Cryptotermes secundus (drywood termite): 111866139
Help
Entry
111866139 CDS
T07421
Name
(RefSeq) uncharacterized protein LOC111866139 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111866139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csec03021
]
111866139
03019 Messenger RNA biogenesis [BR:
csec03019
]
111866139
Transcription machinery [BR:
csec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111866139
Messenger RNA biogenesis [BR:
csec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111866139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFIA_Pcf11
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
111866139
NCBI-ProteinID:
XP_023710561
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MNSWTVTVTVPEAAGAPAVTPGVGSRYPSLASRQLQSNAVPENNMVQPHEDVKKPLVEAA
NQDVDLRQLPGSPSRKRSSTEIGEQPLPKKTKAEVFDELFRNEDVDLQQLPPNAPVVMEN
VPPSQPPPPVISQSSPIPTSASSQDSSANPTSSLKQPSPERESEESEVCMDECKSISEDD
GKENIERELKSRGWAKYKEKKPDTCKSALGPMGCSGRDELDLQKSRSSALGSSSQLRERD
MIYGNPRDRGLSNFHRSSGKFDKLGQPLLYHKLPDDTGERRRSLSTAVEEDMNHHLFDDA
SDISVNMIMQEVEEQLKNGTISFSHYNTVLKQVIQLNEVQKLRDAQRRDQQESKENWEPS
RRRHAWETSHLSPIIADDDRQGGSSIDARFGDIDERLPVPHKHKNLTPSLSSSSELSMPG
RFQPGPSQWNDAGRPHMRSGHWDHAPNPWIGSAHSTNSVPLTQGHLGTHVRMLNPGPSQG
QGIPFHQTSGPEFQPVDSFGGVNRWRPQFQSCTPCEGDVERSNTRFNGRSDNRFRGPAPS
LLKQQQARGNDEVPPADPMILKLIAQDRMRTINVDGVPRELRFYGDTAVVMLAWDDPREI
GFQGGARTVTFDERESILCSLNDTYREFIIDGSMHRIRLGAPTRELYVDGKWYECFFGGP
PVTIEIDGKMHVVRLEGPPPKVKIGLLKRTDLVAGKINLIINAKTMVPVFLDAKPQRFDI
ENKPHVLHFVKALSTVLINGQPIKVEFGGVPKPIIVHGKKHFIRFTMLPRGIRPGYVSIV
NMEGSRLPSPPRPKIENNGTLTFGREDFRHPSSRFSEGYEPVLPVVGATGSLGRRGLRKQ
FGANRDRDLPHETEHATNSPGQFHGDNAVKGPVPIQQQKHRPRVAGAQLHGAGLSNIPSL
PAEINVAELFQRLVAAGIVPQAGKSDADSKEEEEAKSIKAVDFGQPETLKLRQPGAVAIL
FSGIQCSSCGIRFPPGQTVKYRKHLDWHFWQNRRDKDNAHKAQSREWYYDASDWIRFEEI
EDTEERAQSWFETQQAVEAEEKEIQKVPSVCAGENPEDAFCAVCHDKFEQFFHDDEEEWH
LRSALRVDGKTYHPLCYDDYKVSIFIIMLHLLLKTLFYCL
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctggacagttacagtaacggttcctgaagcagctggtgctcctgccgtcacc
cctggtgtaggatcgaggtatccttcgcttgcttctcggcaactgcaatctaatgcagtt
ccagaaaataatatggtacagccacatgaggatgtcaaaaaaccacttgtagaagctgca
aatcaggatgtggatttgcgtcaacttcctgggtcacctagtaggaaacgttcatccacg
gaaataggagagcagccactgccaaagaaaacaaaagcagaagtttttgatgagttgttt
agaaatgaagatgttgatcttcaacagttacctcccaatgcaccagttgtcatggagaat
gtacctccatcacagcccccacctccagtaatatctcagtcttcacctattccaacatca
gcatcgtctcaggatagttcagcgaaccctacttcatctttaaagcagccatcacctgag
agagaaagtgaggagtctgaagtctgcatggatgaatgcaaatccattagtgaagacgat
ggtaaagaaaacattgaacgtgaactaaagtctcgaggttgggcaaaatataaggagaag
aaaccagatacatgtaaatctgcactggggcccatgggttgttctggtcgtgacgaactt
gatctacaaaaatcacgtagttcggctctagggtccagttcgcaactgagagaaagagac
atgatctatggaaatcccagggacagaggattgtcaaattttcacagaagtagtggaaag
