KEGG   Camelina sativa (false flax): 104762872
Entry
104762872         CDS       T05044                                 
Name
(RefSeq) general transcription factor IIH subunit 2-like
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
csat  Camelina sativa (false flax)
Pathway
csat03022  Basal transcription factors
csat03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104762872
  09124 Replication and repair
   03420 Nucleotide excision repair
    104762872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104762872
   03400 DNA repair and recombination proteins [BR:csat03400]
    104762872
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     104762872
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     104762872
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 Tfb4 IBR
Other DBs
NCBI-GeneID: 104762872
NCBI-ProteinID: XP_019098832
LinkDB
Position
3:complement(1976532..1978774)
AA seq 421 aa
MSNQRKRLTGEREDEDDEDAEGIGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQY
RRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRIAVMAKHVEAFIREFFD
QNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVNEHLSQV
PSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLY
SVAVDEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAGY
MCPRCKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPAFSSLNDSRRTLGK
SCFGCQQSLIGTGNKPGQCVTCRKCKHYFCLDCDIYIHESLHNCPGCESIHRPKSVSLME
E
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagtaatcaaagaaagaggttaaccggagaaagagaggacgaagacgacgaagatgca
gaaggtatcggcgagtgggaaagagcttatgttgacgacagatcctgggaggaattgcaa
gaagacgagtctggacttttacggccaattgataacagcgctatttaccatgctcagtat
cgtcgccgtctccgcatgctctccgccgctgctgctggtactcgtatccagaaggggctt
attcgctatctctacatcgtcattgacttctcccgggcagctgcggaaatggatttcaga
ccaagccggatagccgtcatggcaaaacatgttgaagctttcattagagagttctttgac
cagaatcctctgagtcaaatcggtttagtgtctatcaaaaatggagttgcccatacttta
actgatcttggtggtagtcctgagactcacataaaagcgttgatggggaagttggaagcc
ttgggtgactcctctttgcagaacgcactggaacttgtgaatgagcatctcagccaggtt
ccatcttatggtcatcgcgaggttctgatattgtactcagctttatgcacttgtgatcct
ggcgatatcatggagactattcaaaaatgcaagaagtccaaattaagatgttctgtaatc
gggctttctgcagagatgttcatatgtaaacacctctgccaagaaactggcggattgtat
tccgttgcggtggatgaggtgcacctaaaggatcttctactcgaacatgcccctccacct
ccggcaatagcagaatttgcaattgcaaatttgatcaagatgggtttcccacaaagagct
gccgagggttcaatggcaatctgttcatgtcataaggaagtcaagattggagctggttat
atgtgcccgagatgcaaagctagggtgtgtgacctacctacagaatgcactatctgcggt
ctaacacttgtctcatcgccacatttagcgagatcataccatcatctcttcccaatagct
ccatttgatgaggtgcctgctttttcaagtctgaatgattctcggagaacattgggaaag
agttgttttggctgccaacagagcctaattggtacagggaataagcccggccaatgcgta
acatgtcgtaaatgcaagcactatttctgtctggactgcgacatatacatccacgagagc
ttacacaattgtcctggctgtgagagtatacaccgtcccaaatcagtctccttgatggaa
gaatga

DBGET integrated database retrieval system