Cannabis sativa (hemp): 115714770
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Entry
115714770 CDS
T08987
Name
(RefSeq) homeobox-leucine zipper protein HDG11
KO
K09338
homeobox-leucine zipper protein
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csav03000
]
115714770
Transcription factors [BR:
csav03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
115714770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115714770
NCBI-ProteinID:
XP_030499384
LinkDB
All DBs
Position
4:18199201..18204059
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AA seq
734 aa
AA seq
DB search
MEYASGGGGGSGGGDNDASNAQRRKKRYHRHTAHQIQKLESMFKECPHPDEKQRLQLSRE
LGLAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENIAIREALKNVICPSCGGP
PPIEDPYFDDQKLRMENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASF
PQGMGIGLGCGGGGGGGCTSLDLDLLPGSSSTMPTMPYQPPGISDMDKSLMSDIATNAME
ELLRLLQPNEPFWMRPSSGDGRDVLNLDNYDRNFPRANTHMKNPNLRIEASKDTGVVIMN
GLALVDMFMDPNKWAELFPNIVSMARTLEVISSGGLGSHSSTLQLMYAELQVLSPLVPTR
EFYFLRYCHQIEQGLWAVVDVSYDFPRDNQFVNQCRCHRLPSGCLIQDMPNGYSKVTWVE
HIEIEDKVPTHRLYRDLVHSGMAFGAERWLTTLQRMCERYACLMVSGTSTRELGGVIPSP
DGKRSLMKLAQRMVNHFCASVSSSTSNGQRWTTLSGTGINEVGVRVTVHKSTDPGQPNGV
VLSAATTIWLPVSPQDVFNFFKDERTRAQWDVLSNGNAVQEVAHIANGSHHGNCISVLRA
FNTSQNNMLILQESCVDSSGSMVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISPDGRA
SQGGGGGGGGGDGASTSAGAGSSQSGGSLITVAFQILVSSLPSAKLNMESVNTVNNLIGN
TVQQIKTALNCPTS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaatacgcgagtggaggcggcggcggttctggcggaggagacaacgatgcttccaac
gctcaaaggaggaaaaagcgataccatcgtcacactgctcaccagattcaaaagcttgaa
tcaatgttcaaggagtgcccccacccagatgaaaagcaaaggctacagttgagcagagaa
ttgggtttggctccaagacagatcaaattttggtttcaaaacaggagaacccagatgaag
gctcaacatgagagagctgacaactgtgctctccgagcagagaatgacaagatccgatgt
gagaacattgccatcagagaagcacttaagaatgttatctgcccatcttgtgggggtcca
cccccaattgaggatccatattttgatgatcaaaaacttcgaatggaaaatgcccaattg
aaagaagagcttgacagagtttctagcattgctgctaagtacataggaagaccaatatct
caacttccaccagttcagccaattcacatctcttctttggatttatccatggcgagtttt
cctcaagggatggggattggacttggttgtggtggtggtggtggtggtggttgcacttct
ctcgaccttgatcttctccccggaagctcttccaccatgcccactatgccttatcaacca
cctggaatttcagacatggacaagtctctcatgtctgacattgcaacaaacgctatggaa
gagcttctcaggcttctccagccaaacgagcctttttggatgaggccatcctcaggagat
ggcagagacgtccttaatctcgataactacgacagaaatttccccagagccaatactcac
atgaagaatcctaatctaagaattgaagcctcaaaagatactggcgttgtgattatgaat
ggtttggcattagttgacatgttcatggacccgaacaaatgggctgagctatttccaaat
attgtttcaatggcgagaacacttgaagtcatatcatctggcgggttaggaagccatagt
agcacattgcagctgatgtatgcagagttgcaggttctctccccattggttcccacaaga
gaattttacttccttcgttactgtcaccaaattgagcaaggactttgggcagtcgtcgat
gtttcgtacgattttcctcgagacaaccagtttgttaatcaatgtcgttgtcatcgtctt
ccttctggatgcttaatacaagacatgcccaatggatattcaaaggttacttgggttgaa
catattgaaatagaagacaaagtaccaactcacaggctgtatagagacctagttcacagt
ggcatggcttttggagctgaaaggtggctaacaactcttcaaagaatgtgtgaaagatat
gcttgtttaatggtatcaggcacttccactcgtgaacttggtggagtgattccttctcct
gatggcaaaagaagtctgatgaaattagctcaaaggatggtgaaccatttctgtgcgagc
gttagtagtagtacctccaatggccaacggtggacgacactttccggtaccggtattaac
gaagtcggagtccgagtcaccgtccataagagcaccgatcccggtcaacccaatggggtt
gttctcagtgcagctaccaccatttggcttccggtttctcctcaagatgttttcaatttt
ttcaaggacgaaagaactcgcgctcagtgggatgttctctcaaatggcaacgcagttcaa
gaagtagctcacattgcaaatggatcccaccatggaaactgtatttctgttcttcgagct
ttcaacaccagccagaacaatatgctgatactccaagagagctgcgtagactcatcaggg
tcaatggtggtgtactgcccagttgatcttccggcaatcaacattgccatgagcggcgag
gacccgtcctacattcccctccttccctcgggcttcactatctcacctgacggaagggcg
agtcaaggaggaggaggaggaggaggaggaggggacggtgcatcgaccagcgcgggggcg
ggttctagccaatcaggtgggtcgctcataacagtggcgttccagatacttgtgagcagc
ttgccttctgcaaagctgaatatggaatcggtgaatactgttaataaccttattggcaat
actgtccagcaaatcaagactgccttgaactgtcctacttcctaa
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