Camelina sativa (false flax): 104769963
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Entry
104769963 CDS
T05044
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104769963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104769963
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104769963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp13
NBCH_WD40
ANAPC4_WD40
Nup160
WD40_like
Ge1_WD40
PROPPIN
Cytochrom_D1
Nbas_N
WDR93
Motif
Other DBs
NCBI-GeneID:
104769963
NCBI-ProteinID:
XP_010492600
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Position
20:complement(7938965..7943869)
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AA seq
875 aa
AA seq
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MAPHSLKKNYKCSRSLKQFYAGGPFIVSSDGSFIVCACGDAINIVDSSDSSVKSTIEGDS
DTLTALALSPDDKFLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGVLATA
GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDANKNILISGSDDSTVRVWDLMAKNT
EKKCLAILDKHFSAVTSIALSEDGLTLFSAGRDKVVNVWDLHDYSCKTTVATFEVLEAVT
TVSSGTPFASFVTSLDQKSKKKDSSSSSLATYFITVGERGVVRLWKSEGSVCLYEQKSSD
ITVSSDDEESKRGFTAAAMLPSDRGLLCVTADQQFFFYSVVENTEESELVLSKRLVGYNE
EIAEMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLV
VTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGI
SEDSEEPVNLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLRG
HKRRIFSVEFSTVDQCVITASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFV
SCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASD
KEDEFRKEEEAILRGQELENAVLDAEYTKAIRLAFELRRPHKVFELFAGLCRKRESDEQI
VKALQGLEKEEFRLLFEYVREWNTKPKLCHVAQFVLYQTFNILPPTEIVQIKGIGELLEG
LIPYSQRHYNRIDRFVRSSFLLDYTLGEMSVIDPETESEYPKEKKKEKEVSAAMERDTEE
LNQETPSRKRKSQKSKDRSSKKRLIAEAQGSVIAV
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcattcgctaaagaagaactacaagtgctctcgatctctaaagcagttctac
gctggtggtcctttcattgtttcatctgatggttctttcatcgtctgcgcctgtggtgac
gccattaacatcgttgattcttcggattcgtctgtgaaatccacgattgaaggagactcg
gatacgctcactgctttggctcttagtcctgacgataagttccttttctctgctggacat
agtagacaaatccgagtttgggatttggaaaccttgaaatgtattcgctcttggaaggga
cacgagggacctgtgatgggtatggcttgccacgcatctggaggggtgttagctactgcc
ggagctgataggaaagtgcttgtttgggatgttgatggtggtttctgcactcattatttc
aaaggacataaaggagttgtgtcaagtatcttgttccatcctgacgcaaacaaaaatatc
cttatatccggaagtgatgattcaacagttcgtgtctgggatctcatggctaagaatact
gagaagaaatgtcttgccattttggataagcacttttcggctgtgacttcaattgctctg
tcagaggatggattgactttattcagtgctggaagagataaagttgtaaacgtgtgggac
cttcatgattatagctgcaagactacagttgcaacgtttgaggttctagaagctgtgaca
acagtttcttctgggacgcctttcgcttcatttgttacttctttggatcagaagagtaaa
aagaaggattcttcttcttcttctctagcaacatattttattactgttggtgaacgtggt
gttgtgcgactctggaagtctgaaggttcagtttgcctctacgagcaaaagtcgtcggat
attactgtcagctcggatgacgaggaatctaaaaggggattcactgcagctgctatgctg
ccttctgatcgcggactgctttgtgtgactgctgatcagcagttctttttctactccgtt
gtggaaaatacagaagaatcagagttagtgctaagcaagaggcttgttggatataatgaa
gaaatagctgaaatgaagtttctaggtgacgaagaacagtttctcgcagtagctacaaat
cttgaggaggttcgtgtttatgatgttgcaacaatgtcatgttcctacgttttagctggc
cataaggaagttgttctgtcccttgacacttgtgtatctagttctgggaatgttctagtc
gtaactggaagtaaagacaaaactgtaaggctatggaatgcaacaagcaaatcttgcatt
ggagttggtacgggtcataatggtgatatcttagcagttgcttttgcgaagaagtccttt
agtttctttgtcagtggcagtggtgatcgcacactgaaggtttggagccttgatggtatc
tcagaagactcagaggagccagttaatctgaaaactagaagtgttgtcgctgcccatgat
aaagacatcaattccgtggctgttgctcgtaacgatagcttggtttgcactggttctgag
gatcgtacggctagcatatggagactaccagacttggtgcatgttgttacacttagagga
cataagaggcggattttttctgttgagttctcaactgttgatcagtgcgtaatcacagcg
tcaggtgataagacagtaaaaatatgggctatatctgatggttcatgcctcaaaacattt
gaaggtcatacttcaagtgtacttagggcctcattcatcactgatggaacccagtttgtc
tcatgtggtgccgatggtttattgaaactttggaatgtgaacactagcgaatgcattgcc
acatatgaccagcacgaggacaaggtatgggctttagctgtcggaaagaagacagaaatg
attgcaactggcggaggtgatgcagttattaacttatggcatgattcaacagcttctgat
aaagaagacgaattccgaaaagaggaagaagcaatcttgagaggtcaagagctggaaaac
gcagtcctagatgctgaatacactaaagctataagattagcatttgagcttcgtaggcct
cacaaagttttcgaactttttgctggtctctgcaggaaaagagaatcggacgaacagatt
gtgaaggcgcttcaaggacttgaaaaagaagagtttcgtttgctttttgaatatgttcga
gaatggaacacaaaaccaaagctatgccacgttgctcagtttgttctttaccaaaccttc
aacatacttcctcccactgaaattgttcagataaaaggaattggagaactcctggaaggt
ttaatcccatattcccagaggcattataatagaatcgacagattcgtaagaagcagcttc
ttgttagactacacacttggagagatgtctgtaattgatccagagactgagagtgagtat
cctaaggaaaagaagaaagaaaaagaggtcagtgctgcaatggaacgagacacagaagag
ctaaaccaggagactccttcgaggaaacgaaagtctcagaaatccaaagacagatctagt
aagaagagactaattgccgaagctcagggaagcgtaatcgcagtttga
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