Clostridium scindens: HDCHBGLK_03644
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Entry
HDCHBGLK_03644 CDS
T06591
Symbol
cwlC_2
Name
(GenBank) Sporulation-specific N-acetylmuramoyl-L-alanine amidase
Organism
csci
Clostridium scindens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBS_Bsp-like
Amidase_3
Glucosaminidase
PIN_10
Big_13
Motif
Other DBs
NCBI-ProteinID:
QBF76227
UniProt:
A0A494WRC8
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All DBs
Position
complement(3570835..3576132)
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AA seq
1765 aa
AA seq
DB search
MGRKLKNRLAYILIIVMLCSTMSLENVNASDYDSLNSTEGNNESNTIIENQQEADNEQTD
NSSVQQKVENEQYNASNEEADNVTEEIPEQDSQNIEIQTNDETQVLINYVSVDKPFLETP
NEQNVVVSFGNGNENISKVRLVCKKNDGSDLELNLTRQEKELYLFTIPLEKKDSGTYELD
SFAYFINGIEQIIDLKAIGIEAKFGVNEFYPGYENGDINSNDIDVSVVDVDANKVIAAQT
DIEEALDATQEAIAESSGESVNDKSRNLKTSRTAVKEKVVVLDPGHGGSDGGAAANGLVE
KNLTLKIAQYCKQELEEYSGLKVYMTRNNDSDVGLSERVQMAKRWGADVFVSIHINSASA
GANGVEVWYPNSSYNANIHAQGKDLANEILKELVGLGLTNRGIKIRNSENGTKYPDGSLA
DYYSVIKDSKTNGFPGIIVEHAFISNPSDAAKLKQESFLKQLGIADAIGIANYFGLSKNP
EIRIVNKNDFSGTFKVKITGVGSSTNTTKVEVPVWCQTDGQDDLKWYTATLQNDGSYTVD
VAISNHNDQVGTYIADLYVTYRNGTMEQLGRTSAVMSKTSANISVEKNGTNPAQYQSKVV
FSNMPTGVKSVQFAVWSNEGGQNDLKWYMGKDVGNDTWLATIDLNNHKTYGNYSVHAYLE
MEDGYFFNFGNTSFEVQKANVGELKVKDYNQNEGSFRVIIRLNNTDVGINKVDVPIWCSS
NQSDIKWYTAIKQADGTYSVDVNIANHKYNSGEYNIHAYLTDAFGNKSFGQATTFAVIAP
KSEVTAKDAAGTETNYELKATNLGLYGDVRKVEFAVWSLKGGQDDLAWYQASRDSSGAYR
ATVPISRHRTAGEYEADAYITLGNGGLKYVGKASFKVTEPGISRVEVSEKDVDGGTFTVS
LAKPESPSGVNRLQVAVWGAANGQNDLKWYDAAKRPDGSYEVAVSIANHGFETGTYNVHT
YLTGGNGISLCANTTSTEIEAPKSEVTAKDAAGTETNYELKATNLGLYGDVRKVEFAVWS
LKGGQDDLAWYQASRDSSGAYRATVPISRHRTAGEYEADAYITLGNGGLKYVGKASFKVT
EPGISKVEVSEKDVDGGTFTVSLAKPESPSGVNRLQVAVWGAANGQNDLKWYDAAKRPDG
SYEVAVSIANHGFETGTYNVHTYLTGGNGISLCANTTSTEIEAPKSEVTAKDAAGTETNY
ELKATNLGLYGDVRKVEFAVWSLKGGQDDLAWYQASRDSSGAYRATVPISRHRTAGEYEA
DAYITLGNGGLKYVGKASFKVTEPGISKVEVSEKDVDGGTFTVSLAKPESPSGVNRLQVA
VWGAANGQNDLKWYDAAKRPDGSYEVAVSIANHGFETGTYNVHTYLTGGNGISLCANTTS
TEIEAPKSEVTATDAAGTETNYELKATNLGLYGDVRKVEFAVWSLKGGQDDLVWYQASRD
SSGAYRATVPISRHRTTGEYEGDAYITLSNGTLKYVGTAKFEITIPSLNLYVANYDASLG
SFDVILNNIVSPSGINKIEVPVWCSSNQSDIKWYKAVKQNDGTYKITVDPMYHNLHSGIY
QIHAYITTGNGIMTLAGTTTQLVKAPELYTIMGTTTTTVDQMMKYYKSSGVNYPGNELGK
GGAPTLESFCKLYLEEANAEGVRAEVAFAQTMLETGWLKYGGIVKIEQFNFAGIGALDGN
STGNCATFPDVRTGIRAQIQHLKAYGSSGALTNSCVDPRFHLVKRNCAPYVQWLGQKENP
QGNGWATSERYGYNIMSGIQKLKSL
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaagttaaaaaatagacttgcgtatatacttataatagttatgctttgctca
acaatgtcgttggagaatgttaatgcttcggattatgattctttaaatagtacagaaggc
aataacgagtcaaatacaataattgaaaatcaacaagaggcagataatgaacaaactgac
