Cynoglossus semilaevis (tongue sole): 103382894
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Entry
103382894 CDS
T04866
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csem01001
]
103382894
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103382894
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103382894
Protein kinases [BR:
csem01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
103382894
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103382894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4
DUF3583
DUF5054
PHD_2
Motif
Other DBs
NCBI-GeneID:
103382894
NCBI-ProteinID:
XP_008314089
UniProt:
A0A3P8VXT2
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All DBs
Position
8:complement(25823012..25831566)
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AA seq
1079 aa
AA seq
DB search
MDNSAENIDNDDIVIIVENEAESLPAEEERLKQQGTFGLMDTCPVCKLSFQNREPKLLPC
LHSFCKKCLPAPFRTADPRRDSPAIVDNGKPLVGAIRCPVCRQECWEIDVLDNYFVKDSA
EVPSSTVEKSSQLCMSCDDNTEVTGYCVECVEYLCLTCIEAHQRVKFTRDHTIRQKTEMS
PEIPGFSAQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLQKHKDHNYQFLEDAYRNHKQY
LENMTQQLQEKRKAVEDVSCCINSGLQQVDENRKAVTNEIKKSICNLIMEINRKGKILVN
QLEGLTKEHEVSLKKQQDDVNSLGQHLDHVISFTKWATASHSGTALLYCKRLILYQIHFL
MRAGCSPSVIPQSSVRFQCRSGFWATNVDLGSLMVERGPGRMPIPNNQSGPRAEPTAASL
SLSAQQRQSTLAQLQMQVDKLSQQSHRQQPPSNYWSWYQNIRPPGPLGPPPPTRPINGDS
SPSQGPTSVMQLGRRFGSSANRSPTSSMLQNTAFSSAQSLRELIHQSSLHPKPTDVSQGA
TRYPHPLSVGAAAHGSLHQRLAPESSFLKRTEASGSVPSITISVPKMSSAPSMTLTAADK
TAPFKHVSVQGRQNSSAAKPSSSDRSSGSSSWKQTPDPPPAKRRRRFSPGPIIVIKDEPE
DEDEVHFVQSSLPDSSTGAPSKPRQQHHHQQQQQQQQSFVPDPAPNPESSAVKEPCPQPS
ATAPSEKRAEPEDDPNEDWCAVCQNGGELLCCDKCPKVFHLSCHIPSLNESPSGEWFCSL
CRNLVSPEMTYGCDSKDENTSDGLSPLDRRKCEWLLLRLLCNDFSTDFQGPASQSETKRY
KELIQKPMDLSIVRRRLASKSEEDCYTSPEGLVADVRLIFFNCSKYFKATSEVGSAGLYL
EDYFEEQLKVVYPDKVFPGGREEQMIPPLEDEIEDEEEEMMQEGEAHRGEDEPQNIEGKG
IPSLEEDLDPEQETAATAEEEKLETVEKANDEEEKEKMMSEPAADGEVATMEEVQQEETT
PAEAVKSSQTDGGETRQEGAPCSLKLETPELHEDCKTVEPPENHEEESAPVDTASQEEG
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggataatagtgctgaaaatatagacaacgacgacattgtcatcattgtggaaaatgaa
gctgaaagtttgcctgccgaggaggagaggctcaagcagcagggcacattcggactaatg
gatacctgtcccgtctgcaagttgagcttccagaacagggaacccaaactgctgccgtgt
ctccactccttctgtaagaagtgtcttccggcgcccttcaggactgctgacccgaggaga
gactcaccagctatagtggacaacggcaaaccgctagtgggtgccattcgatgtcctgta
tgcaggcaagaatgctgggaaatagacgtgctggataattattttgtcaaggactctgct
gaagtgccaagcagcacagtagagaaaagcagtcagctgtgtatgagctgtgatgacaac
acagaagtgacaggttactgcgtggagtgcgtggagtacctgtgcttgacatgcatcgag
gcgcaccagagggtaaaattcacaagggatcacaccatccgacaaaagacagagatgtct
ccagaaattccagggttctccgcacagaagccagttttttgcgacatccacaaacaggag
ccactgaagctgttttgtgaaacgtgtgaccgactcacgtgtcgagactgtcagctgcag
