Cryptotermes secundus (drywood termite): 111862298
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Entry
111862298 CDS
T07421
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03022
Basal transcription factors
csec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111862298
09124 Replication and repair
03420 Nucleotide excision repair
111862298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csec03021
]
111862298
03400 DNA repair and recombination proteins [BR:
csec03400
]
111862298
Transcription machinery [BR:
csec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111862298
DNA repair and recombination proteins [BR:
csec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111862298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
111862298
NCBI-ProteinID:
XP_023703338
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MAEASKGIKTTLQSKNLQCKNLHDYLTTLPTEILDRLYNHPTTCLAVYREHNEVAQVLSG
LRVWQEAAIPGGLPGWIMNSAFKRNMKVALLGGGKPWSMSSQLETDSKPRDIPYLDGYAM
ERWECVLHYMVGSQQQEGISADAVRILLHAGLMKRDEEDGSPVITREGFQFLLLDTPSQV
WYFILQYLDTVESRGLDLVECLTFLFQLSFSTMGKDYSTEGMSDGLLVFLQHLREFGLVY
QRKRKAGRFYPTRLALNIASGQNKSQVDMNREGYIVVETNYRVYAYTDSNLQVALLGLFC
ELMYRFPNLAVGILTRESVRQALKSGITAEQIVGFLRLHAHRRMLAVGPPVLPPTIVDQI
KLWENERNRFTFSEGILYCQFLSQADFEVLRDHAQELGVLTWQNPQRRTMVVTRTSHEEV
KRFWKRYSKGGG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcaagcaaaggaattaaaacaactctccagtcaaagaacttacagtgtaaa
aacttgcatgattacttgacaactcttccaactgaaattttggatagactgtataaccac
ccaacaacttgcttagcagtgtacagggaacacaatgaagttgcacaagtgctcagtggt
ctgcgtgtatggcaggaggcagctatacctggtggacttccaggatggattatgaactct
gccttcaaaaggaatatgaaggttgcgctcttgggtggaggaaagccatggagcatgtca
tcacagctagaaactgacagcaaaccacgggacattccttacttggatggctatgccatg
gagcgatgggagtgtgtgctgcattacatggtggggtcacagcagcaggaggggatatct
gctgatgctgtccgtatccttctgcatgcaggcctgatgaagcgtgatgaagaagatggg
agcccagtgatcacgcgagaagggtttcaatttctgctgctggatacaccatcacaggtg
tggtacttcatccttcagtacctggacactgtggaatctcgtggcttggacctggtggag
tgccttacattcctgttccaactcagtttcagcacgatgggcaaggattatagcacagaa
ggaatgagtgacggacttctggtattcttgcaacatcttagagaatttggacttgtctat
caacgcaagagaaaggctggccgcttttatccaacaaggttagcccttaacattgcatca
gggcagaacaaatcacaggtggacatgaacagagaaggttacattgtggtagagacaaac
tacagggtgtatgcatacacagattccaacctacaggtggctctcttaggcctgttttgt
gaactcatgtacaggtttccaaaccttgctgtgggaatattgactcgagagtcagtgcgc
caggccctgaagagtggtatcaccgcagaacaaattgtgggctttcttcgtttacatgca
catcgtcgcatgttggctgtaggtcctccagttcttccaccaacaattgtagaccaaatc
aaactctgggaaaatgaacgcaaccgtttcactttctccgaaggaattttatattgccag
tttctttctcaagccgattttgaagtactgagagaccatgctcaagaattaggtgtactg
acatggcagaaccctcagcgcaggaccatggtagtaacacgtacaagtcatgaagaagtc
aaaagattctggaagcgatattccaaaggaggaggatga
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