Cannabis sativa (hemp): 115709787
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Entry
115709787 CDS
T08987
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115709787
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
115709787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
FliJ
AAA_16
ABC_tran
NACHT
AAA_25
AAA_27
HSBP1
Motif
Other DBs
NCBI-GeneID:
115709787
NCBI-ProteinID:
XP_030493858
LinkDB
All DBs
Position
3:complement(987751..997753)
Genome browser
AA seq
1048 aa
AA seq
DB search
MKEPPSKRPKIVRGDDDYMPGNIIEIQLHNFMTFSHLTCKPGPRLNLVIGPNGSGKSSLV
CAIALGLAGDPKLLGRAKDVGSFVKRGEESGYTQITLRGSTKEERITIMRKMDTSNKSEW
LLNGIVVPKKEIAEITERFNIQVSNLTQFLPQDRVCEFARLSPVNLLKETQKAVGDPQLP
IWRDALIEKSQEVKTLERAIESNEKTLDQHKAYIAEQQREVERVRQREELLAKAETMKKK
VPWLKYDMIKAEYLESKENEKEAKKKLDEAAKILNNLKEPIEKKKRDKDILKEKVKKIAT
RIDANAEKRINTLEDAESCGVKVQGSYKEMENLKRNEESRQQRILKAKEELAAAELELEN
MPPYEPPKAKIEEMRGQLSELRVSATEKMRQRQEKEKLLFQKRKALGENQERLKQIQGRN
MKLLQALKRSGCHRIVEAYDWVQSHRQDFKKEVYGPVLLEVNVPERHHANYLEGHAPNYV
WKSFITQDPHDRDLLVKSLKPFDVPTLNYVANQRFSSDPFQITDQMRALGIDSRLDQVFD
APFAVREVLVSQCHLDKSYIGSEKTDHMADEISKLGILDCWTPENHYRCTKSRYGNHVSA
TVDMVSQSRLFECNIDDKEIERLNAKITELEENITSLERSVRSLQSEGSLIDEEAAKLEK
EREEIIRVAQLESRKRRDMQNRIEQKKRKVESIEREDDLDTLMAKLIDDCAKYNHDRFRL
LMKFKDLLVESVKLKQTHAENHMAAIEFDAKIREMEINIKQNEKSAHQAAMHLEECKEAV
RYCQEKLSAAKRHAESVAVLTPELGKKFLEMPTTIEELEAAIQDYISQANGIFSLNRNVL
EEYEHRQRQIAALSTKLEDDKLKLQIHKEEIDQLKESWLPTLRNLVAQINETFGRNFKEM
AVAGEVSLEEHGMDYDQFGILIKVKFRQTGELKVLSAHHQSGGERSVSTILYLVSLQDLT
HCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNI
MNGPWIEQPAEVWSGGECWRNVTGVKAQ
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacctccctctaagcgacccaaaatcgtcagaggggatgatgattatatgcca
gggaacattattgagatacaactccataattttatgacttttagtcatttgacatgcaaa
cctggacctcggttgaaccttgtaattggaccaaatggatctgggaagagctcccttgta
tgtgctatagcacttggacttgctggtgatcctaagctgcttgggcgggcaaaagatgtt
ggttcttttgtgaagcggggagaggaatctggttatactcaaattaccttgcgaggctcc
actaaagaggagcgaattaccattatgcgaaaaatggatacgagtaacaagtctgagtgg
ttgttaaatggaatagtggtacctaagaaggaaattgctgaaataactgaaaggttcaac
atccaagtcagcaatttgactcagtttctgcctcaagacagagtctgtgaatttgcgagg
ttatctcctgtaaaccttctaaaagagactcaaaaggctgttggtgatcctcaacttcca
atttggcgtgatgcactaatagaaaaaagtcaggaagtgaagactttagagcgggctatt
gaatcaaatgaaaaaactttggatcagcataaggcatatattgctgagcaacaaagagag
gttgagcgagttcgtcaaagagaagaacttctagccaaggctgagaccatgaaaaagaaa
gtaccgtggctaaagtatgacatgataaaggctgaatatttggaatccaaggaaaacgag
