KEGG   Cannabis sativa (hemp): 115719134
Entry
115719134         CDS       T08987                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03082  ATP-dependent chromatin remodeling
csav03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115719134
   03083 Polycomb repressive complex
    115719134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csav03036]
    115719134
Enzymes [BR:csav01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     115719134
Chromosome and associated proteins [BR:csav03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     115719134
   HDAC complexes
    Sin3A-HDAC complex
     115719134
    BRAF-HDAC complex
     115719134
    REST complex
     115719134
    SHIP complex
     115719134
    MiDAC complex
     115719134
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     115719134
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    115719134
  Chromatin remodeling factors
   NuRD complex
    115719134
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 115719134
NCBI-ProteinID: XP_030503922
LinkDB
Position
2:73837..77759
AA seq 431 aa
MKSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHTADYVDFLHRITPDTQRLFSNELVKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDKFFPGTGDVKDSGEREGKFYAINVPLKDGIDDNSFTRLFKT
IISKVVETYRPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNDYIEYFGPEYSLKIPHGHIIDNANTKSYLSTI
KVQVLENLRHIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQQTRDKQIQREDEYYEG
DNDHDQNTEDV
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgaaatccaaggacagaatctcttacttctatgatggagatgtgggaagtgtttacttt
gggccgaaccatccgatgaaacctcatcggttgtgtatgactcatcacctggttctctcc
tatgatcttcacaagaagatggaaatctatcggcctcacaaggcatatccagttgagctt
gctcaattccatacagcggattatgttgatttccttcaccgtatcacccccgacacccag
cgtctattctcaaatgaactagtcaaatataatcttggagaagattgtccagtctttgaa
aatttatttgagttctgtcaaatttatgctggtggaacaatagatgctgctcgcaggttg
aacaaccaactctgtgacattgctataaattgggctggtggcctacaccatgccaagaag
tgcgaagcatctgggttttgctatataaatgacctggtcttgggaatcttggagctttta
aaacatcatgctcgtgttttgtatattgatatcgatgtgcatcacggtgatggtgttgaa
gaagccttttatttcactgatagggtgatgactgttagttttcacaagtttggagacaag
ttttttcctggaaccggtgatgtcaaggattcaggagagagggaaggcaagttttatgcc
attaatgttccactcaaggatggaatagatgacaatagcttcactcgtcttttcaaaact
attatttccaaggttgttgaaacgtatcgaccaggtgtcatagtcctccagtgtggagca
gattcactagctggagatcgcttaggctgcttcaatctttccattgatggtcatgctgag
tgtgttaagtttgtgaagaaattcaacttgcccttactggttactggaggtggcggatac
acaaaagagaatgttgctcggtgttggactgttgaaactggagttcttctagacacagag
cttccaaacgagatccccgacaacgattacattgaatattttgggccagaatattcattg
aagattccacatgggcatataatagataatgcaaacacgaaatcgtatcttagtacaatc
aaagtgcaggtgttggagaatcttcgtcacattcaacatgctcctagtgtacaaatgcaa
gaggttcctccggacttctatatccctgattttgatgaagatgagcagaatccagacgag
cgagtggatcaacaaacccgggacaagcaaatccagcgggaggacgagtattatgaagga
gacaatgaccatgatcagaacactgaagatgtgtaa

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