Cannabis sativa (hemp): 115700507
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Entry
115700507 CDS
T08987
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115700507
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csav01002
]
115700507
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115700507
Enzymes [BR:
csav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115700507
Peptidases and inhibitors [BR:
csav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115700507
Ubiquitin system [BR:
csav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115700507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
115700507
NCBI-ProteinID:
XP_030483912
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All DBs
Position
8:43785122..43795346
Genome browser
AA seq
1122 aa
AA seq
DB search
MTMMTPPPLDQQEDEEMLVPHSDLVEGPQPMEAAQVEPANTVENQTVENQPVEDPPSIKF
TWTIENFTRLNVKKHYSDVFVVGGYKWRILIFPKGNNVDYLSMYLDVADSSTLPYGWSRY
AQFSLAVVNQMHNKYSIRKDTQHQFNTRESDWGFTSFMPLSDLYDPSRGYLMNDTCLVEA
EVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDM
PSGSIPLALQSLFYKLQYNDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKM
KGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVE
RLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQL
DLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLTDQWYKFDDERVT
KEDMKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD
IAEHLRVRLKKEQEEKEDKKRYKAQAHLFTIIKVARDEDLSEQIGKDIYFDLVDHDKVRS
FRIQKQTPFNQFKEEVAKEFGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEETQSVGQLRE
VSNKTHNAELKLFLEVELGPDLRPIPPPDKTKEDILLFFKLYDPEKKELRYVGRLFVKSS
GKPMEILGKLNQMAGFASDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQK
SPLPETEVESKYPDVPSFLEYVHNRQIVHFRALERPKEDDFCLELSKIHSYDDVVERVAR
QIGLDDPSKIRLTAHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQVTSDILYYEVLDIPLP
ELQGLKNLKVAFHHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSRPDAELRLLEVFY
HKIYKIFPHTEKIENINDQYWTLRAEEIPEEEKNLGAHDRLIHVYHFTKDTAQNQMQVQN
FGEPFFLVIREGETLAEVKVRIQKKLQVPDDEFSKWKFAFLSLGRPEYLQDSDVVSSRFQ
RRDVYGAWEQYLGLEHSDNAPKRAYAVNQNRHAYEKPVKIYN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactcctccgccgttggatcagcaagaagacgaggagatgcttgtgccg
cattcggatttggtcgagggacctcagccaatggaagcagctcaggtggagcccgctaat
acggtggagaatcaaactgttgagaatcaaccagtagaggatcctccatcaattaaattt
acttggacaattgaaaactttacaaggttgaatgtaaaaaagcactattctgacgttttc
gtcgtggggggttataaatggcgaatactaatttttcccaaggggaataatgtagactat
ctatcaatgtatttggatgtggccgattcttcaacattgccttatggatggagtagatat
gctcagttcagcctggccgtggttaaccagatgcataacaagtactcaataagaaaggac
acgcagcaccagtttaacacaagggaaagtgactggggcttcacatcgttcatgcctctg
agtgatctttatgaccctagtagaggatatcttatgaatgacacatgtttagttgaagcc
gaggtagctgtccgcaaggttcttgattactggtcttatgattctaaaaaggaaactggt
tacgttgggctcaagaatcagggagcaacttgttacatgaattctctgctccagacgttg
taccatattccttatttcagaaaggctgtgtaccatatgccaactactgagaatgatatg
ccatcgggaagcatcccacttgcgctacagagtttattctataagcttcaatacaatgac
agcagtgttgccacaaaagaattaaccaagtcttttggatgggatacatatgattctttt
atgcaacatgatgtgcaagaactcaacagggtactttgtgaaaagcttgaagacaaaatg
aagggaactgttgtggagggtacaatacaacaattatttgagggtcatcacatgaattac
atcgagtgcataaatgtagactacaaatctacaaggaaggaatcattttatgatcttcag
cttgatgtgaaaggatgtcgggatgtttatgcctcttttgacaaatatgtggaagttgaa
cgtcttgagggcgataataaataccatgctgaagaacatggtttgcaggatgctaagaag
ggtgtcttatttattgacttcccacctgtccttcaacttcaactaaagcggtttgaatat
gattttatgcgggacactatggtcaagatcaatgaccgctatgagtttcctcttcaactt
gatcttgacagggaaaatggaaaatatctatcacctgatgctgatagaagtgtccgcaac
ctttatacacttcatagtgttttggttcatagcggtggggtgcatggtggacactactat
gcttttattcggccaaccctcacagatcagtggtacaaatttgatgatgaacgcgtgaca
aaagaagatatgaaaagggctctagaagagcagtatggtggcgaggaagagttgccacaa
accaatcctggttttaataatactcccttcaagtttacaaaatactctaatgcatacatg
cttgtgtatataagggaaagtgacaaggacaaaataatttgtaatgttgatgagaaggac
attgctgaacatttaagggtgagattgaagaaagaacaagaagagaaggaggataagaaa
agatataaagcacaagcccacctttttactataataaaggtcgcacgagatgaggacctt
tctgaacagattggaaaagatatatattttgaccttgtagatcatgataaagttcgtagt
ttccgtattcagaaacaaacaccttttaaccaattcaaggaagaggttgcaaaagagttt
ggaatacctgtgcaatttcaacgattctggatttgggcaaaacggcaaaatcacacgtac
cgccccaatagacctttgacacctcaggaggaaacacaatcagttggacagttgagagag
gtctcaaataagacacataatgcagagctcaaattgtttttggaagttgagctcggaccg
gatttacgtcctattcctccacctgacaaaactaaggaggatatactactctttttcaag
ctttatgatcctgagaaaaaggagctacgatatgttgggaggctttttgtgaaaagctct
ggtaagccaatggaaattttaggaaaacttaatcaaatggctggatttgcttctgatgaa
gaaatagagctttatgaggagataaagtttgaaccttgtgtcatgtgtgaacaccttgat
aagaggacctcttttcggttgagtcagatcgaagatggggacattatttgctttcagaaa
tctcctctacctgaaactgaagtagaaagcaaatacccagatgtgccttcatttttggaa
tatgtacacaatcgacagattgttcactttcgagcattggagagaccaaaggaggatgat
ttctgtttagaactgtcaaagatacacagttatgatgatgtggtggagagagtggctcgc
caaataggtttggatgatccatctaaaatcaggctaacagctcataactgttattctcag
caacctaagccccagcctataaaatacagaggagtagaacatttgtcagacatgctagtc
cattacaatcaagtaacctcagatattttgtactatgaagttttggacatccccctgcca
gaactacaaggtttgaaaaatctgaaagttgcttttcatcacgcaacaaaagatgaggtt
gttattcacaacatcagattacccaaacagagcactgttggagatgtgatcaacgaactt
aaaacgaaggtagagttgtctcgtccagatgcagaactcagactgcttgaggttttctac
cacaagatatacaagatatttccacacactgaaaagatagagaatataaatgatcaatat
tggaccttgcgagcagaggagattccggaagaagagaaaaacctgggtgcccatgatcgc
ttgattcatgtttaccacttcacaaaggacactgctcaaaaccagatgcaagtccaaaat
tttggtgaacccttcttcttggtcattcgtgaaggtgagactttagctgaagtcaaggtg
cgtattcaaaagaagttgcaggttccagatgatgagttttctaagtggaagtttgctttc
ttatcccttggccgtccagagtacctgcaggattctgatgtagtttcaagtcgttttcag
agaagagatgtatacggtgcttgggaacagtaccttgggttggagcactctgataatgct
cctaagagggcttatgcagtaaatcagaaccgacatgcatacgagaagccagttaaaatt
tacaactaa
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