Camelina sativa (false flax): 104768860
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Entry
104768860 CDS
T05044
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104768860
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csat01002
]
104768860
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104768860
Enzymes [BR:
csat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104768860
Peptidases and inhibitors [BR:
csat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104768860
Ubiquitin system [BR:
csat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104768860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
ubiquitin
SASP
Motif
Other DBs
NCBI-GeneID:
104768860
NCBI-ProteinID:
XP_010491234
LinkDB
All DBs
Position
20:complement(2686104..2695888)
Genome browser
AA seq
1120 aa
AA seq
DB search
MTMMTPPPVDQPEDEEMLVPNSDLVEGPAQPMEVDASVVTQPETAVSTVENQPAEDPPSL
KFTWTVPNFSRQNTRKHYSEVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWS
RYAQFSLAVVNQIHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLV
EAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN
DAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVE
VERLEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL
ELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLTDQWYKFDDER
VTKEDLKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRDSDKDKIICNVDE
KDIAEHLRVRLKKEQEEKEDKRRYKAQAHLFTIIKVARDEDLKEQIGKDIYFDLVDHDKV
RSFRIQKQTPFQQFKEEVAKEFGIPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQI
REASNKANTAELKLFLEVEHLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKS
SSKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQ
KPLVNKEIECRYPAVPSFLEYVQNRQLVQFRALEKPKEDEFVLELSKLHTYDDVVERVAE
KLALDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPE
LQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYH
KIYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFG
EPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDIVYNRFQRR
DVYGAFEQYLGLEHTDTTPKRAYAANQNRHAYEKPVKIYN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccgcctcccgttgatcagccagaagatgaggagatgcttgtgccg
aattcagatttggtcgaaggtcctgctcagcccatggaagttgatgcatctgtagttacc
caacctgagactgctgtgagtactgtggagaaccagccagctgaggatcctcctagtctg
aaattcacgtggactgtcccaaatttctctaggcaaaacacaaggaagcattactctgaa
gtatttgtcgttggaggttacaaatggcgcatattaattttcccaaaagggaacaatgtc
gaccatttgtccatgtacttggatgtttctgatgctgcgagtttgccctacggttggagt
agatatgctcagttcagtttggctgtagtcaatcaaatccacaccagatataccattaga
aaagagacgcaacatcagttcaatgcaagagaaagtgattggggatttacatcattcatg
cctcttagtgaactctatgatcctagtagaggatatttagtgaatgatactgttttggtt
gaagctgaagtcgctgtacgtaaggttcttgattactggtcatatgactctaaaaaagag
actggttttgttggactcaagaaccaaggtgcaacttgttacatgaattctctcctacag
acactataccacataccttacttcagaaaggctgtataccacatgccgacaactgagaat
gatgcacccacagcaagtatacctttggctctccaaagtttgttttacaagctccaatat
aatgacactagtgttgcaacaaaagagctgacaaagtcgtttggttgggatacatatgat
tctttcatgcaacatgatgtgcaagaactcaatcgagttctctgcgaaaagcttgaggac
aaaatgaagggaactgttgtggagggaacaatacaacagctatttgagggccaccatatg
aattatattgagtgcataaatgtagatttcaaatctactcggaaagaatcattttacgac
cttcagctagatgttaaaggctgcaaggatgtttatgcttcttttgacaagtacgttgag
gttgaacgtcttgaaggagacaacaaatatcatgcagaaggacatggtttacaggatgca
aaaaaaggtgttcttttcattgactttccaccggttcttcaactccagctcaagaggttt
gaatatgactttatgagggacaccatggtgaagataaatgatcggtatgagttccctctt
gaactggatcttgatagagaagatggaaagtatctatctcctgatgctgacaggagtgtc
cgcaacctttatactcttcacagtgtcttagttcatagtggaggagtacatggtgggcac
tattacgcttttataaggcctacactcacagatcagtggtataaatttgatgatgaacga
gtaaccaaggaagatttgaaaagggcattggaggagcaatatggtggtgaagaagagctc
ccacagactaatcctggtttcaataaccctcctttcaaattcacaaagtactcaaatgca
tacatgcttgtatacatccgggacagtgacaaagataaaataatctgcaacgttgatgag
aaagacatagcagaacatttaagggtgaggctgaagaaagaacaagaagaaaaggaagat
aaaagaagatacaaggcacaagctcacctatttactataatcaaggttgcaagagatgaa
gaccttaaggaacaaattgggaaggatatatattttgatcttgtggatcatgacaaagtt
cgcagtttccggatccagaaacagacaccatttcaacaatttaaggaggaggtagccaaa
gaatttggaatacctgttcagttacaaaggttctggatttgggcaaagcgacaaaatcat
acataccgtcctaatcgcccccttacgcctcaggaagaattacaaccggttggacaaata
agagaagcatctaacaaggcaaacaccgcagaactaaagctttttctggaagtagagcac
ctggatttacgtcctatccctcctcctgaaaaatcaaaagaagatattcttcttttcttt
aagctatatgaccccgagaaggcagtattaagctatgctggcaggctgatggtgaaaagt
tccagtaagcctatggatataactggaaaactgaatgaaatggttggctttgcccctgat
gaagaaatagaactttttgaggaaatcaagtttgaaccttgtgttatgtgcgaacacttg
gataagaaaacttcattcagactgtgtcaaattgaagatggagatatcatttgcttccag
aaacctctagttaataaggaaattgaatgccgatacccagctgtgccttcgtttcttgaa
tatgtccagaatagacagctggtccagtttcgtgctctggaaaaacctaaagaagatgag
tttgttctggagttgtcgaagctgcacacttatgacgatgtggtggaaagagtggctgag
aaacttgctcttgacgatccatccaaacttaggctcacatctcacaattgctattctcag
caacccaagcctcagcctatcaaataccgtggagtagaccatttgtcagatatgttggtt
cactacaatcagacgtcggacattttatattatgaagttctggacattcctcttccagaa
ttgcaaggtcttaaaaccttaaaagttgctttccatcatgccacgaaggaagaagtagta
atccacaacatcagactacctaaacaaagcacggtcggagatgttattaatgaacttaaa
acaaaggtggagctttcgcatccggatgcagaactgagattgcttgaggtgttttaccac
aaaatctacaagattttcccgtcaactgaaagaattgagaatataaatgaccagtactgg
actttacgagctgaggagattccagaagaagagaagaacatcggtcctaatgatcgctta
attcttgtataccactttgctaaggagactggacaaaatcagcaagtgcaaaactttggt
gaacccttcttcttggtaatccatgaaggtgaaactcttgaagaaatcaagaaccgtatc
caaaagaagcttcatgtatccgatgaggactttgccaagtggaagtttgcgtttatgtca
atggggcgtccagagtacttgcaggacacagatattgtttataatcgatttcagagaaga
gatgtctatggtgcttttgagcagtacctggggttggagcacactgacactactcctaag
agggcttatgctgcaaaccagaaccgacacgcatatgagaagccggtgaaaatatacaat
tag
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integrated database retrieval system
