Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_1305
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Entry
Clst_1305 CDS
T02527
Symbol
priA
Name
(GenBank) PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
csd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clst_1305 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csd03400
]
Clst_1305 (priA)
Enzymes [BR:
csd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clst_1305 (priA)
DNA repair and recombination proteins [BR:
csd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clst_1305 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PIF1
Bac_DNA_binding
ADDB_N
ATPase_2
zinc-ribbons_6
AAA_16
Nuf2
AAA_19
zf-Di19
RuvB_C
Motif
Other DBs
NCBI-ProteinID:
AGI39366
UniProt:
L7VNJ4
LinkDB
All DBs
Position
complement(1462692..1465124)
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AA seq
810 aa
AA seq
DB search
MYVSVVIQNSTREFDKFYDYIVPDNMKDCIRPGVRVIVPFGKGNRLCEAFVMAVKETSEF
SGLKEISQIIDETPVLSDELIELSKYMRKRYVCTYDMAIRCMLPTGLGLLFREDVILMSA
DRVDLDRDEQEIIKVLSDNNGKISVEDLTQIVNRPVRKILNQLIEKNVVRIKSHVQMKAR
AKTEKNACPAMDEEEFWELVENNNVKNLNYIRIMEILYEEGSISVAELNALGFSQNTLNN
MKKKGYIAFYDAEVERNPFEYDDAPETLPLPPTPSQKKALDIIYEAMETGGFQEILLHGV
TGSGKTEVYMQAIAKTIEKGKNAILLVPEIGLTPQTVRRFKGRFGNQIALLHSRLSIGER
FDQWRRIKNGEARVVIGARSAVFAPLDNIGIIVIDEEHETSYKSDRTPKYDARGIATFRC
RYNNALLIYGSATPSIENYYRARTGKIKLVEMNERTNNLPLPEIITVDMRKEPDMGSKNG
ISTVLTRELIKNKEAGEQSIIFINRRGYSNFVQCRNCGYIVLCPYCSVSLTYHQAEKKLV
CHYCSFVTAKPSVCPECKSNNIDLHGIGTQKVEEQIPQIRSDISVIRMDMDTTTGKRGHE
KILDTFRNNKIDVLVGTQMIAKGHDFPDVTLVGILSADSLLGSGDYKATERTFQLITQAA
GRAGRAGRHGRVVLQTYNPDNFSIQAAIKQDYKEFYRQEIALRKMLKLPPFYQLGLVQVS
SKKSEAAMEIIKKIHSDIINNMNLNEGMFVSDPAPSPLAKLRNQYRWRIVLKHPRIKNMT
NILEWIYDKYNNSRKKEWTVSVDINPYSMI
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgtgtcggttgtgatacaaaacagcacaagggaatttgacaaattttatgattat
atcgtcccggacaatatgaaagactgtatcagaccgggagttcgtgttattgttccgttc
gggaaagggaacaggctgtgtgaagcttttgtaatggctgtaaaggaaacaagcgaattt
tcaggtttaaaggaaatttcccagattattgacgaaactcccgttttgtcagatgaactt
atagaattaagcaaatatatgagaaaaaggtatgtatgcacctatgatatggctataaga
tgcatgcttcccaccggacttgggctgttattccgggaagatgttatacttatgtcagct
gaccgggtagaccttgacagggatgaacaggaaattattaaagtattgtctgacaacaac
ggaaaaatatcggtggaagatcttacgcaaattgtcaacagacctgtaagaaaaattctt
aatcagcttatagaaaaaaatgttgtaagaataaaaagccatgtccaaatgaaagccagg
gccaaaactgaaaaaaacgcatgtcctgcgatggatgaggaagaattctgggaattggta
gaaaataacaacgttaaaaatctgaattatatacgtatcatggaaatactttacgaagaa
ggaagcatatccgtggccgaacttaacgctctgggtttttcccagaacacacttaataac
atgaaaaaaaagggatatattgccttttatgacgctgaagttgaacggaatccgtttgaa
tatgacgacgctcctgaaacactccccttgccgcccacaccatcccagaaaaaagccctc
gacattatttacgaagccatggaaacagggggatttcaggagattctgctccacggcgta
acaggcagtggaaaaactgaagtttacatgcaggccatagccaagaccattgaaaaggga
aaaaacgctattttattagtgcctgaaatcgggcttactcctcagaccgtacgccgcttc
aaaggaaggttcggaaatcagattgcactgctccacagccgtctttcaataggcgagcgt
tttgatcagtggcggagaattaaaaacggggaagccagagtggttatcggagcgcgttct
gctgtttttgcgcctttggacaatattggaattatcgttatagacgaggaacatgaaaca
tcctataaatccgacagaactcccaaatatgatgcaagaggcatagccacattcagatgc
agatacaacaatgcccttctcatctacggttcagcaacaccgtcgatagaaaattattac
agagccagaaccggaaaaataaaacttgttgaaatgaatgaaagaacgaacaatctgccg
cttcccgaaattattactgtggacatgaggaaggaacctgacatgggctcaaagaacgga
ataagtactgttcttacccgtgaacttataaaaaacaaggaagcaggcgagcagtccata
atttttattaacagaaggggatattcaaatttcgtacaatgcagaaactgcgggtatata
gtattatgcccttactgcagtgtttcgcttacctaccatcaggcggaaaagaaactggta
tgccattactgcagttttgtaacggcaaaaccatcggtttgtccggaatgcaaaagtaat
aacattgatcttcatggtatcgggactcaaaaagtggaggagcagatccctcaaattcgt
tccgacatatcggtaatccgtatggatatggataccaccaccggtaaacgcggtcacgaa
aaaatccttgataccttcagaaacaacaaaattgacgtactggtgggaacgcagatgata
gccaaggggcatgattttcctgatgttacactggtaggcatactttcggcggacagtctc
ctcggcagcggagattataaagcgaccgaaagaacattccaactcataacacaggcagcg
ggaagagccgggcgggcaggcaggcacggcagagtcgtccttcaaacgtataatcccgac
aatttcagcatccaggctgcaataaagcaggattataaagaattctacaggcaggagatc
gcacttcgcaaaatgctgaaacttccacctttttaccagctgggattggttcaggtttca
tcgaaaaaaagcgaagcagctatggaaattataaaaaaaatccattcagatataataaat
aacatgaacctgaatgaagggatgtttgtttccgatcctgccccgtcaccactggcaaaa
ctcaggaatcagtaccggtggcgcatcgttctgaaacatccgaggattaaaaacatgaca
aatattcttgaatggatctacgataaatataacaattcacggaaaaaagaatggaccgtt
tcggtggatattaatccgtatagtatgatataa
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