Camelina sativa (false flax): 104776845
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Entry
104776845 CDS
T05044
Name
(RefSeq) ABC transporter B family member 13-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104776845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csat02000
]
104776845
04147 Exosome [BR:
csat04147
]
104776845
04090 CD molecules [BR:
csat04090
]
104776845
Enzymes [BR:
csat01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
104776845
Transporters [BR:
csat02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
104776845
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104776845
CD molecules [BR:
csat04090
]
Proteins
104776845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_21
nSTAND1
AAA_7
AAA_30
AAA_23
AAA_15
DEAD
DUF87
Mg_chelatase
APS_kinase
Motif
Other DBs
NCBI-GeneID:
104776845
NCBI-ProteinID:
XP_010499285
LinkDB
All DBs
Position
3:complement(12892917..12897748)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDNIEPSSSGNIQAETEAKAEKKKMKKETVSLMGLFSASDKLDYFLMLLGGLGACVHGAT
LPLFFVFFGKMLDSLGNLSTDSKAISSHVSKNALYLVYLGLVNLVSAWIGVSCWMQTGER
QTARLRINYLKSVLAKDITFFDTEARDSNLIYHISSDAILVQDAIGDKTDHVLRYLSQFI
AGFVIGFLSVWQLTLLTLAVVPLIAISGGGYAIIMSTLSEKSEAAYADAGKVAEEVMSQV
RTVYAFVGEEKAVKSYSTSLKKALKLGKKSGLAKGLGVGLTYSLLFCAWALLLWYASILV
RHGKTNGAKAFTTILNVIFSGFALGQAAPSLSAISKGRVAAANIFKMIGKNNLESYKRLD
NGEILENVAGRIEFHQVSFAYPSRPNMVFENLSFTLRSGKTFAFVGPSGSGKSTIISMVQ
RFYEPNSGEILLDGNDIKSLKLKWLREQMGLVSQEPALFATTIASNILLGKENASMVQII
EAAKAANADSFIKSLPNGYSTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSAL
DAESEKIVQQALDTVMEKSTTIVVAHRLSTIRNVDKIVVLRNGQVMETGSHSELISRGGD
YAALVNCQETEPQENPRSIMSEASRSQAGSSSSRRVSSSRRTSSFRGDQEKTENDSNAKD
LSSSSMIWELIKLNAPEWPYALLGSVGAVLAGAQTPLFSMGIAYVLTAFYSPHPNVIKRD
IEKVAIIFVVAGIVTAPIYLLQHYFYTLMGERLTARVRLSLFSAILSNEIGWFDLDENNT
GSLTSILAADATLVRSALADRLSTIVQNLSLTVTALALAFYYSWRVAAVVTACFPLLIAA
SLTEQLFLKGFGGDYTRTYSKSTSVAREAIANIRTVAAFGIEKQISEQFTSELSKPTKNA
FVRGHISGFGYGLSQFLAFCSYALGLWYVSVLIKHKETNFGDSIKSFMVLIVTAFSVSET
LALTPDIVKGTQALGSVFRVLHRETKITPNKLNSKLITQINGDIEFRSVRFAYPTRPEIT
IFQNLNLRVSAGKSLAVVGPSGSGKSTVIGLIIRFYDPNNGNLCIDGQDIKTLNLRSLRK
KIALVQQEPALFSTTIYENIKYGKENASEAEIIEAAKAANAHEFITRMQEGYKTHVGDKG
AQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSSEKLVQDALDMLMKGRTTVLVAHR
LSTIRKADTIAVLNRGRVVEKGSHSELVSIPNGFYKQLTSLQELV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggataacatagaaccatcttctagtggaaacatccaagccgagacggaagcaaaggcg
gagaagaaaaagatgaagaaggaaacagtatcattgatgggtttgttcagcgcatcagat
aaacttgattactttctgatgttgcttggtggtttaggcgcctgtgttcatggcgctacg
cttccgctcttcttcgtcttcttcgggaaaatgctagattctcttggaaatctttctaca
gattctaaagccatatcttctcatgtttcaaagaatgctctgtacttggtctacttagga
ttggtaaatctggtatcagcttggataggagtttcttgttggatgcaaacaggggaaaga
caaacagcgcgattgcgtataaattatctcaaatcagtattagcgaaagacattactttc
ttcgatacagaagctagagattcaaatctcatttaccacatctcaagtgacgccatcttg
gttcaagatgctattggtgataagacagaccatgttttgcggtatttatctcagttcatc
gcgggatttgtcattggatttttgtcggtatggcaactaacgctactcacgttagcagtg
gttccattgatagcaatttcaggaggaggatatgctataattatgtccacactatcagag
aagagtgaagctgcttatgctgatgcaggaaaagtcgcagaagaggtcatgtcacaggtg