aaagaggcaaagaaaaagctggatgaagctgcaaaaatactgaataatcttaaagaacct
atagagaaaaagaagcgagataaagatattcttaaagaaaaagttaaaaagatagctact
cgcattgatgctaatgctgaaaagcgtatcaatactctggaggatgcagaatcttgtggt
gtgaaagtgcaagggagttacaaagaaatggaaaacttgaagagaaatgaagaatctcgt
caacaaaggatcttaaaagccaaggaggagcttgctgctgctgaattagaattagaaaat
atgcctccttacgaacctcctaaggccaaaattgaagaaatgcgcggtcaactatcagaa
ctacgagtatccgcaactgaaaaaatgcgtcagaggcaagagaaggaaaaacttttgttt
caaaagaggaaagctctcggagagaaccaggagaggttaaaacagattcagggtagaaat
atgaaacttctgcaagcattgaaaagatctggatgtcacagaatagttgaagcttatgat
tgggtgcagagtcatcgtcaagattttaaaaaggaagtttatggtccggtgctgctagag
gttaatgtaccagagcgacatcatgccaactacttagaaggtcatgctcctaactacgtc
tggaagtctttcataactcaagatcctcatgaccgagatcttttagtcaaaagcttaaaa
ccatttgacgttccaactttaaactacgtggcaaaccaacgtttttctagtgatccattt
caaattactgaccagatgagggcacttgggatagattcacgactggaccaagtctttgat
gctccttttgctgtcagggaggttttggtttcccaatgccatttggataaatcgtatatt
gggtcagagaaaactgatcacatggctgatgagatctccaaactgggaattctcgattgc
tggactccagaaaatcactaccgttgtactaaatctagatatgggaatcatgtttctgca
actgtagatatggtgtcacagtcacgactttttgaatgcaatatagatgataaggaaata
gagaggctcaatgccaagattacggagctagaagaaaatattacttccttagaaagaagt
gttcgatcacttcagtctgagggaagtctcattgatgaggaagctgctaaacttgaaaaa
gaacgggaagagattataagagttgcgcaacttgaatcaaggaagcggcgcgatatgcaa
aaccgtattgaacaaaagaaacggaaagtagagtcgatagagagggaggatgacttggat
acccttatggcgaaactaattgatgactgtgcaaaatataaccatgatcgtttccgacta
ttaatgaaatttaaggatttacttgttgaatctgttaagctcaaacaaactcatgctgaa
aatcatatggccgccattgaatttgatgcaaagataagagaaatggagatcaatatcaag
caaaatgaaaaatctgctcatcaagcagcaatgcatcttgaggagtgtaaagaagcagtt
cgttattgtcaagagaaactttcagctgccaagaggcacgcagagtcggttgccgtgctt
actcctgaacttggaaagaaatttcttgagatgccaactacaattgaggaattggaagct
gcaattcaagattatatttctcaagccaatggtattttctccttgaaccgcaatgtattg
gaggaatacgaacaccgtcaacgtcagattgcagctctttcaacaaaattggaagacgac
aaattgaagctacagattcataaagaagaaatagatcaattgaaggagagttggcttcct
acattgagaaaccttgttgctcagattaatgagacattcggtcgtaacttcaaagaaatg
gctgttgcgggcgaagtttctttggaggagcatggcatggactatgaccaatttggtata
ctgataaaagtaaaattcagacaaacgggagagcttaaagtcctaagcgcacaccatcag
tccggaggggaacgctccgtttcaactatactctatcttgtttctctacaagaccttaca
cattgcccctttagggtggttgacgagataaatcaagggatggatcccattaatgaaaga
aagatgttccagcagttagttagggctgcaagccagccaaatacgccacagtgtttcttg
cttacccctaagttgcttccggagctagagtacagtgaagcatgcagtattctaaatata
atgaatggtccctggattgaacagcctgctgaagtttggagtggtggagaatgctggagg
aatgtgaccggcgttaaggcgcagtag
DBGET
integrated database retrieval system
