Cynoglossus semilaevis (tongue sole): 103397810
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Entry
103397810 CDS
T04866
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103397810 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103397810 (smarca2)
03036 Chromosome and associated proteins [BR:
csem03036
]
103397810 (smarca2)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103397810 (smarca2)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103397810 (smarca2)
Chromatin remodeling factors
BAF complex
103397810 (smarca2)
PBAF complex
103397810 (smarca2)
GBAF(ncBAF) complex
103397810 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
103397810
NCBI-ProteinID:
XP_008334419
LinkDB
All DBs
Position
Z:complement(8425633..8467895)
Genome browser
AA seq
1584 aa
AA seq
DB search
MSNPSEFLGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGAVHSMMGPSPGPGTPSGPHGM
QGQVQSDYSQESMYPMHKPMESMNDKTMADPMHLGHMKGVGVRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPLSGGAGGGGPTPPHMPPSQPGPMMSMDPQGGMPSMSTMGQ
RGPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGRRSLPTMHQQQQPQQQQQQP
QQQQQPQQPTPSASPYNRPPGMAVAHMGGPQSSPCPPPAMQGHSQSTGPKPWSDSQGAEN
QANTQKHLTAATSGRPSPVPPQVPAVPAGPLPGTSVTPQPPGQQVSPMLQMQQKQNRVTP
IQKPQGLDPVRILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQR
QLRQDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQE
YLNSILQHAKDFKEYHRSVSGKIQKLTRAIANWHTNTEREQKKETERIEKERMRRLMAED
EEGYRKLIDQKKDKRLAYLLQQTDEYVANLTSLVYEHKAAQAAKEKKKKKKKKKKMDGDG
EGTSTFGPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAP
RSDSEESGSEFEEEEEEEAAKTETEEKKIIDPSGDVEPLNGTKEIIETAKQDVDDEYSVP
TGQTSSQSYYGVAHAVIERVEKQSSLLINGMLKHYQIQGLEWMVSLYNNNLNGILADEMG
LGKTIQTIALITYLMEYKRLNGPYVIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPALRR
GLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYV
APRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETI
LIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSE
KDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNSIISGPDLYRASGKFE
LLDRILPKLHATSHRVLLFCQMTTLMTIMEDYFGYRNFQYLRLDGTTKSEDRAALLKKFN
XXXXXYFLFHLRSDLTQRHASTVIHILLQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEK
ILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETLNQMI
ARNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEEEKM
FGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSYGRDEGS
SKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKELPEY
YELIRKPVDFKKIKDRVRNHKYRNVGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVF
KSARQKIAKDEESDDDSDEDDEDDDESEAEAKSVRVKIKLNKESRSHDRGKKRQSRGKAK
PVVSDDDSDEDLDDNDFSDKSDDE
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccctcagaatttttaggcggcatgtcccatcctggcccttcaccgggggct
gggctgtctccagggcccatcttaggccccagccctggaccagacccttcaccaggcgct
gttcacagcatgatgggacccagtccaggtcctggaacacccagcggaccccatggcatg
cagggccaagtgcaaagtgattactctcaggaaagcatgtatcccatgcataagcccatg
gagagcatgaatgacaagacgatggcagacccaatgcacttaggtcacatgaaaggtgtg
ggggtgagatctctgcatagtgggatggggcctccacaaagtcccatggaccaacacagt
caaggttatatgtctccacatccatctcccatgggtgttcatgagcacgcttctagtcca
ttgtcagggggtgcaggaggtgggggacccacgccgccacacatgccgccctcccagcca
ggtcctatgatgtccatggatccccagggaggtatgcccagtatgtccactatgggtcag
cggggcccatctgccttcagcccagtgcagctgcagcagctcagagctcagatcctggcc
tataagattctgggacgtggacaacccttgcctgaaaaccttcaactggctgttcaaggc
agaaggagccttcctaccatgcatcaacagcagcaaccacagcagcaacagcagcagcct
cagcagcaacagcagccacagcagccgaccccaagtgccagtccatacaacaggccacca
ggtatggcagtggcacatatgggtggaccacagtcaagtccctgcccacccccagctatg
caaggacacagtcaaagcacaggacctaagccttggtctgatagtcagggggcggaaaat
caggcaaacactcagaaacacctcactgctgccaccagtggacgtccgtctcctgtgcca
ccccaggtccctgctgttccagctgggcccctgccaggaacctcagtcacccctcagcct
cctgggcagcaggtgtcacccatgcttcagatgcagcagaagcagaaccgggtcacacca
attcagaagcctcaaggcttggatccagtgagaatccttcaggaaagagagtacaggttg
