Cannabis sativa (hemp): 115709438
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Entry
115709438 CDS
T08987
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115709438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csav02000
]
115709438
04147 Exosome [BR:
csav04147
]
115709438
04090 CD molecules [BR:
csav04090
]
115709438
Enzymes [BR:
csav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
115709438
Transporters [BR:
csav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
115709438
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115709438
CD molecules [BR:
csav04090
]
Proteins
115709438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
nSTAND1
AAA_5
SbcC_Walker_B
DUF815
AAA_30
APS_kinase
AAA_15
DUF87
Rad17
Motif
Other DBs
NCBI-GeneID:
115709438
NCBI-ProteinID:
XP_030493406
LinkDB
All DBs
Position
3:56193781..56200359
Genome browser
AA seq
1394 aa
AA seq
DB search
MSQDSQEIKTIEQWRWSEMQGLELVSASPSPTFEPFKGNPSTQTAMALAMASSQPTTTKE
PVRLDDEEEGKREPQLGLDTASKTEEEAMENSNNNNDEQPKKDSNGGGGSSSSGSGGSSG
EKPEPYPAAGFGELFRFADSLDYVLMTIGSLGAIVHGCSLPLFLRFFADLVNSFGSNAND
TDKMMQEVLKYALYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIKYLEAALNQDIQYF
DTEVRTSDVVFAINTDAVMVQDAISEKLGNFVHYMATFVSGFVVGFTAVWQLALVTLAVV
PLIAVIGGIHTTTLAKLSGKSQESMSEAGNVVEQTIVQIRVVMAYVGESRALQAYSNALR
IAQKLGYKSGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGG
LALGQSAPSMGAFAKAKVAAAKIFRVIDHKPSIDRNSDSGLELESVTGLVELRNVDFSYP
ARPDVRILNNFCLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGHDIKTLK
LRWLRQQIGLVSQEPALFATTIKENILLGRPDADLVEIEEAARVANAHSFIIKLPDGFDT
QVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTT
LVIAHRLSTIRKADLVAVLHQGSVSEIGTHDELIAKGENGMYAKLIKMQEAAHETALNNA
RKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDAPYPNYRLEKLPF
KEQASSFWRLAKMNSPEWVYALVGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHAFMIKQ
IGKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLAAVLKNEMAWFDQEENES
GRVAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAA
TVLQKMFMTGFSGDLEAAHSKATQLAGEAIANVRTVAAFNSEGKIVGLFTTNLEAPLRRC
FWKGQIAGSGFGIAQFALYASYALGLWYASWLVKHEISDFSKTIRVFMVLMVSANGAAET
LTLAPDFIKGGRAMRSVFELLDRKTEIEPDDPDATPAPDRLRGEVELKHVDFSYPSRPDI
PVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLR
KHIAVVPQEPCLFATTIYENIAYGHESATEAEIIEAATMANAHKFVSSLPDGYKTFVGER
GVQLSGGQKQRIAIARALLRKAELMLLDEATSALDAESERSVQEALERACSGRTTIVVAH
RLSTIRNANVIAVIDDGKVAEQGSHSHLLKNYPDGCYARMIQLQRFTHSQVIGMASAGST
SSAKPKEDEEREAK
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctcaggagataaagacgattgagcagtggagatggtccgaaatgcaa
ggtttggagctcgtgtctgcttctcctagtcctacttttgagccatttaaaggcaaccca
tcaacgcaaacggcaatggctttggctatggcttcttctcaacccacaacaactaaagag
ccagtcagacttgatgatgaggaagaaggaaaacgagaaccccaactgggtctcgacaca
gcttccaaaacagaagaagaagcaatggagaatagcaacaacaataacgatgaacagcct
aagaaagactctaatggcggtggcggtagtagtagtagtggtagtggtggcagtagtggg
gagaagcctgagccttatccggcagctgggttcggtgagctttttcgattcgctgatagt
ttggattatgttctgatgacaattgggtcgcttggagctatcgtccatggctgctctttg
cctctctttcttcgattctttgccgatcttgttaattcctttggctccaatgccaatgac
acggacaagatgatgcaagaggttctaaagtatgcattatattttctagtcgttggagct
gcaatatgggcatcttcgtgggctgagatatcttgttggatgtggactggagaaagacaa
tcaaccaggatgagaattaagtaccttgaagctgctttgaaccaagatattcaatacttc
gatactgaagttcgaacatcagacgttgttttcgccataaacactgatgctgttatggtc
caagatgccattagtgaaaagttgggaaattttgttcactatatggccacatttgtatct
ggttttgtggttggtttcactgctgtgtggcaattagctttagtgactcttgcagttgtt
cctctcatagctgttattggaggtatccacactactacattagccaaactctctgggaag
