Camelina sativa (false flax): 104750155
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Entry
104750155 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP98B-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104750155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104750155
03036 Chromosome and associated proteins [BR:
csat03036
]
104750155
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104750155
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104750155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
104750155
NCBI-ProteinID:
XP_019093965
LinkDB
All DBs
Position
16:complement(8213620..8226647)
Genome browser
AA seq
949 aa
AA seq
DB search
MFGSSNPFGQSSNNNPFGTQTQSLFGQTNNPSNNPFAVKPFGNSTPFGAQTGSSMFGGTS
TGVFGAPQTSSSPFGASSQAFGSSTPAFGASSAPAFGSSTSPFGGTSTFGQKSFGLSTPQ
SSPFGSTPQQSQPAFGNSSFGSSSPFGASSTPAFGASSTPAFGASSTPAFGASSTPAFGA
SNTSAFGASNTSAFGATGTPGFGASSTPAFGASSTPAFGASSTPSFSFGSSPSFGQSTSA
FGSSAFSSTQSPFGAQGAQASTPIFGGQTTSGGQQGGSRVMPYAPTTEVESGTGSNPGRL
QSISAMPVYKEKNQEELRWEDYQRGDKGGQRPPGQSPGGAGFGVTTSQPSVFSPSPTFGQ
TSTNPTNPFAQKTLTTTPNFPSPFGQPTTPTFGQPTTPSFGQPTTPSFGQPTSPSMFGST
ASNATSVFGSSPSFATSTQQPFGSAPAHGSNSAFSMGGNNNNSQSSPLFGSNPLFGQSTT
PTFQQTSSAFGLNTTPTFQQTSSVNGQNTNPANGQSNIFSTPSTGSANLFSSSFTTSISP
YGQTTPALSTPYQSVQPTQPSGAFSFNNFAQTQTAYTSGVTGGTGNLSQSNFKQVPAFGN
SAIMQPTPVTNPFGTLPALPQVSIGHGRNSPSIQYGISSMPVVDKPAHVRVSPLLTSRHL
LQRRVRLPTRKYRPGDDGPKVPFFSDEENSSTPKADALFIPRENPRALFIRPVERVKSEH
RKDGPAPLQENGNKSNGVTNGANHENKNNGETCEAPPVKANQKPNGTHENHGGDKNGSHS
SPSGTDIETLMPKLHHAEYFTEPRIQELATKERVDPGHCKRVKDFVVGRHGYGSIKFLGE
TDVCKLDLEMVVQFKNREVNVYMDESKKPPVGQGLNKPAVVTLLNIKCMDKKTGTQVKEG
ARLDKYKEMLKRKAEEQGAKFVSYDAVKGEWTFKVEHFSSYKLGEEDDM
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcttctaatccttttggacagtcatctaacaacaatccatttgggacccaa
actcaatctttgtttgggcagaccaataacccgagcaataatccttttgctgtgaagcct
tttggtaattctactccttttggcgcacagacagggagttccatgtttgggggcacttca
accggcgtgtttggtgcacctcaaacttcttcttccccttttggtgcttcatcacaagcg
tttgggagctctactccggcttttggagcatcttctgctcctgcatttggtagttcaact
tcaccttttggtggcacttctacgtttggtcaaaagtcttttggcctctcaacgcctcag
tcaagtcctttcggaagcaccccacagcaatcacagcctgcctttggaaacagctctttt
ggttcatcttcaccttttggtgcctctagcacgcctgcctttggtgcctctagcacgcct
gcctttggtgcctctagcactcctgcctttggtgcctctagcacgcctgcctttggtgcc
tcaaacacttccgcatttggcgcctcaaacacttccgcgtttggagccacaggcacacct
gggtttggcgcatcaagcactcctgcctttggtgcatcaagcactcctgcgtttggtgca
tcaagtaccccatcttttagttttggctcttccccatcctttggacagtctacctcagca
tttggtagcagtgcctttagctctacacaatctccctttggagcccaaggtgcacaggct
tcgaccccaatatttgggggtcaaacaactagcgggggtcaacaagggggtagtagggtc
atgccttatgcacctacaactgaggtagagtcaggcactggtagtaaccctgggaggcta
caatctatatctgccatgcctgtatacaaagaaaaaaaccaggaggagcttaggtgggag
gactaccagcgaggagataaaggtggacaacgtcctcctggtcaatctcctggaggtgct
ggattcggtgtaacaacttctcagccaagtgtattctctccttcaccaacgtttggccag
acatctacaaatccaacaaacccttttgcacagaagactttaacaactaccccaaatttt
ccctctccctttggtcaacccactacccccacctttggtcaacccactaccccatccttt
ggtcaacccactaccccatcctttggtcaacccactagcccatccatgtttgggtcaact
gcatcaaatgccacatccgtttttggatcatcccctagttttgcaacaagcacacagcag
ccatttggttcagcccctgcacatgggtcaaattcagcatttagcatgggtggaaataat
aacaacagtcagtcatctccgctgttcggttcaaaccctttatttggacagagtactact
cctacatttcaacagactagttctgcgtttggactgaataccactcctacatttcaacag
actagttctgtgaatggacagaataccaatcctgcaaatggacagagtaacattttcagt
acaccttccactggctccgcaaatctgttttcaagctctttcactacaagcatctctccc
tatggtcaaacaacgcctgctctttcgacaccttaccaatcagttcagccaactcaacca
tcaggtgcttttagtttcaacaactttgctcaaacccaaacagcttatacatctggcgtt
acaggtggaacgggaaatttgagccaaagcaactttaagcaagtgcctgcgttcggtaac
tctgctattatgcaaccaactcctgttacaaacccatttggaacgcttcctgctttgcct
caggtttcaattggtcatggtaggaattcaccttccattcagtatggaatctccagcatg
cctgtcgttgataagcctgctcatgtaagagtatctccactcctgacttctcgacacctt
ttacaaaggcgggtcaggctacctacaaggaagtaccgtcctggtgatgatggtccaaag
gttccattcttcagcgatgaagagaattccagtacaccaaaggctgatgcccttttcatt
ccaagggaaaaccctagagctttatttatacgcccagttgaaagggtaaaatcagaacat
cgaaaggatggcccggccccactgcaggagaatggtaataagtcaaatggggttactaat
ggggccaaccatgagaataagaataacggtgaaacttgtgaggctcctccggttaaagcc
aatcagaaaccgaacggaacacatgaaaatcacggaggcgacaaaaacggttcacacagt
tcaccaagcggaacagatatcgagacattgatgccgaagctgcaccacgctgaatatttc
acagagcctcggatccaagaactggctacaaaagaaagggttgatccgggtcattgcaag
cgggtaaaggactttgttgttgggagacacggttacgggagtataaagtttctgggagag
acggatgtgtgtaaactcgacctggaaatggtggttcagttcaaaaaccgagaagtgaat
gtgtacatggacgagagcaagaaacctcctgtgggtcaaggactgaataagcccgccgtt
gtaactttgctgaacataaaatgtatggacaagaagaccggtacgcaagtgaaggaaggc
gcgagattggacaagtacaaggaaatgctgaagaggaaagctgaggaacagggagctaag
tttgtgtcctatgatgctgtgaaaggcgagtggacgttcaaggtggagcatttcagttcc
tacaagcttggagaagaagatgatatgtag
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