Camelina sativa (false flax): 104752472
Help
Entry
104752472 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104752472
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104752472
Spliceosome [BR:
csat03041
]
Complex C
Other components
Complex C specific factors
104752472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
104752472
NCBI-ProteinID:
XP_010472922
LinkDB
All DBs
Position
16:25677866..25680404
Genome browser
AA seq
588 aa
AA seq
DB search
MEDDDDYVEYVPVAKRRAIEEQKILQRKGKASELEEEEAEKDKLAEAKPSLLVQATQLKR
DVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRRMSSK
QRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAG
RDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAPGEGPIGLIVCPSRELARQTYEVVE
QFVAPLVKAGYPPLRSLLCIGGIDMKSQLEVVKGGVHIVVATPGRLKDMLAKKKMSLDAC
RYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNV
GRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVE
AVAIHGGKDQEDREYAISSFKAGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVH
RIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETIAN
ASGVKGCAYCGGLGHRIRDCPKLEHQKSVAISNSRKDYFGSGGYRGEI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgacgatgattacgttgagtatgttccagtggcgaagcgtagagcaatcgaa
gagcagaagattcttcagcggaagggaaaagcttctgaattagaggaagaagaagctgaa
aaggataagctcgctgaagctaaacctagtttactcgttcaagcaactcagctcaagcga
gatgtacccgaagtcagtgctactgagcaaatcatcttacaagagaaagagatgatggag
catctttccgataagaagacgctcatgtctgttcgtgaactcgccaaaggtatcacttac
actgagcctctcttaactggctggaaacctcctttgcatattaggaggatgtctagtaaa
cagagagatctgattaggaagcaatggcatattattgttaatggcgatgacatccctccg
cctatcaaaaacttcaaggatatgaagtttcctagacctgttctcgatacgctcaaggag
aaaggaattgtgcagcctactcccattcaagttcagggtcttcctgtgatcttggctggg
agagatatgattgggattgccttcactggttctggaaagactttggtttttgtgcttcct
atgatcatgattgctcttcaagaagagatgatgatgcctattgctcctggagaaggtccc
attgggcttattgtttgtccctctagagagcttgctaggcagacttatgaagtcgttgag
cagtttgtggctcctttagttaaagctggatacccgccgttgaggtctttgttatgtatt
ggaggtattgatatgaaatcccagttggaggttgtcaagggaggtgtccacatcgttgtt
gctacccctgggaggttaaaggatatgctcgccaagaaaaagatgagcttagatgcttgc
aggtacctgacgctagatgaagcagataggttggttgatttgggtttcgaagatgacata
agggaagtctttgatcactttaagtctcaacggcaaacacttttgttttctgccacaatg
cccacaaaaattcaaatctttgccagaagtgctctggtgaaacctgtgactgttaatgta
ggaagagctggagctgcgaatcttgatgtgatccaggaggtagaatacgtcaaacaagaa
gcaaagattgtttacctcctcgagtgtctacagaaaacctctccaccggttttaatattc
tgtgagaacaaagctgatgttgatgatattcacgagtacttgttactgaaaggagtggaa
gcagtggccatccatggaggaaaagatcaagaagacagagagtacgcaatctcttcgttt
aaggctgggaagaaagatgtcttggtcgcaactgatattgcttcaaagggtctagatttc
cctgatatacaacatgtcatcaactatgacatgccagcagagattgagaactatgtgcat
aggataggacgaacaggtcggtgtggtaaaactgggatagcaactacatttataaacaag
aatcaaagcgaaaccacactgctcgatttgaaacacttgttgcaagaagccaaacagagg
attccgcctgtccttgctgagctgaatgatccaatggaagaagcagagaccattgcaaat
gcaagtggtgtcaagggttgtgcgtattgtggtggtcttggacatcgtattcgagactgt
ccaaaacttgagcaccagaagagtgtggccatatctaattctagaaaagactattttggc
tctggtggctacagaggagaaatataa
DBGET
integrated database retrieval system
