Camelina sativa (false flax): 104781409
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Entry
104781409 CDS
T05044
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104781409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csat02000
]
104781409
04147 Exosome [BR:
csat04147
]
104781409
04090 CD molecules [BR:
csat04090
]
104781409
Enzymes [BR:
csat01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
104781409
Transporters [BR:
csat02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
104781409
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104781409
CD molecules [BR:
csat04090
]
Proteins
104781409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_21
AAA_16
AAA_15
AAA_30
HTH_psq
Motif
Other DBs
NCBI-GeneID:
104781409
NCBI-ProteinID:
XP_010504382
LinkDB
All DBs
Position
4:complement(20258696..20265245)
Genome browser
AA seq
1411 aa
AA seq
DB search
MMISRGLFGWSPPHMQPLTPVSEVSEPPESPSPYLDPGAESGGGGTGTAAAQAQADADEE
IDELDEVEPPPAAVPFSQLFACADRFDWVLMIVGSVAAAAHGTALIVYLHYFAKIVEVLA
FSNDLGHQRSRDQFDRLVELSLTIVYIAGGVFISGWIEVSCWILTGERQTAVIRSKYVQV
LLNQDMSFFYTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLIIGFVNCWE
IALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAISYIRTLYAFTNETLA
KYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWIGRFFVNNGRANGGEIIA
ALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMITRSSSVANQEGDVLASVQGNIEFR
NVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDG
ENIKNLKLEWLRNQIGLVTQEPALLSLSIRENIAYGRDATHDQIEEAAKIAHAHTFISSL
EKGYETQVGRAGLSMTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERIVQEALDLL
MLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELINLGGLYAELLKCEEATKLPR
RMPVRNYKESAVFQVERDSSADCGIQEPSSPKMIKSPSLQRGNGVFRPQDLCFNTEESPN
DHSPAPEKVGENGLPLDDADKEPTIKRQDSFEMRLPELPKIDVQCPRQKSNGSDPESPVS
PLLTSDPKNERSHSQTFSRPLSFSDDTTANGKPAKDAQHKKSPSFWRLAQLSFPEWLYAV
LGSLGAAIFGSFNPLLAYVIALVVTEYYKSKGGHLREEVDKWCLIIACMGIVTVVANFLQ
HFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSPDTLSMRLANDATFVRAAFSNRL
SIFIQDSFAVIVALLIGLLLGWRLALVALATLPILTLSAIAQKLWLGGFSKGIQEMHRKA
SLVLEDAVRNIYTVVAFCAGNKVMELYRMQLQRILRQSFLHGMVIGFAFGFSQFLLFACN
ALLLWCTALSVDRGYMKLSTAITEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIID
RVPTIEPDDNSALKPPNVYGSIELRNIDFCYPTRPEVLVLSNFSLKISGGQTVAVVGVSG
SGKSTIISLVERYYDPVAGQVLLDGRDLKLYNLRWLRSHMGLVQQEPIIFSTTIRENIIY
ARHNASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTPGQKQRIAIARVVLKNAP
IILIDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEE
GTHDSLTAKNGLYVRLMQPHFGKGLRQHRLI
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctccagaggtttattcggatggtctccacctcatatgcaaccgttaactcca
gtctctgaagtctccgagcctcccgagtctccttctccttatctcgaccctggtgctgag
tctggtggtggtggcacgggtacggcggcggcgcaagcgcaagcggacgctgatgaagag
attgatgagctagacgaggttgagccacctcctgctgctgttcctttctctcagctcttc
gcttgcgctgaccgtttcgattgggtgcttatgattgttggctccgtcgctgctgctgct
catggtactgcgcttattgtttacttgcattacttcgccaagattgttgaggttcttgct
ttctctaatgatttgggtcaccagagatctcgggatcagtttgaccgcctcgtcgagctt
tcattgacaatcgtctacatcgccgggggtgttttcatttctggttggattgaggtttct
tgctggatactgactggagagaggcagaccgctgtgatcaggtccaagtatgtccaagta
ctattgaatcaggatatgagtttcttttatacatatggtaataatggggatattgtgagc
caagtgctgagcgatgtcttactcattcagtcagctttaagcgaaaaagttggaaattat
attcataacatggctacgtttatcagtggacttattattggatttgtcaactgctgggaa
attgcattgattacactagccaccggtcctttcattgttgctgcaggaggcatatcaaat
atatttctccacagacttgctgagaacatacaagatgcatatgctgaagcagccggcatt
gctgaacaggcaatctcttacattaggactttatatgcctttacaaatgaaactctagca
