Clostridium septicum: CP523_06565
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Entry
CP523_06565 CDS
T06069
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
csep
Clostridium septicum
Pathway
csep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CP523_06565
09124 Replication and repair
03420 Nucleotide excision repair
CP523_06565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csep03021
]
CP523_06565
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_06565
Enzymes [BR:
csep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CP523_06565
Transcription machinery [BR:
csep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CP523_06565
DNA repair and recombination proteins [BR:
csep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CP523_06565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PhoH
PDDEXK_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AYE34160
UniProt:
A0A9N7JLI5
LinkDB
All DBs
Position
complement(1499209..1501503)
Genome browser
AA seq
764 aa
AA seq
DB search
MEDKIVIRESVRGIIEYILRKGHLDDRYTGKSRALEGTLAHQKLQLSNEKIYSNYKKEVR
LEYTFNIEDALLKVEGRADGIIIEDNKVIIEEIKSTMKNLTFIDEDYNELHWAQAKFYSY
IYLMQNNLSKISIRLSYYNIETNEVKSFDKKFILEELIEFVDYIVNEYSRWIKIKGNLQL
ERDKSIYKLDFPFQFYRKGQRELAVNCYNTIKEKGVLYAQAPTGIGKTMSTIFPAVKALG
NGMGSRIIYLTAKTITRTVAEEAFNKLKGKGLNFRSITLTSKEKICFQEKVSCNPDECKY
AVNYFSKVNDIIYEMLSNENKFTRDVVERYARKYDICPFELSLDLSSWCDGVICDYNYAF
DPRVRLKRFFEDDIKNNIILVDEGHNLVDRAREMFSAELYKSRILEVSKLIKGTSPKFYK
ALSSVNKEFIKIRKQVQELEENSMYQKEEFRDLYKLLRIVLKEGDEYLITSIGTANYNEV
LDLYFDIRSFVSISELYSNEYVTIVELDKSEVKVKLFCVNPSKNLSMIVRQSYSTIIFSA
TLTPLTYYIDLLGGNEDSYRMKLPSPFDSEKFKTYAYPLNMRYSMREKNIDNVCRLIRDF
INKIQGNYMAFLPSYSYLNKVYNRYVELYGEEGTVCQGDTLSEEDREKFINNFREKNKII
AFCVVGGIFSEGIDLPGDMLIGSIVVGVGFPKISKEGDIIKDYYEENGFDYAYVYPGINK
VLQAAGRVIRTEEDEGSLLLIDDRYFTNKYRALLPSEWDVKKIN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaagataagatagtaattagggaatcggttagaggaataatagaatatatattaaga
aaaggacacttagatgatagatatacaggaaaaagtagagctttagaaggaacattagcc
catcaaaaattacagttaagtaatgaaaagatatattcaaattataaaaaggaagtaagg
ctagaatatacttttaatatagaagatgctttattaaaagtagaaggtagagcagatgga
ataataatagaagataataaagttataatagaagaaattaaatcaacaatgaaaaattta
acttttatagatgaagattataatgaattacattgggcacaagctaagttttattcatat
atatatttaatgcaaaataatttaagtaaaatatcaataaggcttagttattataatata
gagacaaatgaagttaagagttttgataagaaatttattttagaggagctaatagagttt
gtagattatattgtaaacgaatatagtagatggattaaaattaaaggtaaccttcaatta
gaacgagataaatctatttataagttagactttccatttcagttttatagaaaaggtcaa
agggaattagcggttaactgctataatactataaaagaaaaaggtgttctttatgcacaa
gcaccaactggaatagggaagactatgtcaacgatatttcctgctgtaaaagctctagga
aatgggatgggaagtaggataatatatttaacagcaaagacaattacaaggactgtagca
gaagaagcttttaataaattaaaaggcaagggtttaaactttagaagtataactttaact
tcaaaggagaaaatttgtttccaagaaaaagtatcatgtaatcctgatgaatgtaaatat
gcagttaattattttagcaaagtaaatgatattatatatgagatgctttcaaatgaaaat
aaatttacaagggatgtagtagaaaggtatgcaagaaaatacgatatttgtccttttgaa
ttatcgttagatttaagttcttggtgtgatggagtaatttgtgattataattatgccttt
gatccaagagtacgattaaaaagatttttcgaagatgatattaagaataatattatatta
gttgatgaaggtcataacttagttgatagagctagagaaatgtttagtgctgaattatat
aaaagtaggattttggaagtaagtaaattaataaagggtacttctcctaagttctataag
gctttgtcttctgtaaataaggaatttataaagataagaaagcaagtacaagagttagaa
gaaaatagtatgtatcaaaaagaagagtttagagatttatataaacttttaagaatagtt
ttaaaggaaggtgacgaatatctaattacatctataggtacagctaattataatgaagta
ttagatttatattttgatattagaagctttgtttctatttcagaactatattcaaatgag
tatgttacaatagttgaattagataagagtgaagttaaggtaaaattattttgtgtaaat
ccttctaaaaacttatctatgatagtaagacaaagctattctacaataatattttcagca
actttaacgccattaacttattatatagacttgcttggtggaaatgaagatagttataga
atgaagttaccatcaccttttgattctgaaaaatttaaaacttatgcatatccattaaat
atgagatatagtatgagagaaaagaatatagataatgtctgtagacttattagagatttt
attaataaaatacagggtaattatatggcttttttaccatcatactcatatttaaataaa
gtatataatagatatgtagagctttatggagaggaaggtacagtttgtcagggggatacc
ttatcggaagaagatagagagaaatttattaataactttagagaaaagaataaaataata
gcattttgtgttgtaggtggaatattttcagaaggaattgacttgccaggagatatgctt
ataggaagtatagtagttggtgtaggttttcctaaaatatctaaagaaggagatataata
aaggattactatgaagaaaacgggtttgattatgcctatgtttatccagggataaataag
gtgctccaagcagcaggtagagtaattagaacagaagaggatgaaggtagtcttttatta
atagatgataggtattttacaaataaatatagagctttattaccaagtgaatgggatgtt
aaaaagataaattag
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