caggctcggattgcacatcgaatccaggaactggaaagtcttccagggtccttgcctcct
gacctgaggaccaaagccacagtggagctcaaggcactgcgtctgcttaatttccagcga
cagctcaggcaagatgtggtggcatgtatgaggcgagacacgaccctggaaactgctctc
aactccaaggcctacagacgcagcaaacgacagacactgagggaggcccgcatgactgaa
aagctagaaaagcagcagaagctcgagcaggagaagaagcgcagacagaaacatcaggaa
tacctcaacagtattcttcagcatgcaaaggactttaaggaatatcatcggtctgtgtct
ggaaagatccagaaactcaccagagccatcgccaactggcacaccaacacggagcgggag
cagaagaaggagacagagaggattgagaaggagaggatgaggaggctcatggcggaagat
gaagaaggctatcgaaaactcatcgaccaaaagaaagataagcgtctggcctacttgctg
cagcagactgatgaatatgtggccaatctcacctctttggtgtatgaacacaaagctgcc
caggctgccaaggagaagaagaagaagaagaagaagaagaagaagatggatggagatggt
gaaggcaccagcacctttggacctgatggagagcccatggatgagagtagccagatgagt
gagctgccagttaaagtgattcagactgagacggggaaagttttacagggaacagatgcg
cccaaatccagtcagctggaggcttggctggagatgaatcctgggtatgaggtcgctccc
cggtcagacagtgaggagagcggctcagagtttgaggaagaggaggaagaagaagcagcc
aaaacagaaacagaggagaagaagataattgaccccagtggagacgtagagcctctgaac
ggaacaaaggaaatcattgagactgccaagcaggacgtagatgatgaatacagcgtcccc
accggacagaccagctcccagtcctactacggtgtagcccacgctgtgattgagcgggtg
gagaagcagtcatcgctgctgatcaacggcatgctcaaacactaccagatccaaggactg
gagtggatggtgtccctgtacaataacaatcttaatggcatcctggctgatgagatgggc
ctgggtaaaaccattcagaccatcgctctgatcacctacctgatggagtacaagaggctc
aacggaccctatgtcatcatcgttcctctctcgaccttgtctaactgggtttacgaactg
gacaagtgggcgccctcaattgtgaaaattgcttacaagggcactcctgcattgcggcgt
gggcttgtgccacagcttcgcagtggaaagttcaacgtgttgctgaccacatatgaatat
atcatcaaagataagcacatactggccaagattcgttggaagtatatgattgtggatgaa
ggtcaccgtatgaagaaccaccattgcaagctgacccaggtgctgaacacccactacgtt
gctcctcgtcgtctcctcctcactggcactccgctgcagaacaagctgcctgagctgtgg
gccttgctcaacttcctcttgccgaccatttttaagagctgcagcacttttgagcagtgg
ttcaacgccccatttgccatgaccggagaaagggtggacctgaatgaagaagaaaccatt
ctgattattcggcgtttgcacaaggtgctccgtcccttcctgctgcgcagactgaagaaa
gaggtggagtctcagctgccggagaaggtggaatatgtcataaaatgtgacatgtctgcc
atacagaaggttttgtatcgccacatgcagaaaggcatccttctcactgacggctccgag
aaagacaagaagggcaaaggaggtgccaagaccctgatgaacaccatcatgcagctcaag
aagatctgcaaccatccatacatgttccaacatattgaggaatcttttgctgagcacctg
ggctttccaaacagcatcatcagtgggccagatctgtatcgagcctctgggaagtttgag
cttttagaccgcatcctaccaaagcttcacgccacgtcccacagagtgctgctcttctgc
cagatgactactctcatgacaatcatggaagactacttcggctaccgaaactttcagtat
ctacgtctggatggaaccactaagtctgaggatcgagcagcactcctgaagaaatttaat
nnnnnnnnnnnnntatattttctgtttcacctcagatctgatcttacacagcgtcatgct
tctactgtaattcatattctcttacaggaccttcaggcccaggatcgtgctcaccgtatc
ggtcagcagaacgaagtgcgtgtgcttcgtctttgcacggtcaacagtgtggaggagaaa
atcctggcggctgccaagtacaaattaaatgttgatcagaaggtcatccaggctggcatg
tttgaccagaagtcctccagccatgagcgccgtgctttcctgcaggctattttagagcat
gaggaacagaacgaggaggaggatgaggtgcctgatgatgaaactcttaaccagatgata
gcacgcaatgaagatgagtttgagctgtttatgcgcatggacatggacagacgtcgtgaa
gacgccaggaacccaaaacgcaagcctcgtctgatggaggaggatgagttaccttcctgg
atcatcaaagatgatgcagaggtggagaggctgacgtacgaagaggaggaagaaaagatg
ttcggccggggttcacgttgtcgtcgcgacgtggactacagtgacacgcttaccgaaaaa
cagtggctaagggcaattgaagatggaaaccttgaggaaatggaggaggagatacgcctg
aaaaagcgtaagcgtaagaggagacaggacaaagactcctacggcagggacgaaggaagc
agcaaagccaagaagcgccgtggacgtccaccggcggaaaagctctcccccaaccctccc
aaactcaccaagcagatgaacaccatcattgatacagtgatcaactacagagatgggtca
ggaagacaactaagtgaggtatttgtccaactgccctccaggaaggagctcccagaatat
tatgagctgatcagaaaacctgttgacttcaaaaaaatcaaggaccgtgtgagaaatcac
aagtacagaaatgtgggggatctggagaaggacgtgatgctgctctgtcacaacgcccag
actttcaacctggagggatcccagatatatgaagactccattgtccttcagtctgttttc
aagagcgccaggcaaaagatagcaaaggacgaagagagtgatgatgacagtgatgaagat
gatgaggatgatgatgaatcagaagccgaagccaagtctgtgcgagttaagattaagctg
aacaaagagtccagaagccacgacaggggcaaaaagaggcaaagtcgaggcaaggccaag
cctgtggtcagcgatgacgacagcgatgaagacctggatgacaatgatttttcagacaag
agtgatgatgagtga
DBGET
integrated database retrieval system
