Cannabis sativa (hemp): 115700127
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Entry
115700127 CDS
T08987
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115700127
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115700127
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
ADNP_N
NosD
Motif
Other DBs
NCBI-GeneID:
115700127
NCBI-ProteinID:
XP_030483549
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Position
8:complement(42414918..42416315)
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AA seq
393 aa
AA seq
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MSPILCGIVNLFIILGSHATAQVFDITKKGATTSSSDISKSLLEAWNGACASSTPSKVLV
PKGTFQLRVAMLQGPCKAPINFDLEGTLQAPGLGPSYSSGNVWIVFSYVDRLTISGTGTF
DGRGQTAWGKKCDWNEFCGNLPINLRFNFVTNSVIQDVTSKDSKQFHVNLIGCKNMTFQY
FHVLAPEKSLNTDGIHIGKSTDIKIVNTTIETGDDCISIGDGSKQITITNVTCGPGHGIS
IGSLGKYKDEEPVKGVYVKSCTLKNTQNGVRIKTWPDSKPGAASDMHFEDITMENVGNPV
LIDQEYCPFNGCKNKLPSNVKISNVSFKRIRGTSSTPLAIKLVCSGGMPCQNVVVSDINL
KYNGSQGSMSSECKNVKPVVSGTLNPPVCSISH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaattttatgtggaatagttaatttattcataattttgggatctcatgccacg
gcccaggtctttgatatcacaaaaaaaggtgcaacaaccagtagttcagatatttccaag
agtttgttagaggcttggaatggggcctgtgcatcatcaaccccaagtaaagtgttggtc
cctaaagggacattccaattaagagtagcaatgctacaaggaccttgcaaggctcctatt
aatttcgacttggaaggcacattgcaagcacctggactgggccctagctatagctccggc
aatgtttggatcgtattttcttatgtcgaccgcctcactatttctggtacaggtactttc
gacggtcgaggtcaaactgcttggggtaaaaaatgtgattggaatgagttttgcggtaac
cttccaattaatttacggttcaactttgtgaccaactccgtaatccaagatgttacaagc
aaagacagcaaacagtttcacgttaaccttattggctgcaagaacatgaccttccagtac
ttccacgttctcgcgcccgaaaagagcctcaacaccgacggaatccacattggaaaatcg
acagacatcaagattgtcaacaccacaatcgaaactggtgatgactgcatttctattggg
gatggaagcaagcaaattacaatcactaatgtcacttgtggaccgggccacggtatcagc
atcggtagtctaggaaagtacaaagatgaggagcccgtcaagggtgtttacgtgaagagt
tgtactttaaagaacacacagaatggagttcggataaagacttggcctgactcaaaacct
ggagcagcttcagacatgcatttcgaggacataacgatggagaacgtaggcaacccggtg
ttaattgaccaagagtattgcccctttaacggctgcaagaacaagcttccgtctaatgtt
aagattagtaatgtaagctttaagaggataaggggaacttcttctacaccattagctata
aaactggtgtgcagtggtgggatgccctgccaaaacgtcgtcgtttcagacattaatttg
aagtacaacggtagtcaagggtcaatgtcttccgagtgcaaaaatgtgaagcctgtcgtg
agcggaacactgaacccaccagtttgctctattagccattag
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