KEGG   Cynoglossus semilaevis (tongue sole): 103384345
Entry
103384345         CDS       T04866                                 
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csem03036]
    103384345 (dicer1)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    103384345 (dicer1)
   microRNA pathway
    RISC loading complex
     103384345 (dicer1)
SSDB
Motif
Pfam: Dicer_platform Dicer_dsRBD Dicer_PBD Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer PAZ Helicase_C DEAD ResIII CCDC22_CC dsrm
Other DBs
NCBI-GeneID: 103384345
NCBI-ProteinID: XP_008316059
LinkDB
Position
1:20270529..20288622
AA seq 1913 aa
MAGLQLVTPATSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLVKELSYQIRGNYLGHAKRTVFLVNTASTAVQQAAAIRTHSDLEVGEYTDLGKA
TEWTDQHWGQEIINNQVLVMTCHVFLYILKKKILLLSKINLVVFDDCHLAITNHPYCEIM
KLFEGCSCSPRILGLTASILNGKCDPSELEQKILNLERILKSNAETATDLVVLDRYASQP
REVVLDCGVYTDKSGLSSQLQLELDEALHFLNDCNISVTREDRDPTFISKQILSDCQAVL
QVLGPWCADKAAGIMVRELQKYIKHEQEELGRKFLLFTDTTLRKVHALCEEHFSPASLDL
KFVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEVESKDRP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPR
NKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADTERTQGFKEDLTTYKAIEKILRNKCSKSLEVSEFEVEQVMDDDNI
LPPYVLRSEDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTMEMLDGFFQSTLYLP
INSPLRIPIKGPKMTCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEEMDLHD
EEETSVPGRPGSTKRRQCYAKAIPECLRDSYAVLGQTYYLYVIGMVLTTPLPDELNFRRR
KLYPPEDTTRCFGILTAKPIPRIPYFPVYTRSGEVTISIELQKSGFTLTDTQLDLITRLH
QYIFSHILRLEKPALEFKPTLADSAYYVLPLNVVGDSNTLDMDFKFMENIEKSEARTGIP
TTHYTKQNPFSFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAE
YYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAKTATEAGVGTQSLPSDFR
YSNLDFGWKRSIDNKTFISCQEFCNEDDEGHCEQQEATAHDSSNLTQSCIDHSPVLEHGH
HVDPEPEDPHCTRHFTNGTTPVAHSDTSSQKDEHLHHQDNCQFSQPNEPVPQSSKSMQTT
TSVSARPSDILTKPSPSPTQPSDKCTPESTSLNTSKATSVCSQVAMGPSTATAPSSDLPS
GNKCRVLAENTSKSLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTY
PDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKGGSD
KQDSAANEELLTNGQCGTTYADDDDDDDDDEEEAEEMDEDSEVMLKAEPKEEVNIEDDLE
YYKEHIRFIDSMLLGSGAFAKKISLNAFPPSSTPGSGSSPAMDSPYDWKTPKKPHHPTTG
PYPSDTSFSGLSLEEFDYSSWDAMCYLDPSKAGEEDDFVVGFWNPSEENCGVELGKQSIS
YDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPSEKGALTQMLMRN
CQNMAVDLCYGWLKIPPRCMLSHPDAERTLNHLISGFENFERKINYTFQNKAYLLQAFTH
ASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLA
VKYDYHKYFKAISPELFRVIDDFVQFQLEKDEMQGMDSELRRSEEDEEKEEDIEVPKAMG
DIFESLAGAIYMDSMMSLETVWQVYFPMMRPLIDKFSANVPRSPVRELLEMEPETAKFSP
AERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVQNN
NT seq 5742 nt   +upstreamnt  +downstreamnt
atggcaggtttacagctggtcacccctgctacttcacccatggggcctttctttggtctg
ccatggcagcaggaggccatccatgataacatttacacacctaggaaatatcaggtagaa
cttcttgaagcagctcttgaacataatactattgtctgcttgaacactggctcagggaag
acctttatcgcagtactcctagtaaaagagctctcctaccaaattcgaggaaattaccta