aattcaagcgtacaacaaaaagtggaaaatgaacaatataatgcttctaacgaagaggca
gataatgtaacagaagagataccagaacaagatagtcaaaatattgaaatacagacaaat
gatgaaacacaagtacttataaattatgtgagtgttgataagccttttctagaaacaccg
aatgagcagaatgtcgttgtttcttttggaaatgggaatgagaatatatcaaaggtaaga
ttagtttgtaagaaaaatgatggcagcgatttagaactaaatttaacaaggcaagaaaaa
gaattgtatctatttacaatacctttagaaaaaaaagattctggcacatacgaactagat
agttttgcttattttataaatggaatagaacaaataattgatttaaaagcaattggtatt
gaggccaaatttggagtaaatgaattctatcctggatatgaaaatggggatataaattca
aatgatatagatgtttcggttgtagatgtagatgctaataaagtaattgcagctcagact
gatattgaagaggcattagatgcaacgcaagaggctattgcagagagtagtggtgagtcg
gttaatgataagtcaaggaatttgaagacttcaagaactgcagtaaaagagaaagtggtt
gtattagatcctggccatggaggaagtgatggcggagctgcagccaacgggttagtagaa
aagaatcttacattaaaaatagcacaatattgtaaacaagaattagaagagtatagtgga
ctaaaagtatatatgacaagaaataatgattcagatgttggattatctgaaagagttcag
atggcaaagcggtggggagctgatgtgtttgtaagtattcacattaattcggcaagtgca
ggcgctaatggagtagaggtttggtatcctaatagtagttataacgctaatattcatgct
caagggaaagatttagcaaacgagattttaaaagaattagtgggattaggactaactaat
cgaggaataaagataagaaattctgaaaacggcacaaagtatccagatgggtctttagca
gattattatagtgttattaaggatagtaaaacaaatggatttcccggtattattgttgaa
catgcttttatttctaatccgagtgatgccgcaaaattgaaacaagaaagttttttaaaa
caattaggtattgcagatgcaataggaattgctaattattttggtttatccaagaatccg
gagataaggatagttaataagaatgatttttctggtacttttaaagtaaagataacaggg
gtgggttcatctactaatacaacaaaagtagaggtaccggtgtggtgtcaaacggatgga
caagatgatttaaaatggtatacggctactttacaaaatgatgggagctatacagttgat
gtagcgataagtaatcataatgatcaagtaggaacttatattgcggatctttacgttaca
tatagaaatgggacaatggaacaattaggaagaactagtgcggtgatgagtaaaaccagt
gctaacatttctgttgaaaaaaacggaactaatccggcccaatatcaatctaaagttgtt
ttttctaatatgcctacgggagtcaaatccgttcaatttgcagtttggagtaatgaaggt
ggacaaaatgatttaaaatggtatatgggaaaagatgtagggaatgacacatggctggct
acgattgatttaaataaccataagacctatggcaactattctgtgcatgcttatttagaa
atggaagatggctacttttttaattttggtaacacatcgtttgaggtacaaaaagccaat
gttggggagttaaaagttaaagattataatcaaaatgagggaagttttagagtaataatt
agactaaataatacagatgtggggataaataaggttgatgttcctatatggtgttcgagt
aatcaaagcgatattaagtggtatacagcaataaaacaggcggatggaacatatagcgtt
gatgttaatatagcgaatcataaatataatagtggtgagtataatatacatgcgtattta
acggatgcatttggaaataaaagtttcgggcaagcaaccacatttgctgtaatagcgccg
aaatcggaggtcacagcgaaggatgcggcaggaacggagacgaattacgagctgaaggcg
acgaacctgggcctttacggggacgtgaggaaggtggagtttgccgtgtggagcctgaag
ggaggccaggatgatctggcgtggtaccaggcgagcagggactcgtccggggcatacagg
gcgaccgtgccgatcagcaggcatagaacggcaggggagtacgaggcggacgcatacata
acccttggaaatgggggattgaagtacgtgggcaaggcatctttcaaggtgacggagcca
ggcatctcaagggtagaggtgtcagaaaaggatgtggacggaggcaccttcaccgtgagt
ctggccaagccggaatcgccatcgggagtgaataggctgcaggtggcagtctggggagcg
