Camelina sativa (false flax): 104751391
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Entry
104751391 CDS
T05044
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104751391
Enzymes [BR:
csat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
104751391
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104751391
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
104751391
NCBI-ProteinID:
XP_010471624
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Position
16:complement(19961033..19964136)
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AA seq
650 aa
AA seq
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MSATSSLRARLAFVALLSATTFYCIHKYRRLKRLKNLSLNPSSTTSKPTTRGKIFFISQT
GTAKALAQRLHELCASNDMAFDLIDPRGYEPEDLPKETLVIFVASTWDGGMPPKNGEFLV
NWLGESAEDFRVGSLLLSDCKFGVFGVGSRAYGKSYNAVAKELSSQMTGLGGLEMIPVGE
GDVDDGELDKSFQEWCDGVIRVLKGGSAQETNGVSQQIDAVENDLEYYDSTDDEDEDNDG
DDGGLVDLEDIAGKAPSKRNGLVKVAKVDGKKEMVTPVIRASLTKQGYKIIGSHSGVKIC
RWTKSQLRGRGGCYKHSFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGKSWQWKMDE
PSVIVKGALDLHTKMIKQMKGVPGVTPEKLQEGLNPRHCALSLVGEPIMYPEINALVDEL
HGRRISTFLVTNAQFPEKILMMKPITQLYVSVDAATKESLKAIDRPLFADFWERFIDSLK
ALQEKQQRTVYRLTLVKGWNTEELDAYFNLFSIGKPDFIEIKGVTYCGSSATSKLTMENV
PWHADVKAFSEALSLKSKGEYEVACEHAHSCCVLLGRTEKFKLNGKWFTWIDYEKFHDLV
ASGEPFTSTDYMAETPSWAVYGAEEGGFDPEQLRYKKERHHHPKPQAVLA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgacttcgtccttgcgtgctcggctagctttcgttgctctactctcggcgacg
actttttactgtatccacaaatatcgccgcttgaagcgtctcaaaaacctctccttaaac
cctagctctactacttcgaaacccactacaagaggaaagatcttcttcatctcccaaact
ggtacagctaaagcgttagctcaacggcttcacgagctctgcgcatctaatgacatggca
tttgatctcatcgatccacggggctacgagcctgaagatctccccaaagaaaccctagtt
atattcgtcgcgtcgacttgggacggtggtatgccgcctaagaacggggagtttctcgtc
aactggcttggcgagagcgccgaggatttcagagttggctcgcttcttctctccgattgc
aaattcggcgtattcggtgtcggtagccgtgcgtatggtaaatcttataacgctgtggca
aaggaattgtcgagtcagatgacaggattgggtggactcgagatgattccggtgggagaa
ggtgacgttgatgacggagaattagacaaatcatttcaagaatggtgtgatggagttatc
agggttctgaaaggaggttctgctcaagaaacaaatggggtttcgcagcagattgatgct
gttgagaatgatcttgagtattacgattcaacagatgatgaagatgaagacaatgatggt
gacgacggaggtcttgttgatcttgaagatattgctggaaaagctccttcaaagagaaat
ggcttagttaaagtggctaaagttgatggaaagaaagaaatggtgacccctgtgattaga
gcaagcttaacgaaacagggctataaaatcatcggttcgcatagcggggttaaaatatgt
agatggactaagtcacaacttagaggcaggggaggttgctacaagcactccttttatggc
attgagagtcacaggtgcatggagacaacacctagtttggcttgtgcaaacaaatgtgtc
ttttgttggaggcatcacactaatcctgtggggaagagctggcagtggaagatggatgag
ccttcagtgattgtgaaaggtgctctagatcttcatacaaagatgattaagcaaatgaaa
ggagttccaggtgtaactccggagaaattacaagaaggtctaaacccaagacattgtgcg
ttatcacttgttggtgagccaattatgtatccggagatcaatgcccttgtagatgagcta
catggaaggcgcatttctacttttttggttactaatgcacagttccctgaaaaaattctg
atgatgaagcctatcacgcagttgtacgttagtgtagatgctgccaccaaagagagcttg
aaagctattgacaggcctctctttgcggacttctgggaacggtttattgactccttgaaa
gctctccaggaaaagcagcagcgaactgtataccgtttaacacttgtcaaaggatggaac
acagaggagctagatgcttatttcaaccttttcagcattgggaaacctgatttcatcgag
atcaaaggcgtcacatattgtggatcatctgcgacatcaaagttgacgatggagaatgta
ccatggcacgcagacgttaaagcattctcagaagcgctgtctctgaagagcaaaggggag
tacgaggttgcttgcgaacacgcccattcttgctgtgttcttctagggaggactgaaaag
ttcaaattgaatggaaagtggttcacttggattgactatgaaaagttccacgatctggtg
gcttctggagaaccgttcacgagcacagactatatggctgaaacaccatcatgggcagtt
tatggagcagaggaaggtgggtttgatccagagcagttgcgttacaagaaggaaaggcat
caccatcctaaaccacaggcggttttagcttaa
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