Clostridium scindens: HDCHBGLK_03606
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Entry
HDCHBGLK_03606 CDS
T06591
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
csci
Clostridium scindens
Pathway
csci00521
Streptomycin biosynthesis
csci00523
Polyketide sugar unit biosynthesis
csci00541
O-Antigen nucleotide sugar biosynthesis
csci01100
Metabolic pathways
csci01110
Biosynthesis of secondary metabolites
csci01250
Biosynthesis of nucleotide sugars
Module
csci_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HDCHBGLK_03606 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HDCHBGLK_03606 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HDCHBGLK_03606 (rfbC)
Enzymes [BR:
csci01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HDCHBGLK_03606 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QBF76189
UniProt:
B0N9Q0
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All DBs
Position
complement(3531591..3532199)
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AA seq
202 aa
AA seq
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MGQIKVEKNVGGIQGLCVIEPAVHGDSRGYFMETYNQRDMEEAGLTMNFVQDNQSCSTKG
VLRGLHFQKEFPQGKLVRAIKGSVFDVAVDLRSNSETYGKWFGIELTEENKKQFYIPEGF
AHGFLVLSEIAEFCYKCTDFYHPGDEGGLAWNDPEIGIKWPQLVGEYQGSASAEGYHLED
GTALNLSDKDQLWVGVKDTFHF
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggacagataaaagttgagaagaatgtaggcggaattcaaggactttgcgtcatcgag
cctgctgttcacggggattccagaggatattttatggagacctataatcagagggacatg
gaagaggcaggacttaccatgaattttgtccaggataaccagtcctgctccacgaaaggg
gtccttcgcgggctgcacttccagaaggagtttccccaggggaaactggtaagggcgata
aaaggttcggtattcgatgtcgcggttgacctgcgaagcaatagcgagacttatggaaaa
tggttcggcatcgaactgacagaagagaataaaaagcagttctatataccagagggcttt
gcccatggattcctggtattaagcgagatcgcagaattctgctataagtgtacggatttc
taccatccgggagatgaaggcggacttgcgtggaacgatcctgagattggaatcaagtgg
ccgcagttagtaggcgaatatcagggaagtgcttccgcagaaggataccatctggaggat
ggcacggctttgaacttaagcgataaggaccagctttgggtaggagtgaaagatacgttt
catttctaa
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