Cannabis sativa (hemp): 115716455
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Entry
115716455 CDS
T08987
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115716455
03400 DNA repair and recombination proteins [BR:
csav03400
]
115716455
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115716455
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
115716455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
ATG17_like
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
115716455
NCBI-ProteinID:
XP_030501120
LinkDB
All DBs
Position
5:3547210..3558823
Genome browser
AA seq
1577 aa
AA seq
DB search
MEREALYQKGKKRPLVGINDEIYRFKVLLPNGTTIGLTLPEPGPKMPVDEFINLVKGEYY
RRSKSMQCKGRINWNAGSLSLQDSNDAKITSAVYFKDFKPHKCHILILRDGSGKVTETFE
NMWDLTPDTDLLKEVPESYTFETALADLIDNSLQAVWSNSKNDQRLISVDILQDKIVIFD
TGTGMDGTDENSIAKWGIMGASLNRSEKEQAIGGKPPYLMPSFGMFGYGGSFASMHLGRH
ALVSSKTKHSKKVYTLRLEREALLSRSGSELKWTTAGGLRDPSDDELAKTRHGSFTKVEI
FEPNIKTSDILGLQCRLKDIYFPYIQCDEMSKSGRTITPISFQVNDTDLAEIDGGEVATT
NLHSCNGPDFVLQVHFSFKQDSKTKSPAVSGSRPYQEANARLKCVYFPVVKGKENIERIL
EKLKDEGHDVSENYENFSRVSIRRLGRLIPDARWAWLPFMDLRHKKGSAAQSLKKCCLRV
KCFIDADAGINPTPSKTDLAHHSPFTTALRNFGSNLHENEKGIDIRVYKDEKLLNSSQLE
SEYRDWLLQMHNQYDEEVDHGEDEAVLVLSPCSGKGKKTGISSDVSRLNKIIKRKEKIWE
AGQRIKIFKGACAGVYKSNVYATIEYFLFRGLQGDAGGDGQIICRPLGTPERDGCVLSEC
DGMMSVNMNSSLSLPVSLIDVEKCLPVEDTEWNNQMDKWLQKSPSTIDLLSPKECEGLEV
GVEELLANVTAGKVPPKEVVAVVRPANYVRKGDSRVLDQRYIFKCNIDMSMEVKFIGEEK
DPHKDEHVYSKRVSPSSNHGVHGIYVFPLRCKQKLPHLFQKAGVYKFSFSLIDLSCEKLV
KSVKVEASSQIKNWALLRDKRNQSFSVSVGSTLRPFSIACYDIYGNRASFQSNPEVVVKL
QANKDLEFHVKNIESGLSISKRTLKIEDLLIESSDLDKLRPDYKATLLVSSSNGKFSVSI
PCHVTPGCLQLVKAQQAFLANQLLPGCTVEEFELEMLDEYGNHVVEGFEVQVDVDGFQML
DQLGPRRKVDSHGCVDLSGLLKVTAGYGENVSLSVSSKNKVFFKQQFHIERRELRIVSKV
PEILTTGSILEDVIFEIVNSEGIVDEAINDEQKTGQSHMLAIKADWFDMESTTRYTFKHG
RCIVPAIPLSKTEGNFCFLAFHSRHSNLSVNVKVHVIKPAIPTPKLEYNTISSTPPLLLQ
DSCSVNQVGVNYYMLMENKKKALEEKICKAGLTIQSVEEKYAKLNKRKEEIEQAIKELQD
STEQHQLGMLNHLSTKEEVIEEIEKISNSAAAVLVNISRGVPFREPDNHLMKGIIGVVAL
LGSVQCGQLSRILSEYLGIDQMLAVVARSFEAAAQFETYTQTGEVDRNNALHAEAAILGK
SINGRFTVICFDNINPYRGGSDDHHQRKLAIPLPCFIDGTIPKGFLGFAVNMIDLDEDQL
SIKNSSGHGLRETVFYRLLGQLQVYQTREDMLAAWACIKHGAVSLDGGILKENGVLSFGF
SDPQVCFQVVTTNDEMPLSQENLKLLEDQKSELKSINDMIKQNIKHHGLALNSFKKTKKE
LKKMMDELETCIGSNTQ
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggaagcattgtaccagaaaggaaagaagaggccgctggttggaatcaatgat
gaaatatataggtttaaagttttattacctaatgggacaactattggattgactttgccg
