Camelina sativa (false flax): 104769841
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Entry
104769841 CDS
T05044
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104769841
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104769841
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
ORF6C
ABC_tran
AAA_25
AAA_27
HSBP1
AAA_13
Motif
Other DBs
NCBI-GeneID:
104769841
NCBI-ProteinID:
XP_010492452
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All DBs
Position
20:7258913..7263723
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AA seq
1052 aa
AA seq
DB search
MSERRAKRPKISRGEDDFLPGNIIEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSLV
CAIALCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLRGNTNEENFTISRKIDTRNKSEW
MFNGNATSKREVVEIIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLP
VHHRQLVDKSRELKQLERAVEKNGETMNQLKALVDEQEKDVERVRQRELFLTKVDSMKKK
LPWLKYDMRKAEYMDSKKRMKEAQKKLDDAARNLNSMKEPIEKQKKDKAVIDSNCKKVKN
LLDANGRNRGNLLEKEDEAEARVVATYKELEELKKQEEHRQERILKATEDLVAAERELQD
LPVYERPVAKLEELSSQITELHQSINRKKSQKEDNERLLSQKRFTLRQCVDKLKDMENAN
NKLLNALQRNGAERIFDAYQWVQQNRHEFKKEVYGPVLVEVNVPNRENACYLEGHVPFYV
WKSFITQDSEDRDFLVRNLRRFDVPVLNFVGEGGNQKASFHISDQMRSLGIHARLDQIFD
APDAIKEVLTSQFGLDDSYIGSKITDQRAEEVSKLGVRDFWTPDNHYRWSSSRYGGHSSA
SVDSVYPSRLLLCGVDVGELEKLRSRKEELEDAISSIEETLKSLQTEQRLFEEEAAKLQK
EREEIVNVSLLEKKKRRDLETRYQQRKMKLQSLEQEEDLDASVAKLIDQASRANADRYTY
AMNLKKLLVDSVAHRWSYTEKHMASIELERKIRESEVNIKQYEKVAQQLSVSVEYCKKEV
EGKQVQLAAAKRNAESIATITPELKKEFVEMPTTIEELEAAIQDNMSQANSILFVNENIL
QEYEHRQKQIETISTKLEADKRDLSKCLKDIDSLKEKWLPTLRQLVAQINETFSHNFQEM
AVAGEVSLDERDTDFDQYGIHIKVKFRESGKLQVLSSHHQSGGERSVSTILYLVSLQDLT
NCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNI
MNGPWIEQPSKVWSFGGSWGNLMRRNEASQCS
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacgtcgtgctaagcgtcccaaaatctccagaggggaagatgattttttacct
gggaatattatcgaaatcgagcttcacaatttcatgacgtttaatcacttggtatgcaaa
cctggatcacgtttgaaccttgtaattggaccaaacggatcaggtaagagttctcttgtc
tgtgccattgcactttgtcttggtggtgagcctcagcttcttggtagagcaaccagtgtt
ggtgcatatgttaagcgtggtgaagattctggttatgtcaagatctctcttagagggaac
accaacgaagaaaattttacgatttctcgtaagattgatactcgtaacaagtcggagtgg
atgttcaatggaaacgcaactagtaagagggaagtggttgagatcatccagaagtttaac
atccaagttaacaatcttacgcagtttctgccacaagacagggtttgcgagtttgctaag
ttaactcctgtgcagcttttggaggagacagaaaaagctgttggtgatcctcagttgcca
gtccatcatcgccagcttgttgataaaagccgtgaactgaagcagcttgagagagctgtg
gagaaaaatggggagacgatgaatcagcttaaggctcttgttgatgagcaagagaaggat
gtggaacgtgttaggcagagagagttgtttttgaccaaggttgattctatgaagaagaaa
