Cannabis sativa (hemp): 115709470
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Entry
115709470 CDS
T08987
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g18900
Organism
csav
Cannabis sativa (hemp)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_3
PPR_1
PPR
PPR_long
ECSIT_N
Motif
Other DBs
NCBI-GeneID:
115709470
NCBI-ProteinID:
XP_030493445
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Position
3:complement(14986449..14990297)
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AA seq
875 aa
AA seq
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MMLRAKHIGNLSNSARSFFLSGSRCNAADGSSCTCSEDEACVSRRQHHRHGGALAQNQPT
LASRTTARVGNFIAGDVVKVVAPQKANIVHSASLKQAKIAPQKLVISDCVSYANVVENVE
KDVENSLPPISDQFVKAGVAAVTFLSDIVNSKFPLSDGIGVLSLPKNCMVDPTRISSIKP
SHVKHIKRENFSSVHPRSSAEAAVPLNSTSNSHGAKSKGGKSYVSKGVNNVPHTKTGNSW
GSQSVPTDARDKKAMPNRTRSFINSFKADFSSNYHQASDAGSEGYVNKGFNRPPRDVKYP
NAYASSRRPSAYTFNPVESVSQILQGIKWGRAAEEKLENLNFVLDAYQANQILKQLQDHT
VALGFFYWLKRKAGFKHDGHTYTTMVGNLGRARQFGTINKLLNEMVREGCQPNVVTYNRL
IHSYGRANYLQDAVNVFNQMQKTGCEPDRVTYCTLIDIHAKAGFLDIALHLYDRMQGAGL
SPDTFTYSVIINCLGKAGHLTAAHNLFSKMVSDGCTPNLVTYNIMLALQAKSRNYEAALE
LYRGMQNAGFEPDKVTYSIVMEVLGHCGFLEEAEDMFNEMRQRNWVPDEPVYGLLVDLWG
KAGNIEKAWAWYGAMLEAGLQPNVPTCNSMLSALLRVHRLSDAYNLLQGMVDLGLNPSLQ
TFTLLLSCCTEARSPHDMGFCSKLMEITGHPAHTFILSMPSAGPDGQNVREHVNKFLDLM
HSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKKKSSSHWLINLHVM
SDGTAVTALSRTLAWFRREMLMSGACPNRIEIVTGWGRRSKVTGTSLVRQSVQELLRMFS
FPFFTENGNTGCFVGCGESLNKWLLHSYVERMHLL
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcgagcgaagcatattggaaatctttctaacagtgcaaggtctttcttctta
agtgggtcacgatgtaatgcagcggatggtagttcttgcacttgctctgaggatgaagct
tgtgtttcacgaaggcagcatcaccggcatggaggtgcacttgctcaaaatcaacccacc
ttggcatccagaacgacagcaagagtaggaaattttattgcaggagatgtagtgaaagtg
gtcgctcctcaaaaagctaatatcgttcactcagcttctttgaagcaagccaagatcgcc
ccccaaaaattggtgatatcagattgtgtaagttatgccaatgttgttgaaaatgttgag
aaggatgttgaaaattctttgcctcctatttcagaccagtttgttaaggctggtgttgca
gctgtaacttttctttctgatattgtgaattctaagtttcctttatctgatggaattgga
gtgcttagcttgcccaaaaactgtatggttgaccccaccaggatttctagtatcaaacca
tcacatgtgaaacacatcaaaagagagaacttttctagtgtccatcctagatcatctgct
gaggcagcagttccattgaattctacgagtaattctcatggggcaaagagtaaaggtggt
aaatcttatgtaagtaagggtgtaaataatgttcctcatacaaagactggaaactcatgg
ggcagtcaaagtgtacctactgatgctcgtgataaaaaagctatgccaaatagaactagg
tcttttataaacagcttcaaagccgatttcagttctaactatcatcaggcttctgatgca
gggtctgaggggtatgttaataaaggctttaacaggcccccaagagatgtgaaataccca
aacgcttatgcttcaagcaggaggccatctgcatatacttttaatcctgttgaaagtgtt
tcccagatactgcaaggaattaagtgggggcgggctgctgaagagaagcttgaaaatctc
aattttgtgttggatgcatatcaggcaaaccaaattctaaagcaacttcaagaccatact
gttgctcttggttttttctattggttaaaacggaaagcgggattcaagcatgatggacac
acttataccacaatggttggcaaccttggtcgtgctaggcaatttggtaccataaacaaa
ttgcttaatgagatggtgagggaaggatgccaaccaaatgttgtaacatataatcgattg
attcacagctatggtcgagcaaactacttacaagatgcagttaatgtgttcaatcaaatg
cagaaaacagggtgtgagcctgaccgggtgacatattgcacgctgattgacattcatgcc
aaggctggttttcttgacattgctctacatctatatgataggatgcaaggggcaggtctt
tctcccgatacattcacttacagtgtcataattaactgtctcgggaaggcgggtcactta
actgcagcccacaatcttttttctaagatggttagtgatggttgcactcccaacttagtc
acctacaatatcatgctagctttgcaagctaaatcaaggaactatgaggctgcattggag
ctttaccgtgggatgcagaatgcaggttttgaaccagataaggtgacttacagtatagta
atggaggtgcttggtcattgtgggtttcttgaggaagctgaagacatgtttaatgagatg
agacagagaaactgggttcctgatgaaccagtttatggtcttttagtagatctgtggggt
aaggctggtaatattgagaaggcttgggcttggtatggagcaatgcttgaggcagggttg
cagccaaatgtacctacttgtaattcaatgctcagtgctttgctcagggtgcatcgacta
tcagatgcttataacctgctgcagggcatggtggatttgggtctcaacccttctttacaa
acttttactttactcctcagttgctgtacagaagcgcggtctcctcatgacatgggattt
tgtagcaagctcatggaaattacaggccatcctgcgcatacatttatactgtcgatgcca
tcagcaggcccagatggtcaaaatgtgcgagaacatgtgaataaattcttggatctgatg
catagtgaggatagagaaggcaagaggggactagttgatgcagtggtagattttcttcac
aagtcagggctcaaagaggaggctggctctgtttgggaggtggctgcacaaaagaatgtt
tacccagacgcagtcaagaagaaaagcagtagtcattggcttatcaatcttcatgttatg
tcggatggtactgctgttactgcgctttctagaacacttgcctggtttcgccgagagatg
ctaatgtcaggagcttgcccaaaccgaattgaaattgtgacgggatggggccgtaggagc
aaggttacaggaacttctctagtgaggcagtcagtgcaggagctattgagaatgtttagt
tttccatttttcaccgaaaatgggaacacgggttgctttgttgggtgtggtgagtctctt
aacaagtggctgctccattcttatgtggaaaggatgcatttgttgtag
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