Cannabis sativa (hemp): 115711231
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Entry
115711231 CDS
T08987
Name
(RefSeq) vacuolar sorting protein 3-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115711231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115711231
Membrane trafficking [BR:
csav04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115711231
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps39_2
Clathrin
CNH
Vps39_1
Sema
Motif
Other DBs
NCBI-GeneID:
115711231
NCBI-ProteinID:
XP_030495419
LinkDB
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Position
3:93618268..93624343
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AA seq
955 aa
AA seq
DB search
MPSPMAINPNSRARTVLQPLSNFHLTPPTTSFRSIALYNLSNSQTLIYLGTNSGTLLLLS
ANPDHSKLSLLRSVTVTDGSSVESVQVFGGIGKVIVLSGEFLYLYDSFLLQPAKRLSFLK
GVRVFTKRMRSSENKLNGLNCEGSNAFAVVVGNRLVLVGIDSNVDELNVSYSILKDYQCI
DGISTMVWLNDSIIIGTANGYSLVSCVSGQSGVIFSLPDVSSLPKLKLLCKDWNVLLLVD
NVGVVVNADGQPVSGSIVFRLDPDSIGEVSLYIVAVKDGKMDLYHKKSGTCIQRVSFGGE
SVGGPCIIADEEDSEGELFVVASPTKVMCYRKLSPEEQIKDLLRKKNFKEAISLVEELEC
EGEITKNMVSFVHAQVGFLLIFDLRFEEAVNHFLLSDILQPSELFPFIMRDPNRWSLLVP
RNRYWGLHPPPAPLEDVVGEGLSAIQRAILLRKAGVETSVDDDFLSNPPSRAYILESAIK
SMIRYLEVSRNKELTPSVKEGVDTLLMYLYRAIDSVDDMEKLASAANSCVVEELETLLGD
SGHLRTLAFLYASRGMSSKALAIWRILARNYTSGLWKDNSLKSGLDDSGTHVLAGKETAA
AEASKILEESSDADLVLQHLGWIADINQVFAVQILTSEKRENQLPPDEVIAAIDPSKVEI
FQRYLQWLIEEQDSCDTRFHTLYALSLAKSTIETLDVETNSQNSDAGRIEEPTVFDPRTS
FIFETPVRERLQTFLQSSDLYDPEEILDLIEGSELWWEKAILYKKLGQETLVLQILALKL
EDSEAAEQYCADIGRPDAYMQLLDMYLDPQDGKEPMFKAAVRLLHNHGESLDPLQVLERL
SSDMPLQLASETILRMLRARLHHHRQGQIVHNLSRALHTDARLARLEERSRHVQINDESL
CDSCHARLGTKLFAMYPDDTIVCYKCFRRQGESTSVTGRDFKRDTLVKPGWLVTR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcccatggcgatcaaccccaattctagggctcgtacagtcctccaacctctc
tccaatttccacctcactccacccactacttcattccgatctattgctctttacaatctc
tcaaattcccaaactctcatttacctcggaaccaactccggcacccttcttttactctct
gcaaaccccgatcactccaaactctctctccttcgttccgttacagtcaccgatggttca
tcggttgagtccgtacaggtttttggtggaattgggaaagttattgttctttccggtgag
tttttgtatctgtacgattcgtttttgttgcaacccgcgaaaagattgagttttttgaag
ggggttagggtttttactaagcggatgagaagtagtgaaaataaattgaatgggttgaat
tgtgaaggtagtaatgcttttgctgttgttgttggtaatagattggttttggttgggatt
gattcaaatgttgatgagttaaatgtttcttattcgattcttaaggattatcagtgtatt
gatgggatttcgactatggtttggcttaatgattcgataattataggtactgctaatggg
tatagtttagtatcttgtgttagtggacagagtggtgtgatattttcattgcctgatgtt
tctagtttgccaaagcttaaacttttatgtaaagattggaatgtgctattgctggtggac
aatgttggtgtggtagttaatgctgatgggcaaccggtttctgggagcattgtttttcgg
ttagacccggattcgattggagaggtgtctttatatattgtggctgttaaagatggaaag
atggatttgtatcataagaaatcgggtacttgtattcagagagttagttttggtggtgag
agtgttggtgggccttgtattattgcagatgaggaagattcggaaggggaactttttgtt
gttgcatcacctaccaaggttatgtgctatcggaaattgtctcccgaagaacaaattaaa
gaccttttgagaaaaaagaacttcaaggaagctatttcgttagttgaggagcttgaatgt
gaaggtgaaataacaaagaacatggtctcctttgtacatgctcaagtggggtttctcttg
atttttgacttgcgttttgaggaagcagtgaatcactttctgctctctgatatcttgcag
ccttctgaattgtttccattcataatgcgagatccaaatcgatggtcattactggttcca
agaaaccggtattggggtttgcatcctccccctgcacctctggaagatgttgtaggtgaa
ggattgtcagctatccaaagggctatacttcttagaaaggcaggagtggaaacttcagtt
gatgatgattttctttcaaacccaccaagccgagcctatatattggagtctgccatcaag
tcaatgattaggtacttggaggtttctcgcaataaagagttgactccatcagtaaaagag
ggagttgatacactattaatgtacctctatagagctatagatagtgtggatgacatggag
aagttggcatcggctgcaaactcttgcgttgtggaggagttggaaactctattaggtgat
tctgggcatttacggacacttgctttcctatatgcaagtagaggaatgagctctaaggca
cttgctatttggcgtattcttgctcgaaattatacttcaggcctttggaaagataattct
ctgaagagcggcttagatgatagtggtacccatgttcttgctggtaaggagactgctgct
gctgaggcatccaagattcttgaggagtcatctgatgcagaccttgttcttcaacatctt
ggatggatcgcagatatcaatcaggttttcgcagttcagattttaacgtcagaaaaacga
gaaaaccaacttcctccagatgaagttattgcagctattgatccatcaaaagtagagata
tttcaaaggtaccttcagtggttgattgaagagcaagattcttgtgacactcggttccat
acattatacgcactttccctcgccaaatcaacgattgaaaccttagatgtagaaacaaat
tctcagaactctgatgctggaaggatagaggagccaacagtttttgatcccagaacaagt
tttatttttgaaactcctgttcgtgaaagactccaaacattcttacagtcttcggacttg
tatgatccagaggagatccttgatttgattgaaggatcagagctttggtgggaaaaggcg
attctttacaaaaagctagggcaagagacattggtgcttcagatcttggccttgaagctg
gaagacagtgaagctgccgaacagtattgtgctgatattgggagacccgatgcctacatg
cagttgcttgatatgtatttggatccacaagatggtaaggagcctatgtttaaggctgct
gttcgccttctccacaatcacggagagtctctggatccattacaagtcttagagagattg
tcttctgatatgcctcttcaacttgcttctgaaacaatattaagaatgttgagagctcgg
cttcatcaccatcgccaaggacagattgtgcataatttatctcgtgctttgcacactgat
gcaagattggcgagattagaagaaagatcaaggcacgtgcagatcaatgacgagagcctt
tgtgattcgtgtcatgctcgccttggaacaaaactctttgctatgtatccagatgacacc
attgtctgttacaagtgttttcgtcgacaaggagaatcaacttcagttacaggtcgcgat
tttaagcgagatacactagtaaaaccaggctggctcgtgactagatga
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