ttgccatggcttaagtatgatatgagaaaggctgagtacatggattctaagaagagaatg
aaggaagcgcagaaaaaattggatgacgctgcaaggaatttgaacagcatgaaggaacct
attgaaaagcaaaagaaggataaagctgtgatagattcaaactgcaaaaaggttaagaat
ctcctggatgcaaatggaagaaaccgtggtaacttgctcgagaaagaagatgaggcagaa
gcacgtgtagtggcaacatacaaagaactggaggaattgaagaaacaagaagagcatcgc
caagaaaggattctgaaagctactgaggatctggttgctgcggaacgagaactccaagat
ctgcctgtatatgaacgtcctgtagccaaacttgaagaattgagctctcagattacagag
ctgcatcagagcattaaccgaaagaagagtcagaaggaggacaacgagaggcttttgtct
cagaagagattcaccctgaggcagtgcgtagataagttgaaggacatggagaatgcaaat
aacaaactcttaaatgcgctacagagaaatggagctgaaaggatatttgacgcatatcaa
tgggtgcaacagaatcgtcatgagtttaaaaaggaagtatacggtcccgttttggtagag
gttaacgttccaaatcgagagaacgcttgctatttggaaggtcatgttcctttttatgtc
tggaagtcttttatcactcaagattccgaggaccgtgatttcctggttagaaatctaaga
cgattcgacgttcctgttctgaactttgtgggcgaaggcggcaatcaaaaggcttccttt
catatttctgatcagatgcgttctcttgggatccatgctcggcttgatcaaatatttgat
gctcctgacgccatcaaggaggttttaacttcccagtttggtctggatgactcgtacatt
ggatcgaagattactgatcagagggctgaagaagtctccaagttgggtgttagagatttt
tggacaccggacaatcactaccggtggtcttcctcaaggtatggtggtcattcctctgca
agtgtagattctgtatatccatcacgtcttttattatgtggggtggacgttggggagctt
gagaaactgagatcaagaaaggaggagttagaagacgctatttcatccattgaggaaact
ctcaagagtcttcaaacagagcaaagacttttcgaagaagaagccgctaaacttcagaaa
gaaagggaggagatagttaatgtttcgcttctggagaagaaaaaacgccgcgacttggaa
acgcgttaccagcaaaggaagatgaagctacaatccttggagcaagaggaggacttggat
gcttcagttgctaagctgattgatcaggcttccagagctaatgctgaccgctatacatat
gcgatgaatctcaagaaattgctcgtggattctgttgctcataggtggagttacaccgag
aagcatatggcttctattgaattggaaagaaagatcagagagtcggaagtcaatatcaaa
caatatgagaaagtggcacagcagctatctgtcagcgttgagtattgtaagaaagaggta
gaaggaaagcaggtgcagctagcagctgccaagaggaatgcagaatctattgcaaccatc
acacctgaacttaaaaaggagttcgtcgagatgcctaccacaattgaagaattggaagcg
gctatacaagacaatatgtctcaagccaattcgatccttttcgtaaacgagaacatactg
caagagtatgaacatcgccagaaacagatagaaactatttctacaaagctggaagctgat
aaaagagatctgagcaaatgcttgaaagatatcgattcgctaaaggagaaatggcttcca
acattgagacagcttgttgctcagataaatgaaactttcagccacaactttcaagaaatg
gcagttgcaggagaagtttcattggatgagcgtgacaccgactttgatcaatacggaata
catatcaaagtgaaattcagggagtcagggaaactacaggttctaagttctcaccaccaa
tctggaggagagcgttctgtctcaactatcctttacctcgtctctcttcaagatctgaca
aactgtcctttcagggttgttgatgagattaatcaaggtatggatcctataaacgaaagg
aagatgtttcaacaattagttagagctgcaagccaaccaaacacaccacagtgcttctta
ctgaccccaaaactcttgccggagctagaatacagtgaagcatgtagcattctgaacatc
atgaacggtccttggatcgagcagccttcaaaagtttggagctttggtggcagttggggc
aatctcatgagacgaaacgaagctagtcaatgctcttaa
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