aagcacaaagatcataactatcagtttttggaggatgcgtacaggaaccacaagcaatat
ctggagaacatgacacagcagttgcaagagaaaagaaaagctgttgaggatgtttcctgc
tgtatcaactctggacttcagcaggttgatgaaaaccggaaagctgttaccaacgaaata
aagaaatccatttgtaacttaatcatggagatcaacaggaaaggaaagattttggtgaac
cagctggagggtctcaccaaagaacatgaggtcagtttgaagaagcagcaggacgacgtc
aactctctgggtcagcacctcgaccatgtgatcagcttcacaaagtgggcaacggctagc
catagtgggacggctctcctgtactgcaagagactgattctttaccaaattcatttcctg
atgagagcaggctgcagtccctcagtcatcccacagagttctgttcgctttcagtgtcgc
tccggattctgggccacaaatgtcgatcttggttcactgatggtggaaaggggcccagga
cgaatgcccatccccaacaatcagtccggaccgagagcagagcctacagctgccagcctg
tccctctcagctcagcagcgacagagtacactggcccagctccaaatgcaggttgacaag
ctttcccaacagtcccacagacaacagcccccatccaactactggtcctggtaccaaaac
atcagacctccgggacccttgggcccaccaccacccaccaggccaatcaacggagattcc
tccccgtcccagggaccgacgagtgtgatgcaactaggacgtaggtttgggagttccgcc
aacagaagtcctacatcatccatgcttcagaacacggccttttcctctgctcagtctctg
agagaactgatccatcagtccagcctccatcccaaacccaccgatgtgtcgcagggggcc
acacgatatccgcatccgctgtctgtcggagcggctgcacacggttcactgcaccagagg
ctcgcaccagaatcctccttcctgaaaaggactgaagccagcggctctgttccgtccatc
accatctctgtccccaaaatgagctcagcgccaagtatgacgttaacggcagctgacaaa
acagccccgtttaaacacgtatcagtccaaggaaggcaaaactcttctgcagccaaaccc
tcatcttcagacagaagctcaggatcgtcttcgtggaagcagacgcccgatcctccgcct
gccaagcgacgaaggaggttttctccaggtccaataattgtcatcaaggacgaaccagag
gatgaggatgaagttcattttgttcagtccagtttgcctgacagcagcacaggtgctccc
tcaaagcctcggcagcaacatcatcaccaacagcagcagcaacaacagcagtcatttgtc
ccagatccagcccctaacccagagtccagtgctgttaaagaaccgtgtcctcagccctcg
gcaacagcaccgtcggagaagcgggcggagccggaggacgatcccaacgaggactggtgt
gctgtttgtcagaacggaggagagctgctctgttgtgacaagtgtcccaaagtttttcat
ctctcctgtcacatcccctccctcaacgagtctcccagtggtgagtggttctgttcactc
tgccgaaacctggtctcccctgagatgacgtacggctgtgacagtaaggacgagaacacc
tcagacggattgtcgcctcttgatagaaggaagtgtgagtggttgttgctgcgtctgctc
tgcaacgacttcagcactgacttccaagggccggcgtctcaatcggagacaaaaaggtac
aaagagcttatccagaaaccgatggacttgtccatcgtgaggaggagactggcgtcaaaa
tccgaggaagactgttacacttctccagagggtttggttgcagatgtccggctgatattt
ttcaactgttccaagtacttcaaggcgacctcagaagtggggagtgcaggcctctacttg
gaggactattttgaggagcaactgaaggtcgtctaccctgacaaggtgttcccaggaggg
agggaagaacagatgatccctcctctagaggatgaaatagaagacgaagaggaagagatg
atgcaggaaggtgaggcacacagaggagaggatgaaccccaaaacattgagggaaaggga
atcccctctctagaagaggatctggatcccgaacaggaaacggcagcgacagcagaggaa
gaaaagctcgaaacagtggaaaaagcaaacgacgaggaggaaaaggagaagatgatgagt
gaaccggctgctgacggagaagtggcaaccatggaggaggtgcagcaggaggagacaacc
cctgcagaggcagtgaagagctctcagactgatggtggggaaacgagacaagaaggagct
ccctgctccttaaaactggagacccctgagctccatgaagactgtaaaactgttgaacca
cctgaaaaccacgaggaggagtcggctcctgtagacacagccagtcaggaagaaggatag
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