agccaggagtctatgtcagaagctggaaatgttgttgagcagacaattgttcaaattcgg
gtggtgatggcttatgttggagaatcaagagcattacaagcatattccaacgcattgaga
attgctcaaaagctcggttacaagagcgggttggcaaagggaatgggacttggggcaact
tactttgtagtgttttgctgttatgcacttctgctatggtatggtggttatcttgttagg
catcactataccaatggaggactcgccatagccaccatgtttgctgtcatgatcggtgga
ctggccttaggtcagtctgcacctagcatgggtgcatttgcaaaggctaaagttgcagct
gctaaaatttttcgtgtaattgatcacaagccaagcattgaccgcaacagcgactcaggg
ttggaactagagtcagttacaggactagttgaactaagaaatgtggacttctcctaccct
gcaaggcccgatgttcgcattttaaacaacttctgcctaaatgttccagccggaaagact
attgctttagttggaagcagtggctctggcaagagcacagtggtctcccttattgagaga
ttctatgaccctacctcagggcaagttatgcttgatgggcatgacataaagacactaaaa
ctcaggtggctgagacaacaaattggacttgtgagccaagaacctgctctatttgctaca
accattaaagaaaacatactgttgggtaggcctgatgctgatctagttgaaattgaagaa
gctgctagagttgcaaatgctcattcattcattatcaaacttcccgatggctttgatact
caggtaggggaaagaggtttgcagctctctggaggacagaaacagaggatagctatagca
agggccatgctaaaaaacccagcaatcttattgttagatgaggcaacaagtgcattagat
tctgaatcagagaagctggttcaagaggccctagatcggtttatgattgggaggacaact
cttgtcattgctcatcgcctatcaaccattcgcaaggctgaccttgtagctgtactgcac
caggggtctgtttctgaaattggaacccatgatgaactcattgctaaaggagagaatggt
atgtacgcgaagctcatcaaaatgcaggaggcagcacatgaaactgctctcaacaatgcc
agaaagagtagtgcaagaccttctagtgccaggaactcagtaagctcaccaataattgct
cgaaattcctcgtatggtcgctcaccctattcacgccggctgtctgacttctcaacttct
gatttcagtctttcccttgatgccccatatccaaattaccggcttgaaaagcttcctttt
aaggagcaagctagctctttctggcgtcttgcaaaaatgaattctccagaatgggtttat
gctttagtcggttcaattggttctattgtgtgtggatcacttagtgctttctttgcatat
gttctgagtgctgttctcagtgtctactacaatccagaccacgctttcatgattaaacaa
atcggtaagtattgttatctgttgattggactttcttcagctgcacttctcttcaacaca
ctacaacatttcttctgggatattgtgggcgaaaacttgacaaaacgtgtgagggagaaa
atgctggcagcagtgctgaaaaatgaaatggcatggtttgaccaggaggaaaatgaaagt
ggtagagtagctgcaaggctggctcttgatgctaacaatgtcagatcagccattggagac
aggatatcagtaattgtacagaacacggcactcatgttagttgcctgcacagccggattt
gttctgcagtggcgtcttgcccttgtccttgtagccgtcttccctgtcgttgttgctgcc
actgtcttacagaaaatgttcatgactggtttctctggagaccttgaagctgcacattcc
aaggccacccaactagctggggaggccatagccaatgtaagaactgtagctgcctttaat
tcagagggaaaaatagttggtctattcactaccaaccttgaggctccattacgacgctgc
ttttggaagggtcagattgctggaagtggatttgggatagctcagtttgcactttatgcc
tcttatgcacttggtctttggtatgcttcgtggcttgttaaacatgagatctctgatttc
tcgaaaactatcagagttttcatggtccttatggtctctgccaatggagcagctgaaaca
ttgaccttagctcctgacttcatcaaaggtggccgagctatgcgctcagtatttgaactt
cttgaccgtaaaactgaaatagaacctgatgatccagatgccacaccagctcctgatcgg
ctgcgtggtgaagttgaattaaagcatgtagacttctcttacccttctcgccctgatatc
cctgtcttccgtgacttaagtcttcgtgctcgagcaggcaaaactcttgcacttgttggt
cctagtggatgtggaaagagctcggttattgcattggtacaacggttctacgacccaaca
tcaggccgggttatgattgatggcaaagacattagaaaatacaatctcaagtccctcaga
aagcacatagctgtagtgccgcaggagccatgccttttcgctacaactatatatgagaac
atagcttatggtcatgagtcagcaactgaggctgaaatcatagaagctgcaactatggcc
aatgctcacaaatttgtatcttcattgcctgatggatacaaaacatttgttggggaaaga
ggagtccagttatccgggggtcaaaaacaaagaatcgcaatcgctcgagcattattgagg
aaggcagagcttatgctgcttgacgaggcaactagtgcactcgatgctgagtctgaaaga
tctgttcaagaggctttagagcgtgcctgctccggaagaactacaattgttgtagcacac
agactttccactatccgaaatgccaatgttattgcagtaatcgacgatgggaaagtagcg
gagcaaggatcccactcccatttgttaaaaaattaccctgatgggtgttatgcaagaatg
atccagttacaaaggttcacacacagccaggttattggtatggcttcagcaggctcaact
tcttcagcaaaacccaaagaagatgaggaaagagaagccaagtaa
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integrated database retrieval system
