Cannabis sativa (hemp): 115719134
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Entry
115719134 CDS
T08987
Name
(RefSeq) histone deacetylase 9
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03082
ATP-dependent chromatin remodeling
csav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115719134
03083 Polycomb repressive complex
115719134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115719134
Enzymes [BR:
csav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115719134
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
115719134
HDAC complexes
Sin3A-HDAC complex
115719134
BRAF-HDAC complex
115719134
REST complex
115719134
SHIP complex
115719134
MiDAC complex
115719134
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
115719134
Heterochromatin formation proteins
Other heterochromatin formation proteins
115719134
Chromatin remodeling factors
NuRD complex
115719134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
115719134
NCBI-ProteinID:
XP_030503922
LinkDB
All DBs
Position
2:73837..77759
Genome browser
AA seq
431 aa
AA seq
DB search
MKSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHTADYVDFLHRITPDTQRLFSNELVKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDKFFPGTGDVKDSGEREGKFYAINVPLKDGIDDNSFTRLFKT
IISKVVETYRPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNDYIEYFGPEYSLKIPHGHIIDNANTKSYLSTI
KVQVLENLRHIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQQTRDKQIQREDEYYEG
DNDHDQNTEDV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaggacagaatctcttacttctatgatggagatgtgggaagtgtttacttt
gggccgaaccatccgatgaaacctcatcggttgtgtatgactcatcacctggttctctcc
tatgatcttcacaagaagatggaaatctatcggcctcacaaggcatatccagttgagctt
gctcaattccatacagcggattatgttgatttccttcaccgtatcacccccgacacccag
cgtctattctcaaatgaactagtcaaatataatcttggagaagattgtccagtctttgaa
aatttatttgagttctgtcaaatttatgctggtggaacaatagatgctgctcgcaggttg
aacaaccaactctgtgacattgctataaattgggctggtggcctacaccatgccaagaag
tgcgaagcatctgggttttgctatataaatgacctggtcttgggaatcttggagctttta
aaacatcatgctcgtgttttgtatattgatatcgatgtgcatcacggtgatggtgttgaa
gaagccttttatttcactgatagggtgatgactgttagttttcacaagtttggagacaag
ttttttcctggaaccggtgatgtcaaggattcaggagagagggaaggcaagttttatgcc
attaatgttccactcaaggatggaatagatgacaatagcttcactcgtcttttcaaaact
attatttccaaggttgttgaaacgtatcgaccaggtgtcatagtcctccagtgtggagca
gattcactagctggagatcgcttaggctgcttcaatctttccattgatggtcatgctgag
tgtgttaagtttgtgaagaaattcaacttgcccttactggttactggaggtggcggatac
acaaaagagaatgttgctcggtgttggactgttgaaactggagttcttctagacacagag
cttccaaacgagatccccgacaacgattacattgaatattttgggccagaatattcattg
aagattccacatgggcatataatagataatgcaaacacgaaatcgtatcttagtacaatc
aaagtgcaggtgttggagaatcttcgtcacattcaacatgctcctagtgtacaaatgcaa
gaggttcctccggacttctatatccctgattttgatgaagatgagcagaatccagacgag
cgagtggatcaacaaacccgggacaagcaaatccagcgggaggacgagtattatgaagga
gacaatgaccatgatcagaacactgaagatgtgtaa
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integrated database retrieval system