Clostridium scindens: HDCHBGLK_00146
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Entry
HDCHBGLK_00146 CDS
T06591
Symbol
lytB_1
Name
(GenBank) Amidase enhancer
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
csci
Clostridium scindens
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csci01011
]
HDCHBGLK_00146 (lytB_1)
Enzymes [BR:
csci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HDCHBGLK_00146 (lytB_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
csci01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HDCHBGLK_00146 (lytB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
QBF72801
UniProt:
A0A494WKY4
LinkDB
All DBs
Position
complement(154824..156236)
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AA seq
470 aa
AA seq
DB search
MNQNKWSRNRRNRYNWNKSRRNKYRWNRLLCSVNKWTKGRNLYYGLAIAASLLIISGLLS
SLTLREEEKVKKQPDTSGRHAEEGQEPQLTDNPNIRVLIMTTGHAGIVHPGVEVSSAAGL
VLSFGEEQQEIEPGQKAAFAPDDERFAKGNIRIQAKDGGEVTLDSIQRGYGVPSYAGTLE
LRTTAEGIVIINELPVETYLCKVVPSEMPASYELEALKAQAVCARSYAYQQMAEYGYPEY
EAHVNDSTDYQVYGNSQAQEASSQAVNETQGQVARFNGQIVTTYYYSTSCGKTTSLEAWG
TEPNEQNQYLQTVEVKDEEGDYERELPWYRWEARIQVQTLSNLVGLNTATDVGMLQNVEV
TRTGPGGVALQICATGDKGSVTVDTENKIRRALGGSGYEIQKQDGNTVASSALLPSAFFT
IGKEGDTFVIKGGGYGHGIGMSQNGANEMARKGKTYIDILTLFFPGITVE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaaaacaagtggagccgaaatagacggaaccgatataattggaataagagcaga
cggaataagtatagatggaacaggctgctatgcagcgtgaacaaatggacaaagggaaga
aacttatactatggactggctatagcagccagcctgctgattatcagcggcctgctctct
tccttgaccttgcgggaagaagaaaaggtgaaaaagcagccggatacatccgggcggcat
gcagaagagggacaagaaccgcaattgacggataatcccaacattcgcgtgcttattatg
actaccggacatgcaggaatagtgcatccgggcgtggaagtgtcatcggcagcaggcttg
gttctgtctttcggggaggagcagcaggagatcgagccaggccagaaggcggcatttgcg
ccggatgacgagcggtttgccaagggcaatattcgcattcaggcgaaagatgggggagag
gttacgctggatagcattcagagaggatacggcgtgccttcctatgccgggacgctggaa
cttcggactacggcggaaggtattgtcatcatcaatgagcttccggttgaaacgtacctg
tgcaaggtcgtgcccagcgagatgccggcatcctatgaactggaagcgctgaaagcgcag
gcagtctgcgccagaagctatgcctatcagcagatggcagagtatgggtacccggaatac
gaagcgcacgtaaacgacagcacggattaccaggtatatggcaattcccaagctcaggag
gcgtcaagccaggctgtgaatgagacgcaggggcaggtggcaagattcaacggtcagatt
gtgactacatactattattccacttcctgtggaaaaacgacaagcctggaagcctggggg
acggaaccgaatgagcagaaccagtatcttcagaccgttgaggtaaaggacgaagagggg
gactatgaaagagaactgccatggtaccggtgggaggccagaattcaggtacagactctc
tccaacctggtaggccttaatacggcaaccgatgtaggcatgctgcaaaacgtagaggtg
accaggacagggccgggaggcgttgcgcttcagatatgcgccacaggagataagggtagc
gtaacggtggacacggagaataagatccgcagggcattaggaggcagcggatatgagatt
cagaagcaggatggaaacactgtggcgagttccgcgcttctgccaagcgcattctttacc
atagggaaagagggggatacatttgttataaaaggcggcggatatgggcatggtataggc
atgagccagaatggcgccaatgagatggccaggaaaggcaagacttacatagatatactt
acccttttcttcccgggcattaccgtagaatga
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