aaatattcatatgcaacctcccttcaagcaaccctgagatatggcatattaattagtctt
gtgcaaggccttggacttggatttacttatgggcttgctatatgctcgtgtgctctgcaa
ctttggattggacgattcttcgttaacaatggaagggcaaatggtggagaaatcatagca
gctctttttgctgttattttaagtggcctgggtttaaaccaagctgctacgaacttctat
tcttttgatcaaggaaggattgctgcgtatagactttttgagatgataactcgttcttct
tctgtggctaatcaagaaggagatgtgctggcttctgttcaaggaaatattgagttccgg
aatgtgtatttcagttatctgtcacggcctgaaattccaatcttgagtggattttacctg
acggttcctgctaaaaaagcagttgcacttgttggtagaaatggttctggaaaaagcagc
atcattccgttaatggaacgattttatgatccaacattaggagaagttctccttgatgga
gaaaatattaaaaatctaaaactggagtggctgagaaaccaaataggcctggttacccag
gagcctgctctgctaagcttgagcataagagagaatattgcatatggtcgtgatgctact
catgatcagatagaggaggcagccaaaattgcgcatgcacacacatttatcagctcactt
gaaaaaggatatgaaactcaggtcgggagagccggtttatcaatgacagaggagcagaaa
ataaaactttcgattgctagagctgtgcttttgaacccaacaattcttctgctagatgaa
gtaactggaggactagacttcgaagctgaaagaattgttcaggaggctctcgatcttctg
atgttgggacggtcaacgataataatagcccgacgattaagtttgattagaaatgctgac
tatattgccgtgatggaggaaggtcagctcgttgaaatgggtacacacgatgaattgata
aatcttggtgggctgtatgctgagcttctgaagtgtgaagaagcaacaaagcttccaaga
aggatgccagttaggaactacaaggagtctgcggtgtttcaggttgagagagactcgtca
gctgactgtggcatccaagaaccatcatcacccaaaatgatcaagtctccatctcttcag
agaggtaatggtgtgttccgtccccaggacctgtgttttaatactgaagaatcacctaat
gatcatagccctgcacctgagaaagtgggggaaaatggcttgcctctggacgatgctgat
aaagagccaactatcaaaaggcaagatagtttcgagatgaggttaccagaacttcctaaa
attgatgttcagtgtccccgtcaaaaatcaaacggttcagatcctgagtcccctgtttca
ccccttttaacatccgatcctaaaaacgagcgttctcattctcagacgtttagtcgtcct
cttagtttttctgatgacactacagcaaatggtaagccggctaaggatgctcaacacaag
aagtcaccttcattttggaggttggcacagcttagtttcccagagtggctttatgctgta
ttagggagtcttggtgctgccatctttggctctttcaatcctcttctggcttatgtcatt
gcgttggtagtgacagaatattataaaagcaaaggaggccacctacgcgaggaggttgac
aaatggtgtttaatcattgcatgcatggggattgtgacagttgttgccaatttcttgcag
cacttctattttggcataatgggggagaaaatgacggagagagttcggaggatgatgttc
tcagcaatgctgcgtaacgaagttggatggttcgatgatgaagagaacagtccagatacc
ttatcaatgcgtttagcaaatgatgctacttttgtccgagctgccttcagcaacaggctt
tcaatatttattcaagatagttttgccgttattgttgctcttcttattgggttgctgctt
ggttggcgtttggcccttgttgcattggcaactttgccaatactcacactttctgccatt
gctcagaaactgtggcttggcggattctcaaagggcatacaggagatgcatagaaaggca
tctttagtcctcgaggatgctgttagaaacatctacactgttgttgctttctgtgctggt
aacaaagtgatggaactgtacaggatgcagctccagcggatactcagacagagctttctc
catgggatggttattggttttgcgtttggtttctcgcagtttcttcttttcgcctgcaat
gcgctcctcctatggtgcactgcgttatctgttgaccgcggatatatgaaattatccaca
gctataacagagtacatggttttctcatttgctacatttgcccttgtcgagccatttgga
ttagcaccgtacatcctcaagcgacgtaagtctctcatttcagtttttgagatcatagat
cgagtccctacaattgaaccagatgataactctgctctcaaaccgcctaatgtctacgga
agcattgaactgaggaacatcgacttctgctacccaactcgacccgaggtacttgtgctg
agcaacttcagtctgaaaatcagtggcggacagaccgtagctgtggttggcgtttcgggt
tctggaaaaagcactataatctcactagtagagagatactacgacccagttgctggtcaa
gtcctactagatgggagagacttgaagttgtataatttgagatggttgagaagccacatg
ggtttggttcagcaagaacccataatcttttccacaacaatcagagagaatatcatatat
gcaagacataatgcgagtgaagctgagatgaaggaagcagcaagaattgcaaatgctcac
catttcatcagcagcttacctcacggttacgacacacatatcgggatgagaggcgtggaa
cttaccccgggacagaaacagagaatagcgatagcgcgggtagtgctgaagaatgctccc
atcatcttaatagatgaagcaagctcgtctatcgaatctgaatcgagccgggttgtgcag
gaggctcttgacacattgataatggggaacaaaacaacgattctaatagcacatagagcg
gctatgatgagacatgtggataacattgtggttctcaatggagggaggatagtagaggaa
ggtacacatgattctttaacagcaaagaatggattgtatgtccgtttgatgcaaccacat
ttcggtaaaggtttacgccaacatcgactaatatag
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