KEGG   Cannabis sativa (hemp): 115711231
Entry
115711231         CDS       T08987                                 
Name
(RefSeq) vacuolar sorting protein 3-like
  KO
K20177  vacuolar protein sorting-associated protein 3
Organism
csav  Cannabis sativa (hemp)
Pathway
csav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:csav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    115711231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csav04131]
    115711231
Membrane trafficking [BR:csav04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    115711231
SSDB
Motif
Pfam: Vps39_2 Clathrin CNH Vps39_1 Sema
Other DBs
NCBI-GeneID: 115711231
NCBI-ProteinID: XP_030495419
LinkDB
Position
3:93618268..93624343
AA seq 955 aa
MPSPMAINPNSRARTVLQPLSNFHLTPPTTSFRSIALYNLSNSQTLIYLGTNSGTLLLLS
ANPDHSKLSLLRSVTVTDGSSVESVQVFGGIGKVIVLSGEFLYLYDSFLLQPAKRLSFLK
GVRVFTKRMRSSENKLNGLNCEGSNAFAVVVGNRLVLVGIDSNVDELNVSYSILKDYQCI
DGISTMVWLNDSIIIGTANGYSLVSCVSGQSGVIFSLPDVSSLPKLKLLCKDWNVLLLVD
NVGVVVNADGQPVSGSIVFRLDPDSIGEVSLYIVAVKDGKMDLYHKKSGTCIQRVSFGGE
SVGGPCIIADEEDSEGELFVVASPTKVMCYRKLSPEEQIKDLLRKKNFKEAISLVEELEC
EGEITKNMVSFVHAQVGFLLIFDLRFEEAVNHFLLSDILQPSELFPFIMRDPNRWSLLVP
RNRYWGLHPPPAPLEDVVGEGLSAIQRAILLRKAGVETSVDDDFLSNPPSRAYILESAIK
SMIRYLEVSRNKELTPSVKEGVDTLLMYLYRAIDSVDDMEKLASAANSCVVEELETLLGD
SGHLRTLAFLYASRGMSSKALAIWRILARNYTSGLWKDNSLKSGLDDSGTHVLAGKETAA
AEASKILEESSDADLVLQHLGWIADINQVFAVQILTSEKRENQLPPDEVIAAIDPSKVEI
FQRYLQWLIEEQDSCDTRFHTLYALSLAKSTIETLDVETNSQNSDAGRIEEPTVFDPRTS
FIFETPVRERLQTFLQSSDLYDPEEILDLIEGSELWWEKAILYKKLGQETLVLQILALKL
EDSEAAEQYCADIGRPDAYMQLLDMYLDPQDGKEPMFKAAVRLLHNHGESLDPLQVLERL
SSDMPLQLASETILRMLRARLHHHRQGQIVHNLSRALHTDARLARLEERSRHVQINDESL
CDSCHARLGTKLFAMYPDDTIVCYKCFRRQGESTSVTGRDFKRDTLVKPGWLVTR
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgccttctcccatggcgatcaaccccaattctagggctcgtacagtcctccaacctctc
tccaatttccacctcactccacccactacttcattccgatctattgctctttacaatctc
tcaaattcccaaactctcatttacctcggaaccaactccggcacccttcttttactctct
gcaaaccccgatcactccaaactctctctccttcgttccgttacagtcaccgatggttca
tcggttgagtccgtacaggtttttggtggaattgggaaagttattgttctttccggtgag
tttttgtatctgtacgattcgtttttgttgcaacccgcgaaaagattgagttttttgaag
ggggttagggtttttactaagcggatgagaagtagtgaaaataaattgaatgggttgaat
tgtgaaggtagtaatgcttttgctgttgttgttggtaatagattggttttggttgggatt
gattcaaatgttgatgagttaaatgtttcttattcgattcttaaggattatcagtgtatt
gatgggatttcgactatggtttggcttaatgattcgataattataggtactgctaatggg
tatagtttagtatcttgtgttagtggacagagtggtgtgatattttcattgcctgatgtt
tctagtttgccaaagcttaaacttttatgtaaagattggaatgtgctattgctggtggac
aatgttggtgtggtagttaatgctgatgggcaaccggtttctgggagcattgtttttcgg
ttagacccggattcgattggagaggtgtctttatatattgtggctgttaaagatggaaag
atggatttgtatcataagaaatcgggtacttgtattcagagagttagttttggtggtgag
agtgttggtgggccttgtattattgcagatgaggaagattcggaaggggaactttttgtt
gttgcatcacctaccaaggttatgtgctatcggaaattgtctcccgaagaacaaattaaa
gaccttttgagaaaaaagaacttcaaggaagctatttcgttagttgaggagcttgaatgt
gaaggtgaaataacaaagaacatggtctcctttgtacatgctcaagtggggtttctcttg
atttttgacttgcgttttgaggaagcagtgaatcactttctgctctctgatatcttgcag
ccttctgaattgtttccattcataatgcgagatccaaatcgatggtcattactggttcca
agaaaccggtattggggtttgcatcctccccctgcacctctggaagatgttgtaggtgaa
ggattgtcagctatccaaagggctatacttcttagaaaggcaggagtggaaacttcagtt
gatgatgattttctttcaaacccaccaagccgagcctatatattggagtctgccatcaag
tcaatgattaggtacttggaggtttctcgcaataaagagttgactccatcagtaaaagag
ggagttgatacactattaatgtacctctatagagctatagatagtgtggatgacatggag
aagttggcatcggctgcaaactcttgcgttgtggaggagttggaaactctattaggtgat
tctgggcatttacggacacttgctttcctatatgcaagtagaggaatgagctctaaggca
cttgctatttggcgtattcttgctcgaaattatacttcaggcctttggaaagataattct
ctgaagagcggcttagatgatagtggtacccatgttcttgctggtaaggagactgctgct
gctgaggcatccaagattcttgaggagtcatctgatgcagaccttgttcttcaacatctt
ggatggatcgcagatatcaatcaggttttcgcagttcagattttaacgtcagaaaaacga
gaaaaccaacttcctccagatgaagttattgcagctattgatccatcaaaagtagagata
tttcaaaggtaccttcagtggttgattgaagagcaagattcttgtgacactcggttccat
acattatacgcactttccctcgccaaatcaacgattgaaaccttagatgtagaaacaaat
tctcagaactctgatgctggaaggatagaggagccaacagtttttgatcccagaacaagt
tttatttttgaaactcctgttcgtgaaagactccaaacattcttacagtcttcggacttg
tatgatccagaggagatccttgatttgattgaaggatcagagctttggtgggaaaaggcg
attctttacaaaaagctagggcaagagacattggtgcttcagatcttggccttgaagctg
gaagacagtgaagctgccgaacagtattgtgctgatattgggagacccgatgcctacatg
cagttgcttgatatgtatttggatccacaagatggtaaggagcctatgtttaaggctgct
gttcgccttctccacaatcacggagagtctctggatccattacaagtcttagagagattg
tcttctgatatgcctcttcaacttgcttctgaaacaatattaagaatgttgagagctcgg
cttcatcaccatcgccaaggacagattgtgcataatttatctcgtgctttgcacactgat
gcaagattggcgagattagaagaaagatcaaggcacgtgcagatcaatgacgagagcctt
tgtgattcgtgtcatgctcgccttggaacaaaactctttgctatgtatccagatgacacc
attgtctgttacaagtgttttcgtcgacaaggagaatcaacttcagttacaggtcgcgat
tttaagcgagatacactagtaaaaccaggctggctcgtgactagatga

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