gaacctggtccaaaaatgccagttgatgagttcattaatttggtgaaaggtgaatattat
cgacgttctaaatcaatgcaatgtaaaggacggattaactggaatgctggttctttatct
cttcaagattcaaatgatgccaagatcacaagcgctgtgtatttcaaggattttaaacca
cataagtgccacattttaatacttcgtgatggctctggcaaagttactgaaacttttgag
aatatgtgggatttgacgcctgataccgacctgttaaaggaggtcccagaatcgtacaca
tttgaaactgcccttgcagatttgattgacaattctctgcaagcagtatggtcaaacagt
aaaaatgatcaaagacttattagtgtggacatattacaggataagattgtaatctttgac
acaggtacaggaatggatggcactgatgagaattctatagcaaaatggggaattatgggt
gcctcacttaaccggtctgaaaaagaacaggctattgggggcaagcctccatatctaatg
ccttcttttggcatgtttgggtatgggggatcttttgcatctatgcatttagggagacat
gctttagtatcttcaaaaacaaagcactcaaagaaggtatatactttacgtctagagaga
gaggctttgctcagccgttctggctctgaacttaaatggacgactgctggaggtcttagg
gatccttcagacgatgagcttgcaaaaacaagacacggaagttttactaaggttgaaatt
tttgaaccaaatataaagacttcagacatcttaggacttcaatgcagactgaaagacata
tactttccatatattcagtgtgatgagatgtccaagtcagggaggacaattacaccgata
tcatttcaggttaatgacactgatttggctgagatcgatggtggtgaagttgccactaca
aacttgcattcttgcaatggtcctgattttgtcttacaagttcatttctcctttaagcag
gacagtaaaaccaagagtccagctgtgtcaggatcaaggccatatcaagaagccaatgca
cggctgaaatgtgtgtattttcctgttgttaagggaaaagagaatattgagaggattttg
gagaagttaaaagatgaaggacatgatgtctctgaaaattatgaaaactttagtcgcgtt
tctatccggaggcttggtcgtctcataccagatgctcgttgggcatggctgcctttcatg
gacttgaggcataaaaagggaagtgcagcacagtcattgaagaaatgttgtttaagagtc
aaatgctttattgatgctgatgctggtatcaatccaacaccatccaagactgatttggca
caccacagtccttttactactgctctaaggaattttggcagtaatcttcacgagaatgaa
aaaggaatagatatcagagtttataaggatgagaagttactgaattcttcgcaactagag
agtgaatatcgggattggctccttcaaatgcacaaccagtatgatgaagaagttgaccac
ggcgaagatgaagctgtacttgttcttagtccatgctcaggaaaggggaagaaaactggc
atctcatctgatgtttcaaggcttaacaaaatcattaagaggaaggagaaaatatgggaa
gctggacaaaggattaaaatttttaagggagcatgtgctggtgtttataaaagtaatgtc
tacgcaacaatagaatattttttatttagaggtctccaaggggatgcaggtggagatggt
cagattatttgcaggccacttggtacaccagaaagggatgggtgtgttctttccgaatgt
gatgggatgatgagtgttaatatgaatagctccttgtctttacctgttagtctgattgat
gtcgaaaagtgcttacctgttgaagatactgaatggaataaccagatggataagtggctt
cagaaatctccgtctacaattgacttgctaagtccaaaagaatgtgaaggattagaggtt
ggggtagaggaattgcttgccaatgtaactgctggaaaagttcctcctaaggaagtggta
gcagttgttcgtcctgccaattatgtacgtaaaggtgattcaagagtgctggatcagaga
tatatttttaagtgtaatatagacatgtcgatggaagtaaagttcattggtgaagagaaa
gatcctcataaagatgaacatgtttattcaaagcgtgtatcaccttcttcaaatcatgga
gtacatggtatctatgtctttccgctaaggtgcaagcagaagctcccacatttgtttcaa
