Camelina sativa (false flax): 104745131
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Entry
104745131 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 45-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104745131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104745131
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104745131
Spliceosome [BR:
csat03041
]
Complex A
U2 snRNP components
U2 related factors
104745131
Complex B
104745131
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas_Cas6_C
Motif
Other DBs
NCBI-GeneID:
104745131
NCBI-ProteinID:
XP_019092735
LinkDB
All DBs
Position
15:complement(3826433..3829852)
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AA seq
993 aa
AA seq
DB search
MKLLEKSKSSDDASLNKKYRRDRDRGTERKKENNISEKRRRSERVRRSDSQEEEDERIRS
RSRRRRERRISDSEEEEEEEEEEEEMDKKRRVKEDKERGHRERERDRKRGRKKHEKERSR
EGCNEDRDDDDDDDVKLDMKSSRTSRHGEIKTRKEEEEEEEEEVEDEQKQLDEEVVDKRR
RRVQEWQELKRHKEEAQSQSKGLDAAGKAWTLEGESDDDDDNADSEMDVDGGDAKMVDLE
NDNGGDIAADDDDDDDDVDPLDAFMNTMVLPEVEKLSNITSNDDFLDSRMNDKESGDHRE
NKGFNKALGRIIQGEDSDSDYDYSEPNDPSLDEDDEEFMKRVKKTKADKLSLVDHSKIEY
EPFRKNFYIEVKDISRMTQDVVNAYTRELELKVHGKGVPRPIKFWYQTGLTSKILDTLKK
LNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQFPVEAGDGPIGL
VMAPTRELVQQIHSDIKKFAKALGIRCVAVYGGSGVAQQINDLKRGTEIVVCTPGRMIDI
LCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNIRHDRQTVLFSATFPRQVET
LARKVLNNPVEIQVGGRSVVNKDITQLVEIRPESERFTRLLELLGEWYEKGKILVFVRSQ
DKCDALYNDLMTKYGYACLSLHGGKDQADRESAISDFKSTVCNLLIATSVAARGLDVKEL
DLVVNFDPPNHYEDYVHRVGRTGRAGRKGCAVTFLSEDDAQYAPDLVKALELSEQLVPDD
VKAVADGFMAKVKQGIEQAHGTGYGGSGFRFNEEEEEVRKAAKKAQAKEYGYEEEKSDSE
DENDGVRKAGSDISQQQAMLSQIAAIAAAAEATVTANQLLPNGGGLVTVEGVPPCDGAGR
VAAMAAAANLQHNLARILQADAMPEHYEPELEINDFPQNARWRVTHKETLGPISEWSGAA
ITVRGQYYESGSMPGPGQRKLYLFVEGPTEISV
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgttagagaaatctaagtccagcgatgatgcttctttgaacaagaagtatcgt
agagatcgtgatcgcggtacggagcggaagaaggagaacaacatttcggagaagagacga
cggtctgagagagttaggagaagtgattctcaagaagaagaagatgagaggatacggagt
cggagtcggagacggagagagaggaggattagcgattctgaagaagaagaagaagaagaa
gaagaagaagaggagatggataagaaacgcagagtgaaggaggacaaggaaagaggacac
cgtgaacgtgagagagatcggaaaaggggtaggaagaaacatgaaaaggagaggtcacga
gagggttgtaatgaagatagagatgatgatgatgatgatgatgtcaagcttgacatgaaa
agctcaagaactagcaggcatggtgagatcaaaacccggaaagaagaagaagaagaagaa
gaagaagaagtagaggatgagcagaaacagttggatgaagaagtagtagacaaacggagg
agaagagtccaggagtggcaagagctcaagaggcacaaggaggaagctcaaagtcaaagt
aagggtcttgacgctgctggtaaggcttggactcttgaaggagaatctgatgatgacgac
gacaatgcagactcagaaatggatgttgatggtggagatgccaagatggtagacttggag
aatgataatggaggtgacatagctgcagatgatgatgatgatgatgatgatgttgatcct
ttagatgcttttatgaatactatggtgttacctgaggttgagaagcttagcaatattact
tcgaacgatgattttttggattctagaatgaatgacaaggaaagtggtgaccaccgggaa
aacaaaggttttaataaggcccttggtaggataattcaaggtgaagattctgattctgat
tatgattattctgaaccaaatgatccaagtttagacgaagacgatgaggagttcatgaag
agagttaagaagactaaagcagataaattgtctcttgttgaccactccaaaatagagtat
gagcctttccggaagaacttctatatcgaagtcaaggatatctctaggatgacacaggat
gtagttaatgcttatacaagggaattggagctaaaagtacatgggaaaggtgtaccaaga
cccatcaaattttggtaccagaccggactaaccagtaaaatcttggatactttgaagaaa
cttaactatgaaaagccaatgcctatccaagcacaagcactcccaatcatcatgagcgga
cgagactgcattggggttgcaaaaaccggttcaggtaaaacccttggctttgttctgcct
atgttgaggcatatcaaagatcagtttcccgttgaagctggtgatgggccgattgggctt
gtaatggcaccaactagagaacttgttcagcagattcacagcgatatcaaaaagtttgcc
aaggcattgggtataagatgtgtggctgtgtatggaggatcaggagttgcccagcaaatc
aatgatcttaagcgaggtaccgagattgttgtttgtactcctggcagaatgatcgatatt
ctttgcacgagcagtgggaaaatcaccaatctgagaagggtcacatttttggtaatggat
gaagctgaccgtatgtttgacatgggttttgagcctcaaattactcgtattgtacaaaat
attcgacatgatcgtcaaactgtgctattctctgccacttttccacgccaggttgaaact
ttggcacgtaaagtcttgaacaatcctgtggaaatacaggttggtgggaggagtgttgtg
aataaagatattactcagttagttgaaatcagacccgagagtgagaggttcacaagactt
ttggaacttcttggggaatggtatgagaaaggaaaaattctggtctttgttcgttcacag
gacaaatgtgatgcattgtataacgatttgatgaccaaatatggttatgcctgtctatct
cttcacgggggtaaggaccaggctgatcgtgaatcagctatatctgattttaagagcact
gtctgcaatttgttgattgccacaagtgttgcagccaggggtctagatgtgaaagagctt
gacttggttgtaaactttgacccgccgaaccactatgaagactacgtgcatcgtgttggc
aggacaggtagggcagggcggaaaggctgtgctgtaacattcctctccgaggatgatgca
caatatgcaccagatttagtcaaggccctggaactatctgagcagcttgttcctgatgat
gtaaaagcagtggccgatgggttcatggcaaaagtgaaacagggtattgagcaagctcat
ggaactggctatggtggaagtggctttagattcaatgaagaggaggaggaagtcaggaaa
gcagcaaagaaagcacaagcgaaggagtatggctatgaggaagagaagtctgactcagaa
gatgagaatgatggagtaagaaaggctggtagtgatatctcacagcaacaagctatgctt
tctcagatagccgccattgctgctgctgctgaagctactgtgacagctaaccaattgctg
cctaatggtggcgggcttgttactgtggaaggtgtccctccttgtgatggagcaggccgc
gttgcagccatggctgctgccgctaacctgcaacacaaccttgcaaggattcttcaagct
gatgcgatgcctgaacactatgaaccagaattggaaatcaatgattttccacaaaatgct
cggtggagagtcacccacaaagaaacgcttggtccaatatcagagtggagtggagccgcc
attaccgttagaggtcagtattatgagtcaggaagtatgcccggacctgggcaacgcaag
ctttatctgttcgttgaagggcctaccgaaatatctgtttag
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