Cynoglossus semilaevis (tongue sole): 103387269
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Entry
103387269 CDS
T04866
Symbol
col19a1
Name
(RefSeq) collagen alpha-1(XIX) chain
KO
K24340
collagen type XIX alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103387269 (col19a1)
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103387269 (col19a1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103387269
NCBI-ProteinID:
XP_016893046
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Position
12:7417756..7511581
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AA seq
1107 aa
AA seq
DB search
MMCVLRWTAFLWTLNSIPGSVGMAVNEQADDSCPPLSVEDHRFSDALDRPLQITGFDLTE
KFLLRKGTIMEDLPSFRLGSSPLIKPTISIFPNGLSSEYSFVTIFRVRRTTKKDRWYLWQ
IFDQSGGSQVSVVVDGNKKVLELSFQGVLKNTLRYTFKSRDLHGLFDRQWHKLSISLQSN
MVSLYMDCKLIERRLTDEKDGIDPSGKTLITTRMEDGRPVDVEVRQILIYCDPYMAEMEN
CCELVQPKCEAKKTFNGTAPPPLVTQQLPQMLSQPVSHSNDRCHCPGEKGDVGLPGVVGL
PGEKGDKGDKGDSGEVGPTGNPGHKGEPGSEGQTGIDGEKGDVGKPGLPGLPANKEYVKG
DQGPRGDKGEKGLAGVPGEPGKEGKRGRRGKPGEPGPRGPSGLAGNTEGGGVKGEKGDSG
EPGEKGEAGQPGAEGESGMKGQKGDAGPPGPPGPVMTAHGLRQLSGTDDLKETQKGEKGD
QGERGQQGMQGFKGNPGLPGLKGDQGPEGKQGLSGPIGLPGLPGEPGSPGEPGVPGRDGL
KGEKGDSGGVMGPHGPPGPKGEPGEPGGGYMGDGMPLTRGSRGPKGERGVPGLPGDQGEK
GEPGESVLGPPGPMGAPGHPGVKGSRGLTGSSGPPGVPGKEGSPGRPGPPGPAGPPGEPT
ALPIVGDMGSLLKNACSLCQTKIPGLPGQKGEKGSPGGQGTEGGLGEKGDPGIRGPMGNP
GKEGPKGIKGERGFPGPTGDKGDEGPSGAPGLPGMIGRTGAPGIMGRPGPMGQHGAKGDK
GSEGPAGTPGLPGPPGVPYVEGNGMSSLYKLQSGGVFLGPPGAPGAPGPKGDEGAAGEPG
AMGLPGLEGLPGPKGDVGFPGPPGAAGPLGKPGTRGEPGIPGEPGERGPLGETGFPGPEG
PQGVAGRPGRDGTPGDEGSTGKPGDRGPKGERGDSGIPGERGVQGERGRSGDPGAVGPIG
PPGPKGDSGSPGQLDRGTLLGDPGFMEELKMIIQNEVLRVIEGRLLGAAALQKTPAGILA
PQVQGPPGPPGKDGLPGPQGVPGPPGPQGYRGQKGERGQIGLGLPGDPGPMGPPGPVGIP
SHGPPGSPGPRGPPGTCNPSDCLLPSL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgtgctgagatggactgctttcctctggactttaaattccattcctggctcc
gttggaatggcagtgaatgaacaagcagatgactcatgtccccctttgagtgtggaggac
cacagattttctgatgcattagatcgccctctgcaaatcacagggtttgatctcaccgaa
aagtttctacttcgaaaagggacaattatggaagacctgccttcatttagattgggaagc
agtccacttatcaagccaacaatatccatttttccaaatggactttcaagtgaatactcc
tttgtcaccatcttccgggtaaggaggacaacgaaaaaggaccgctggtatctttggcag
atttttgaccaatctggaggcagtcaggtgtctgtcgtggtggatggcaataagaaagtg
ttggagctttccttccagggtgtgctcaaaaacacgttgcgctacacgttcaagagccgt
gacctacatggcctttttgatcgccagtggcacaagctgagcatttctttacagagcaac
atggtgtcactttacatggactgcaagctcatagagaggaggctgaccgacgagaaggac
ggcattgaccccagtggaaaaacactgatcaccacacggatggaagatggtcgacctgta
gatgtggaggtcagacaaattctgatctactgtgacccctatatggctgagatggaaaac
tgctgtgagctcgtgcaaccaaagtgtgaagccaagaagacttttaatgggacggccccc