aaagcaggggtctacaaattttcattttctcttattgatttaagttgtgagaagcttgtc
aaaagtgtcaaagtcgaggcatcttctcagatcaagaattgggcacttttaagagataag
cggaaccaatcatttagtgtgagtgttggttcaactttgagacctttctccattgcatgt
tacgatatctatggcaatagagcttcttttcaatctaatcctgaagttgtggtcaagctc
caagcaaacaaagacttagaatttcatgttaaaaatattgagagtggcctttcaatttca
aagcgaacactaaaaattgaggacttactgattgaaagtagtgacttggataagctccga
cctgattacaaagccactctcctagtatctagctcaaatgggaaattctctgtttccatt
ccttgccatgttactccaggttgcttacaacttgttaaagcccaacaagcatttttggct
aatcaacttttaccaggttgcactgtcgaggagtttgaattagagatgttggatgaatat
ggtaatcatgttgtagaaggctttgaagttcaggttgatgtagacggatttcagatgctt
gatcaactaggcccgaggcgtaaggtggactctcatggatgtgttgaccttagtggcctc
ttgaaagtaacagctggttatggagagaatgtatctctctctgtatcatcaaagaataaa
gtgtttttcaaacaacagtttcacattgagagaagggaactaagaattgtgtcgaaggta
cctgagattcttacgactggttccatactggaagatgtcatttttgaaattgtgaactct
gagggcattgttgatgaagctatcaacgatgaacagaaaactggccaatcacatatgctc
gcaattaaggctgattggtttgatatggagtcgactacacgatatacttttaagcatggg
cggtgcattgttccggctattcctctatctaaaactgaggggaacttttgtttcttagct
ttccactctcgccattcaaaccttagtgtgaatgttaaggttcatgtaattaaacctgcg
ataccaacacccaagttggagtataatactatttcatctactcctccattgcttcttcag
gactcgtgttcagttaatcaagttggagtaaactattacatgttaatggagaataagaaa
aaggctcttgaagagaagatatgtaaagctggtttgacaatccaatcagtggaagaaaag
tatgctaagttaaataaaaggaaggaagaaattgagcaagctataaaagaattgcaagat
tctactgaacaacatcaattggggatgttaaatcacttgtccacgaaagaagaggtgatc
gaggaaatagaaaagataagtaactctgctgctgcagttcttgtcaatatttctagagga
gttccatttcgggagccagataatcatttaatgaaaggcataataggggtggttgctcta
cttggtagtgttcaatgtggccagcttagcaggatattatcggaatacttgggtatagat
caaatgcttgctgttgtcgctagatcttttgaagctgctgctcaatttgaaacatacaca
caaactggtgaagttgatcgcaacaatgctcttcatgctgaagcagccattcttgggaaa
tccataaatggtcggtttactgtgatatgctttgacaatataaatccatacagaggtggt
tctgatgatcaccatcaaaggaagctggctataccacttccttgttttattgatggaacc
atccccaaaggttttctgggatttgctgtaaatatgattgatttagatgaagatcagttg
tccattaaaaacagctcaggccatggtcttagagagacggtattctatcgcctgcttggt
caactacaagtttaccaaaccagagaagatatgctcgctgcctgggcttgtataaaacat
ggcgctgtatcgctagacggtggaatcttaaaagaaaatggtgtactgtctttcggattc
agtgatccccaagtatgttttcaagttgtaacaacaaatgatgaaatgcccctttcacaa
gaaaatttaaagctgcttgaagaccagaaatcagagctaaaaagcataaatgatatgata
aaacaaaatatcaaacatcacgggctagctttaaactctttcaagaagacaaagaaagag
ttaaagaagatgatggacgaattagaaacttgtataggatccaacacacaatag
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integrated database retrieval system