tttgataaacttggacaaccacttctttatcacaagttgccagatgatactggagaaagg
cgtcggtccctcagcactgcagttgaagaggatatgaaccatcatttatttgatgatgct
agtgatatcagtgttaatatgatcatgcaggaagttgaagagcagctcaaaaatgggaca
atatcgttttctcattataatacagtgctgaaacaggtaattcagttaaatgaagttcag
aagttaagagatgcacaaagacgagatcagcaggaaagtaaagagaactgggaaccgagc
agaagaagacatgcatgggaaaccagtcatttatcaccaatcattgcagatgatgataga
caaggtggttcctctatagatgccaggtttggagacatcgatgagagattgccagtacct
cataagcataaaaatcttacaccctcattgtcatcgtcttctgagctctccatgccaggg
agatttcagcctggaccttcacaatggaatgatgctggacgtcctcacatgaggtctggt
cattgggaccatgcccctaatccatggataggcagtgcacatagtacaaactcagtaccc
ttaactcaaggtcaccttggcactcatgtccgtatgcttaatccaggcccaagtcaagga
caaggcatcccctttcaccaaacttcaggaccagaatttcaaccagttgacagttttggt
ggagttaaccggtggagaccacagtttcagagttgtacaccttgtgaaggtgatgtagag
aggtctaatacacgttttaatggccgttcggataacagatttcggggacctgctccatct
ttgctgaagcagcagcaggcacgtggaaatgatgaagtgccaccagcagatcctatgatt
ctcaagctcatagcacaggatagaatgaggactattaatgtagatggtgtgcctagggaa
ctacgtttctacggtgacaccgctgtagtgatgctggcgtgggatgacccacgagaaatt
ggtttccagggaggtgcacgaacagtcacatttgatgagagagagtctatactctgttcc
ttgaatgatacatacagagagtttatcattgatggaagtatgcacaggatacgacttggt
gcaccaactcgtgaactctatgttgatggcaagtggtatgaatgtttctttggtggtcct
ccagttacgattgaaattgatgggaagatgcatgttgtgaggttggagggtccacctcct
aaagttaaaattggcctgttgaagcggacagatctggttgctggcaagatcaatttaatc
attaatgccaaaactatggtaccagtgttcttggatgccaaaccacaaagatttgacatt
gagaataaaccccacgtacttcattttgtcaaagctttgtcgactgtgttaattaatgga
cagcctatcaaagttgaatttggtggagttccaaaacccattattgttcatggcaagaag
cactttatacgtttcaccatgttacctcgtggtatcaggcctggatatgtcagcattgtt
aatatggaaggtagtcgtttgccatcacctcctcggccgaagattgaaaacaatggaacc
ttaacctttggtagagaagatttccgtcatccatccagcagattctcagaaggatatgag
cctgtattacctgttgtgggagctactggcagtttaggcagacgaggtctgagaaaacag
tttggtgcaaacagggaccgagatttacctcatgagactgaacatgcaacaaactcacca
ggacaattccatggagataatgcagtgaaaggacctgttcctattcaacaacaaaaacat
agaccacgtgttgcaggggcacaattacatggtgctgggctaagcaacatcccgtccctt
cctgctgaaattaatgtagctgagctatttcagaggctggtggcagcgggaattgttcca
caagccggaaaatctgatgcagatagtaaggaggaggaagaagcaaagtctataaaggcc
gtggacttcgggcagcctgaaacattgaaattacgtcagcctggtgcagtggctatcctg
ttctctggtattcagtgtagttcctgcgggatacgtttccctccaggacagactgtgaag
tacaggaaacatttagattggcatttctggcaaaacaggcgtgacaaggacaatgctcac
aaagctcagagtagagagtggtattatgatgcttcagattggatccggtttgaagaaatt
gaagacactgaggaaagagcacaaagctggtttgaaacccagcaggctgtggaagctgaa
gaaaaagagatacaaaaagttcccagtgtttgcgctggagaaaatcctgaggacgcattt
tgtgctgtatgccatgataaatttgaacaattttttcacgatgacgaagaagagtggcac
ttacgttcagcattgagggtagatggaaaaacatatcaccctctttgctatgatgattac
aaggttagcatattcattataatgttacacttacttttaaagactttattctattgcctt
taa
DBGET
integrated database retrieval system