ggacatgcaaagaggactgtttttctggtaaacacagcttcaactgcagtgcagcaagca
gctgctattaggacccactctgacctggaggtgggagaatacacagatttggggaaagca
acagaatggactgaccaacactggggtcaagagattattaacaatcaggtgctggtcatg
acctgccatgtattcctgtacattttgaagaaaaaaatcttgcttttgtccaaaattaac
ctggtggtgtttgatgattgtcacctagccatcacaaaccatccttactgtgagataatg
aagctgtttgaaggctgctcgtgctctcctcgaatcctgggactcacggcgtctattcta
aatgggaaatgtgatccttcggaattggagcagaagatcctgaatctggagagaattctc
aaaagcaatgctgaaactgccacagaccttgtggttctggacaggtatgcctctcagcca
agagaagtcgtgctggattgtggcgtctacacagacaaaagtggactttcttcccaactg
cagctggagctggacgaagctcttcactttctgaacgactgcaacatctctgtcaccaga
gaagacagagatcctacgttcatctccaagcagatcctgagtgactgccaggctgtgctt
caagtcctggggccctggtgtgccgacaaggcagcaggcattatggtccgggagcttcag
aaatatataaaacatgaacaggaggaactcggtcgcaagttcctgctcttcacagacaca
actctgcgcaaagtgcatgctctctgtgaggagcacttctctcccgcctcactggacctc
aagtttgtcaccccgaaggttctgcggctgttggagatcctccatgaatacaagcccttt
gaacgacagcagtttgagagcgtcgagtggtacaacaaccgcaaccaggacaattacgtg
tcctggagtgactcggaggatgaagacgaagatgaagaggtggagtccaaagataggcct
gaagccaactttccctcaccgttcaccaatattttgtgtgggatcattttcgtggagagg
cgttacacggccgttgtcctcaatcgtcttattaaggaagctgggaagcaggatccagag
ttggcttacatcagcagcaacttcatcactggccacagcattggcaaaaaccagcctcgg
aacaaacagatggaggcggagtttaggaaacaagaggaggttctacgcaagtttcgagcc
catgaaaccaacctccttattgccaccagcattgtggaggaaggtgtggatatcccaaag
tgtaacctggtcgtgcggtttgacctgcccactgagtacaggtcctatgtccagtccaaa
ggcagagctcgtgcaccagtctccaactacataatgctggccgacacggagaggacccaa
ggctttaaagaagacctcacaacgtataaggccatagagaagattctaaggaacaaatgt
tcaaaatcactggaggtgagtgagtttgaggtggaacaggtgatggacgatgacaacatt
ctcccaccctacgtgcttcgttctgaggatggcagcccccgggtcactatcaacacagcc
attggacacatcaacagatactgtgctcggctgcccagcgacccattcacccacttggca
cccaaatgtagaactatggagatgctcgatggattcttccagtctacgctctacttaccc
atcaactcgcccctgcggattcctattaagggtcccaaaatgacctgtgccaggctcgca
gagaaagctgttgctcttttgtgctgcgaaaaactccacaaaataggtgagttggatgat
cacctgatgccggtgggaaaggagactgtcaaatatgaggaggagatggacctccacgat
gaggaagagacaagtgtccctggccgccctggttctaccaagaggagacaatgctatgct
aaagctattcctgagtgtctgcgggacagttatgctgttcttggccagacctactacctt
tatgtgattgggatggttcttaccactccactaccagatgaactcaacttccgcaggagg
aagctctacccaccagaggacaccacccggtgctttggcatcctgactgcgaaacccata
cctcgtatcccttatttcccagtgtacactcgctcgggtgaggtgacgatctccattgag
ctgcagaagtctggcttcaccctcactgatacccagcttgacctcatcacacgactgcac
caatacatcttttcccacattctgcgcctggagaaacctgcattggagttcaagcccaca
ctagctgactcggcttactatgttctacctctgaatgttgttggggactccaacaccctt
gatatggactttaagttcatggaaaacattgagaagtccgaggcccgaactggcattccc
accactcattacacaaagcagaaccccttcagcttcaagttagaggactaccaggatgct
gtgatcattccaaggtatcgtaatttcgaccagcctcaccgcttctatgtggcggatgtg
tacacagatctgacgccactcagcaagtttccatcaccagagtacgagacgtttgcagag
tactacaaaaccaagtacaatctggatttgtccaacctgaaccagcccctcttggacgta
gaccacacctcctcgagactcaatctgttgacccctcgtcacctgaaccagaagggcaaa
