Coccinella septempunctata (seven-spotted ladybird): 123313422
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Entry
123313422 CDS
T07873
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03022
Basal transcription factors
cset03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123313422
09124 Replication and repair
03420 Nucleotide excision repair
123313422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cset03021
]
123313422
03400 DNA repair and recombination proteins [BR:
cset03400
]
123313422
Transcription machinery [BR:
cset03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123313422
DNA repair and recombination proteins [BR:
cset03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123313422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
123313422
NCBI-ProteinID:
XP_044754233
LinkDB
All DBs
Position
5:complement(31500526..31502503)
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AA seq
397 aa
AA seq
DB search
MDDGDPKEYRWETGYEKTWEAIKEDDDGFLEASVADIIQRAKRKRQNTKGYGTKLGMMRH
FYIILDCSESMSSQDLKPTRLICTLKLLEGFMEEFFDQNPISQIGVIIMHNKRAEKIVDL
AGNAKKHIKTLKTLNKTSLVGEPSLQNGLEMAFKSLKLLPTHASREILIIMGSLTTCDPG
DINTTISALKTEGVRCSVIGLAAEVHICKQLAKETGGTYNVILDDCHFKDLLYQQIDPPP
AASGLESSLIKMGFPHQMSVEGTEEPLTMCMCHVDSIDEGSKLTTGGYYCPQCYSKYCEL
PVECRSCGLTLVSAPHLARSYHHLFPAANYQEIEYEKQSEICFACQKLFNESDKQIYKCP
NCQNFYCIDCDIFVHETLHTCPGCATNPSTFQITQTG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggatgatggagatcccaaggaataccgctgggaaaccggctacgaaaaaacatgggaa
gcaatcaaggaagacgatgatgggttccttgaagcttctgttgctgatataatccaaaga
gctaaaaggaaaagacaaaatacaaaaggatatggaactaagcttggaatgatgaggcac
ttctatattatattggattgttctgaatcaatgtctagtcaagacttaaaacctactcga
ctcatttgtacattaaagcttctggaaggtttcatggaagaattctttgatcaaaatcct
ataagtcagattggagttatcataatgcataacaagagggcagaaaaaattgttgacctt
gcaggtaatgcaaaaaaacatattaaaacattgaagacactgaataaaacatcattggtg
ggggaaccttcccttcagaatgggttggagatggctttcaaatcactgaaattactacct
actcacgcaagtagagaaatattgattattatgggaagtctcacaacgtgtgatccaggt
gatatcaatacaacaatcagtgccttgaaaacagagggagttagatgttctgttataggc
ttggcagctgaagtacatatctgtaaacaattagcaaaagaaacaggtggaacatataat
gttattttggatgactgtcattttaaagacttattgtatcagcagatagatcccccacca
gctgccagcgggctggaatctagtttgatcaaaatgggatttcctcatcaaatgtctgtt
gaaggaactgaagaaccattaactatgtgtatgtgtcacgttgatagcatagatgagggc
agcaaactaacaactggtggttattattgcccacaatgttacagtaaatattgtgaactt
ccagtagaatgtcgatcttgtggactaactttagtttctgctccgcatttagctagatct
tatcatcacttgttccctgcagcaaactatcaagaaattgagtatgagaaacaatcagaa
atttgttttgcatgccagaagctatttaatgaatcggataaacagatatacaagtgccca
aattgtcagaatttttactgcattgattgtgatatttttgtccatgagacgctccataca
tgtcctggatgtgccacaaatccttctacattccaaataacacaaacaggttaa
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