Centruroides sculpturatus (bark scorpion): 111620356
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Entry
111620356 CDS
T06064
Name
(RefSeq) DNA ligase 4-like isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cscu
Centruroides sculpturatus (bark scorpion)
Pathway
cscu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cscu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111620356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cscu03400
]
111620356
Enzymes [BR:
cscu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111620356
DNA repair and recombination proteins [BR:
cscu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111620356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
DNA_ligase_A_C
DNA_ligase_IV
RNA_ligase
LIG3_BRCT
PTCB-BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
111620356
NCBI-ProteinID:
XP_023218045
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
METVASKVPFADLCCVCERISNKQGKQKKMDVLNSFIRQWRDFHNKLHKTDTTDSFYPAM
RLLLPHLERERAAYGIKEFMLAKLYIEILCLSKDSDDAQKLLNYRFSRNTKTEAGDFANV
AYHVLSLRCPEKGTLSIEEVNNCLDSIATNNALKNKDEMKKSILRLLRNTSAREQKWLIR
MIMKDLKMGISENTVFAAYHPDAKDLFDVTSSLSKVCSMLKNPNIRLNEIEISLFNPFRP
MLAEYAPPKQIEKLMNNQAFHIETKYDGERIQLHKEGNKYMYFSRNCIDFTDYYGSTSFK
GSFTPFIDRAFSSKVKNCILDGEIVGYNTKLNCIGSKGENFDVKNLHPGDIYQQCIIIFD
ILFYNDKVLTNYPLSERLQYLENLFTPIEGRIQCSPVKHASTEKEVVDALNEAIDNREEG
IMIKDMSSVYYPNSRKRGWVKVKPEYVNNLTDELDLLIIGGYFGEGRRGGLISHFLLGVC
ANDKNDENPVFYSFTKVGSGYSYKELCDLLTKLNTNWNIYDKKNPPSNIILAPGHKEKPD
VWIKPENSAVLQVKAAEITQSDQFKTGCSLRFPRVEKIRYDKSWNQCLTLSELENLRKEG
GGKLAGRYCTITTDQNYEISPKKRKVILTSVKPTVAPHFQPADISDIKVKSHMFEEKEFC
VINGPPSHSKHTLEKLIAEYGGNITQNPGMNTFCVIVDKVTLKAKNIIAKKQYNVVKVTW
LLKCIDQNSFIPWKPYDLLSSSYSTSERFSEDFDKYGDSYTNNITEFELKEIFQQISEEE
CKEQCSNEEIAEKELKYFPNESLHGLFRIFRIYIDDKAILGEENTKIKSHSLGITELQLR
LYGATIISKVDENTTHVITYSGDSSRYKMLRQMNRTRQKMFHLVTEDWVRECIKNKRLLN
ERHYQPNL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagtagcgtcgaaagtgccctttgcagacttgtgttgcgtctgtgaaagaatt
tcgaataaacaagggaaacaaaagaaaatggatgttttgaacagttttattcggcagtgg
agagattttcataataaattacataaaacagatacaacagattccttttaccctgctatg
cgtcttctgttaccacatttagaaagagaaagagcagcatatgggattaaagagtttatg
ttggccaaattatatattgagattctttgcttaagtaaagacagtgacgatgcacagaaa
ttacttaattatcgtttttcaagaaatactaaaactgaagcgggtgactttgcaaatgta
gcatatcatgtgttaagtttacgttgccctgaaaaaggaaccctatccattgaagaagta
aataattgtttagatagtattgcaacaaataatgctttgaagaataaagatgaaatgaag
aaaagtattttgcgtttattgcgaaatacttcagccagagaacagaaatggttaataaga
atgattatgaaagatttaaaaatgggaattagtgaaaatacagtttttgctgcttatcat
ccagatgccaaagatttatttgatgtaaccagcagcttatctaaagtatgctcaatgctg
aagaatccaaatattaggttaaatgagattgagatctctctctttaatccttttcgtcca
atgttagctgaatatgctcctccaaaacagatagaaaaattaatgaataatcaggccttt
catattgaaactaaatatgatggagagagaattcagctgcataaagaaggaaataaatat
atgtatttttctagaaactgtattgattttactgattattatggatcaacatctttcaaa
ggatcatttacacctttcatagatagagcttttagtagtaaagtgaaaaattgtattttg
gatggagaaattgttggatataacacaaagttgaattgtattggatctaaaggtgaaaat
tttgatgtaaagaaccttcatcctggagatatatatcagcaatgtatcattatttttgac
atcttattttataatgataaagttctaacaaactatccattaagtgaacggcttcaatat
ttggaaaacttatttacaccaatagaaggacgaattcaatgcagtccagtaaaacatgct
tctacagaaaaagaagtagttgatgctctaaatgaagcaattgataatcgtgaggaagga
attatgattaaagatatgtcatcagtatactatccaaatagtaggaaaagaggatgggtt
aaagttaaaccagaatatgttaataatcttacggatgaattagatctactgattatagga
ggctattttggtgaaggaagaagaggtggcttgatatcacattttttattaggggtttgt
gcaaatgataaaaatgatgaaaatcctgttttttattcttttacaaaagttggatcaggt
tattcatataaagaattgtgtgatctattaactaaacttaatactaattggaatatatat
gacaagaaaaatcctccaagtaatattattttagcacctggtcataaagagaaaccagat
gtttggatcaagccagaaaattctgcagttcttcaagtaaaagctgcagagattacacaa
agtgatcaattcaaaactggatgttctctcaggtttcctagagttgaaaaaataagatat
gataaatcatggaatcaatgtcttacactttcagaattggaaaatttgagaaaggaaggt
ggtggtaaactggcaggtagatattgtacaattactacagatcagaattatgaaatatca
ccaaagaagagaaaagttattttgacatctgtaaaacctactgttgctcctcatttccaa
ccagctgatatttctgatattaaagtgaaatcacacatgtttgaagagaaagaattctgt
gtaatcaatggcccaccttctcactctaaacacactttagaaaagttaattgctgaatat
ggaggaaatattactcaaaatccaggaatgaatacattctgtgtaattgttgacaaagtt
acattaaaagctaagaacatcattgcaaaaaaacagtataatgtagttaaagtgacttgg
cttctaaaatgcattgatcaaaattctttcattccttggaaaccatatgatttactgtca
tcatcttattctacatcagagagattttctgaagattttgataaatatggtgatagttac
acaaataatataacagaatttgaactaaaagaaatattccagcaaatatcagaagaggaa
tgtaaagagcaatgtagtaatgaagagattgctgaaaaagaattgaaatattttccaaat
gaatctctgcatggattatttagaattttcaggatctatatagatgataaagcgatttta
ggagaagaaaatacaaaaataaaaagtcacagcttaggcataacagaattacagttaaga
ctctatggagcaacaatcattagtaaagttgatgagaataccactcacgtaattacttac
tcaggtgattcttcaagatacaaaatgctgagacagatgaatcgtacaagacagaaaatg
tttcaccttgttaccgaagattgggtgagagaatgcattaaaaataaaaggttgttaaat
gagagacattatcagccaaatttataa
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