgtttgctttcatcaacttcctcatctttgactccccttagtacctcaaccgctcct
gatgcgttgcagtctcctcaagtttccacaccgtcttccgccgtatccattacagagcca
gtctcagaatctaaaccagaggctcaaagttcgtcaattccaagtacggaaagtactgta
gattctgtagcaaatgcaacaaaaacacagattgagccgctaccggtgaaaagtgagaat
tcaaaaccagagactacagaaattcctggcagttcatctgggttcttgtctggattttca
tcaggaacacagtctagtcttgcaagcatggcgcctccttcattcagttggccaggtagt
tctcagccacaacagctatctacacatgtccctttccctgtgtcctcaccaacttatgca
agtccatttggtgagaaaaaagatactgtagatacacaggaagatgaaatggacgaagaa
gcttcagaggctagccagacaactgaacttagtatgggaagttttggaggtttcgggctt
gggtcaactccaaatccggctgcccccaaagcaaatccatttggtggtccctttggtaat
gctacaacaacaacaagtaatccattcaatatgacagtccctagtggcgagctattcaaa
cctgcatcgttcagttttcaaaatcctcaaccatctcaaccggcaggttttggtacgttt
tctgtaacaccttctcagacacctgctcagagcggatttggccaaccgtcacagattggt
gggggacaacaagctctagggtcggttcttggctcctttgggcagtcgagacagattggt
gctggtctcccaggagctacgtttggttctcctactggatttggtggctctaacccagga
agtggtctgccaaatgcaccagcatccggtggttgtgctgctgctggttctagtgccaca
ggtgggttcgcggacatggcttcagctggtagaggctttgcgggtgcttcttctactccc
acgggtggcttcgcggccttagcctcaggtagtggaggctttgctggtgctgctccagga
ggaggaggcggtggatttggtggacttggttcaggctccggaggtttcggaggctttgct
cctcctagtagtggaggtttcgcgggtgcagcaggaggtggtggttttggtggtttcgcc
ggccaaggacaaggccaaagcggtggtggtgggttctcagcctttggtggcaactcaggg
gcaacaggaaagccatcggaactcttcacacagatgagaaagtga
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integrated database retrieval system