cctcccctggttacacagcagcttccacagatgctgtctcagccggtctcacactcaaat
gacagatgtcactgtccaggcgaaaagggagatgttggactcccaggtgtagttggactg
ccaggagaaaagggggacaaaggagacaagggggactcaggggaggtcggaccgacagga
aacccaggacataagggggaacctggatcggaagggcaaacaggaatcgatggggagaag
ggtgatgtgggtaaacctggccttcctggtttacctgctaataaagaatatgtcaaagga
gatcagggtcccagaggagacaaaggagaaaagggcttggctggggtgccaggagaacca
ggcaaggagggcaaaagggggcggagagggaaacccggagagcctggacccagaggacca
tctggcctagcaggaaacacagaaggtggaggtgtgaagggggagaagggggattcagga
gagccgggagaaaaaggagaagctggtcagccaggtgcagagggtgagagtgggatgaag
ggccagaaaggtgatgccggccctcctggtccaccaggtcctgtgatgacagcccacggc
ttgagacaactctctggaactgacgatctaaaggaaacccaaaaaggagaaaagggagat
cagggcgagcgaggacaacaaggaatgcaaggatttaagggaaacccaggtcttccaggc
ctgaagggagatcaaggcccagaggggaaacaaggcctgtctggacccatcggactccca
ggactcccaggagagccaggctcgccgggggagccaggggtgcctgggagagacggcctg
aaaggagaaaagggtgactctggtggagtgatggggcctcacggacctccaggtccaaag
ggtgagcctggagagccggggggcggatatatgggtgatgggatgcctttaaccagaggg
tctcgtggacctaagggtgagagaggagtaccaggcctgccaggagaccaaggtgaaaaa
ggcgagcccggagagagtgtcctcggccctcctggccccatgggagccccaggacacccc
ggagttaagggctcacgaggactcacaggttcttctggccctcctggggttccaggaaag
gagggctcccctggtagaccaggccccccaggccccgctgggcccccgggtgaaccaact
gctctgccaatcgtcggagacatgggttctttgttgaagaatgcctgcagtttgtgccaa
acgaagattcctggtctccctggacagaaaggggagaaggggtcccctggtggacagggg
acagagggcgggttgggagaaaagggagatccaggcatcagaggtccgatgggtaatcct
ggaaaagaaggccccaagggaataaaaggggagagaggcttcccaggccctacaggagat
aaaggtgacgaggggccctcaggagctccaggacttcctggtatgattggtcgtacaggg
gccccgggcataatgggccgacctggaccaatgggtcagcatggagcaaaaggagacaaa
ggaagtgaaggacccgcaggtacaccagggcttccagggcctccgggtgttccctatgtg
gagggcaatggcatgagcagcctgtacaagctgcagagcggtggagttttcctgggaccg
cctggagctcccggtgctcctggtcccaaaggagatgaaggagctgcaggggaaccagga
gccatgggattaccagggctggaaggactgcctggccctaaaggcgatgttggttttcct
ggtccaccaggggcagcaggtcctctaggaaagcccggaacacgtggagaacctggaatc
ccaggagagccgggtgaacgcggcccacttggagagacgggatttccggggcctgaggga
ccccagggtgttgctgggagacctggaagagatggaactcctggagacgagggatccaca
ggtaaaccaggggacagaggacccaaaggagaacgtggtgattcagggattcctggtgaa
agaggtgttcaaggtgaaagaggtcgctctggagaccctggtgcagtcgggcccatcggt
ccaccgggcccaaaaggtgattcaggctctccaggacagctggaccgtggaaccctcttg
ggagacccgggcttcatggaggaactgaagatgattatccaaaatgaagtactgagagtc
attgaagggaggcttctgggagccgcagcactacagaaaacacctgcaggcatcctagct
ccacaggttcaagggcctccaggaccacctggcaaagatggattaccaggcccacaagga
gtgcctggacctcctggtcctcaaggatacagaggtcagaagggagaacgcgggcagatc
ggtctagggttaccaggagatccaggacccatgggacccccaggtcctgtgggcatccct
tcccatggacctcctggctctccaggaccccggggacctcctggtacatgcaaccccagc
gactgtctcctgccatccttatga
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