Clostridium scindens: HDCHBGLK_01424
Help
Entry
HDCHBGLK_01424 CDS
T06591
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
csci
Clostridium scindens
Pathway
csci00470
D-Amino acid metabolism
csci00550
Peptidoglycan biosynthesis
csci01100
Metabolic pathways
csci01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HDCHBGLK_01424 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HDCHBGLK_01424 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HDCHBGLK_01424 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csci01011
]
HDCHBGLK_01424 (ddl)
Enzymes [BR:
csci01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HDCHBGLK_01424 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
csci01011
]
Precursor biosynthesis
Amino acid ligase
HDCHBGLK_01424 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
GARS_A
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
QBF74028
UniProt:
B0NI26
LinkDB
All DBs
Position
complement(1405632..1406702)
Genome browser
AA seq
356 aa
AA seq
DB search
MKIIVLAGGLSPERDVSLISGAGICRTLREKGHKAYLLDVFFGLPYDPDKLEEVFDLPGG
GLEIAEGIKTTTPDLEALRASRPDQSDCYLGPNVIDLCRIADITFMGLHGSVGENGKLQA
TFDILGIKYTGPNSFGCALSMDKLVAKQIFKRSGVPTPRGTSLNRNTKDTPLEKLGYYLP
LVIKPCSGGSSIGVYIVHTEEEYREAIRCSFDVNHEDEVVIEPYIKGREYACSIIAGKAL
PLIEIIPKDGIFNYENKYQDGGAQELCPPVSLDDKTQAKIQRAGEKAFRVLHMDVYARAD
FIVDETDGKFYCLEMNGLPGMTPASLIPKSARAIGVDYGDLCELIIEESMKTRYQD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattattgttttagcaggaggactcagccctgaacgcgacgtgtcgctcatatca
ggcgccggtatttgcagaactctgagagaaaaagggcacaaggcatatctgctggatgtg
ttcttcggattaccttatgatcccgataaactggaagaggtattcgacctgcctggcggc
gggcttgagatcgcagagggcatcaagactaccacgcctgaccttgaagcgctgagggct
tcgcgcccggaccagtccgactgttaccttggcccgaatgttatcgacctatgccgtatt
gctgacataacatttatggggcttcacggctctgttggagaaaatgggaaactccaggca
actttcgatattcttggaatcaagtatacaggtcccaattcctttggttgtgccctgtcc
atggataaactggttgccaagcagatcttcaagcgttccggcgtgcctacgccaagaggc
acttccctgaaccgtaacaccaaggatactccccttgagaagctgggctactacctgccg
cttgtcataaagccatgttccggcggttccagcatcggagtatatattgttcatacagag
gaggaatatcgggaagccatccgctgctcctttgatgtaaatcacgaagacgaagtcgtc
atcgagccttatatcaaaggacgtgagtatgcctgcagcatcatcgcaggaaaggccctt
ccgctgatcgagatcattccaaaagacggaatcttcaattacgagaataagtatcaggac
ggcggcgctcaggaactctgtccgccggtatccctggatgataagactcaggcaaagatc
cagcgtgcgggcgagaaggcttttcgggtgctgcacatggatgtctatgcccgcgccgac
ttcattgtcgatgagacggatggaaagttctactgtctggaaatgaacggcctgccaggc
atgactccggccagtttgattcccaaatcagccagagccatcggagtggattatggcgac
ctgtgcgagttaattattgaagaatccatgaaaacacgctaccaagactag
DBGET
integrated database retrieval system