gctctaccactgagcagtgcagagaagaggaaggccaagtgggaaagtctgcagaacaaa
cagattcttgttccagagctgtgtgccattcaccccattcctgcctccctgtggagaaag
gcagtgtgtcttcccagcatcctctaccgcctccactgcctcctgaccgctgaggagctg
agggctaagacggcaacggaagcaggagtgggaactcagtcccttccatctgacttcagg
tattcaaacctggactttggctggaagagatcgattgacaacaaaacgttcatctcctgc
caagagttttgtaacgaggatgatgagggtcactgtgaacaacaagaggctacagcccat
gactccagtaacctcacgcaatcatgtattgaccactctcctgtgcttgagcacggacac
catgttgaccctgagcctgaagaccctcactgcaccaggcattttactaacggcactacc
cctgtagcacactctgacaccagcagtcagaaagacgagcaccttcatcaccaagacaat
tgccaattttcccagcccaacgagcctgtgccgcagagctccaaatcaatgcaaaccact
acctcagtttctgcacggccctcggacatcttgacgaagcccagccccagccccacacag
cctagtgacaaatgtacacctgaaagcacctcactcaacacaagtaaagctacctcagtc
tgcagccaggttgctatgggtcccagcacagccacagcaccttcatctgacctaccctct
ggcaacaagtgcagagtcctggcagaaaacacctccaaaagtctgggacccaaccccggc
ctcattctgcaggccttgactctttcgaatgcaagcgatggcttcaatttggagcggctg
gagatgcttggcgactccttccttaagcatgccataacgacatacctgttctgtacctac
cctgatgcccatgagggacgactcagctacatgcgcagcaaaaaggtgagcaactgtaac
ctatatcgccttgggaagaagaaaggccttcccagcaggatggtggtgtccatttttgat
cctccggtcaactggctccctcctggttatgtggtgaaccaggacaaaggtggctctgac
aaacaggactcggcggccaatgaagaacttctgaccaatgggcagtgtgggaccacctat
gctgacgacgacgatgatgatgatgatgatgaggaggaggctgaggagatggatgaagac
agtgaggttatgctcaaggctgagccaaaggaagaagtgaacattgaagatgatttggaa
tactacaaagaacacattaggttcattgatagcatgttgttgggatcgggtgcatttgcc
aagaagatctctctaaatgctttccctccctcctcgacaccgggctctggttcctcacct
gctatggattctccatacgattggaagacccccaaaaagcctcaccatcccaccacaggc
ccctacccctcagacacatccttcagcggactgtctttagaggagtttgactacagctca
tgggatgccatgtgctacctggaccccagcaaagctggagaagaggatgactttgtggtg
ggcttttggaacccgtcggaggaaaactgtggtgttgagctgggtaagcagtcaatctcg
tacgacctgcacacggagcagtgcatcgctgataaaagcatcgctgactgtgtggaagct
ctgctcggatgctatctcaccagctgtggagagagggccgcacagatgttcctctgctcc
cttggcctcaaggtgttaccatcggagaagggggctctaacacaaatgctgatgcggaac
tgtcagaatatggctgtagacctgtgctacggctggttaaagattccaccgcgttgcatg
ttgagccatccagatgccgagcgaaccctgaatcacctcatctctggctttgagaacttt
gaaagaaagatcaactacacctttcagaacaaggcatacctcctgcaagccttcacccac
gcttcctaccattacaacactatcactgattgttaccagcgtctggagttccttggtgat
gcaattctagactacctcataacaaagcacctttatgaagacccaaggcagcactctccc
ggcgtgttgaccgacctgcgctctgcgctcgtgaataacaccatctttgcatctctggct
gtaaagtatgattaccacaagtacttcaaggccatttcgcccgagcttttccgcgtcatt
gatgactttgtgcagtttcagctggaaaaggatgagatgcaaggcatggattcagagcta
agacgctctgaggaagacgaggagaaggaggaggacatcgaagtccccaaagccatgggt
gatatctttgagtcattagctggagccatttacatggacagcatgatgtcactggagacg
gtgtggcaagtttattttccgatgatgaggcctcttattgataaattctctgccaatgtg
ccgcgctctcctgtgagggagctccttgagatggagccagaaactgccaaattcagccct
gcagaaagaacgtatgatggaaaggtgcgagtgacagtggaggtcgttgggaaagggaag
ttcaaaggtgttggtcgcagctaccggattgccaagtcggcagcggcacggcgagctctg
cgcagccttaaagccaatcaacctcaggtccaaaacaattga

DBGET integrated database retrieval system