gcgaacgggcagaacgacctgaaatggtatgatgctgcaaagaggcctgatggaagttat
gaggtggctgttagcatagcgaatcatggatttgagactggcacctacaatgtgcatacc
tatttgacaggcgggaatggcatcagtctgtgcgccaatacgacatcgacggagatagag
gcgccgaaatcagaggtcacagcgaaggatgcggcaggaacggagacgaattacgagctg
aaggcgacgaacctgggtctttacggggacgtgaggaaggtggagtttgccgtgtggagc
ctgaagggaggccaggatgatctggcgtggtaccaggcgagcagggactcgtccggggca
tacagggcgaccgtgccgatcagcaggcatagaacggcaggggagtacgaggcggacgca
tacataacccttggaaatgggggattgaagtatgtgggcaaggcatctttcaaggtgacg
gagccaggcatctcaaaggtagaggtgtcagaaaaggatgtggacggaggcaccttcacc
gtgagtctggccaagccggaatcgccatcgggagtgaataggctgcaggtggcagtctgg
ggagcggcgaacgggcagaacgacctgaaatggtatgatgctgcaaagaggcctgatgga
agttatgaggtggctgttagcatagcgaatcatggatttgagactggcacctacaatgtg
catacctatttgacaggcgggaatggcatcagtctgtgcgccaatacgacatcgacggag
atagaggcgccgaaatcagaggtcacagcgaaggatgcggcaggaacggagacgaattac
gagctgaaggcgacgaacctgggtctttacggggacgtgaggaaggtggagtttgccgtg
tggagcctgaagggaggccaggatgatctggcgtggtaccaggcgagcagggactcgtcc
ggggcatacagggcgaccgtgccgatcagcaggcatagaacggcaggggagtacgaggcg
gacgcatacataacccttggaaatgggggattgaagtatgtgggcaaggcatctttcaag
gtgacggagccaggcatctcaaaggtagaggtgtcagaaaaggatgtggacggaggcacc
ttcaccgtgagtctggccaagccggaatcgccatcgggagtgaataggctgcaggtggca
gtctggggagcggcgaacgggcagaacgacctgaaatggtatgatgctgcaaagaggcct
gatggaagttatgaggtggctgttagcatagcgaatcatggatttgagactggcacctac
aatgtgcatacctatttgacaggcgggaatggcatcagtctgtgcgccaatacgacatcg
acggagatagaggcgccgaaatcggaggtcacagcgacggatgcggcaggaacggagacg
aattacgagttaaaggcgacgaacctgggtctttacggggacgtgaggaaggtggagttt
gccgtgtggagcctgaagggaggccaggatgatctggtgtggtaccaggcgagcagggac
tcgtccggggcatacagggcgaccgtgccgatcagcaggcatagaacaacaggggagtat
gaaggagatgcttacataactttatcaaatggtacattgaagtatgtaggaacagcaaaa
tttgagattacaattccatcattgaatttgtatgttgctaactatgatgcttccctaggt
agttttgatgttatattgaataatatagtttcgccttctggaataaataaaattgaagtt
ccggtttggtgtagtagtaaccagagcgatattaaatggtataaagcagtaaagcaaaat
gatggtacatataagattactgtagatcctatgtaccataacttgcattcaggaatatac
caaatacatgcgtatattactactggtaatggaattatgacattggcggggacaacgaca
caacttgttaaagcccctgagttatataccatcatgggaacaacaacaacaacagtggac
caaatgatgaaatactataaatcgagtggtgtaaattatcctggaaacgaattaggaaag
ggaggagcacctacactggagtcgttttgcaaattgtatcttgaagaggcaaatgccgaa
ggagtgagggcagaggttgcatttgcgcaaactatgctagaaacgggttggctaaaatat
ggtggaattgtaaaaattgaacaatttaattttgcaggcattggtgccttggatggtaat
tctactggaaattgtgctacatttccagatgtacgaacgggaattagagcacaaatacaa
catttgaaagcatatggctcttcaggggcactaacaaattcttgtgttgatcctagattt
catctcgtaaagcgaaactgtgctccatacgtacagtggttggggcagaaagaaaatcct
caggggaatggatgggccacatcagaacgttatggatataatataatgagtggaattcaa
aaattaaaaagtttataa
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