agaacagtgtatgcatttgtaggagaagagaaagctgtaaaatcttactcaacctctcta
aagaaagctctgaaactcggtaaaaagagcggtcttgctaaaggcttaggagttggatta
acatatagcctcttgttctgtgcttgggctttacttttgtggtatgcaagtattcttgta
cgtcacggcaaaaccaacggtgcaaaagcgttcacaacgatcctcaatgtcattttcagc
ggatttgccttaggtcaagctgcgcctagcttatccgcgatttccaaaggcagagttgct
gctgcaaatatattcaaaatgatagggaaaaacaatcttgaaagttataagagattagac
aatggagaaatattggaaaacgtagctgggaggattgagtttcatcaggtgtctttcgca
tatccttctagaccaaacatggtttttgaaaatcttagtttcacattacgttcaggcaag
acttttgcatttgttggtccaagtggttcagggaaaagcacaatcatatcaatggtgcaa
cgtttctatgaacctaactcaggagagattctcttggatggaaatgacatcaaaagcctg
aagcttaaatggttgagagaacaaatgggattagtgagtcaagaaccagcattattcgcc
acaaccatagcttccaacattcttcttggtaaagagaatgcaagtatggttcagatcata
gaagctgctaaagcagccaatgcagattctttcattaaatcattaccaaatggttacagt
actcaggttggagaaggaggaactcagctctccggaggacaaaaacagagaattgcaatt
gctcgagcggttctaagaaatccaaagatattacttttagatgaagcaacaagtgctctt
gatgctgaatcagagaagattgttcagcaagcacttgacactgtcatggaaaaaagcaca
acaattgttgttgcacatagattatccaccattcgaaatgttgacaagattgttgtattg
agaaatggtcaggttatggaaaccggtagccactcagagcttatatcaagaggaggagat
tacgcggctcttgtgaattgccaagagacagaacctcaagaaaacccgagatcaattatg
tctgaagcttctagatcacaagctggatcttctagttcaagaagagtttctagctcaagg
aggacttcaagcttcaggggagaccaagagaagaccgaaaatgattcaaatgccaaagat
ttaagctcatcttcgatgatatgggaactgataaagctgaatgctccagaatggccttat
gcattacttggctcagttggtgcagttcttgctggagcacaaactccactcttctctatg
gggattgcttatgtgctaactgcattttattcgcctcatcctaacgtgataaagcgtgac
atagaaaaggtagctattatctttgttgtagctggaatagtaacagctcctatatatctc
ctccaacattacttctacacacttatgggagagcgtcttacggcaagggttcgcttatcc
ttgttctcagcgattctttcaaatgagattgggtggtttgatttggatgagaacaatact
ggctcactcacttcaatcttagctgccgatgcaactttggtgaggagtgctctagcagat
cgcctctcgacaatagtccaaaatctgtctcttacagtcacagcattagcacttgcattt
tactacagttggcgtgttgcagctgttgtaacagcttgttttcctcttctcattgccgct
tcacttacagagcaactatttctgaaaggctttggaggagactacacaaggacttattct
aaatcaacttcagtggcccgtgaagcgattgcaaatataagaactgtcgctgcgtttgga
attgaaaagcaaatctcagaacagtttactagtgagctaagtaagcccaccaagaatgcc
tttgtgagaggtcatatctctggatttggatatggtttgtctcagttcctcgcgttttgt
tcctacgctcttggtctatggtacgtatcagttttgattaagcacaaggagacgaatttt
ggggatagtatcaaatctttcatggtgttgatcgtcacggctttctccgtttcggaaacg
cttgctttgactccagatatcgtgaaaggcacgcaagcactaggatcggtttttagggtt
ttacatagagagactaagataactccaaacaagcttaactcaaaattgatcactcagata
aatggagatatagagtttagaagcgtaagatttgcgtatcccacgagacctgaaatcact
atttttcaaaatctaaacctccgagtttcagccggaaaaagtcttgcggtcgtagggcct
agtggttcgggaaagagcacagtgattggactgatcataagattctacgatccgaacaac
ggaaatctctgcattgatgggcaagatataaaaaccctaaacctacgtagcttgcgcaaa
aagatagcgttagtacagcaagaaccagctctgttttcaacaacaatatacgagaacatc
aagtacggaaaggagaacgcctcagaggcagagattatcgaagccgcaaaagccgcgaac
gcacatgagtttataaccaggatgcaagaagggtacaagacgcatgtgggtgataaggga
gcgcagttatctggtggtcaaaaacagagagtggctatcgcgagggcggttctaaaggat
ccttcagtacttctgcttgatgaggcaacgagtgctttggatacgagctcggagaaactg
gtccaagatgcgctagacatgctgatgaaaggacgaaccacagtactagtggctcatagg
ctctcgaccataaggaaagcagacacaatcgctgtgttgaatagaggaagagttgtggag
aagggaagccatagtgagcttgtttccatacctaatgggttttataagcaattaacgagt
cttcaagaactggtgtga
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