Coccinella septempunctata (seven-spotted ladybird): 123316448
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Entry
123316448 CDS
T07873
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123316448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123316448
Enzymes [BR:
cset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123316448
Spliceosome [BR:
cset03041
]
Complex A
U2 snRNP components
U2 related factors
123316448
Complex B
123316448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
DUF3928
Motif
Other DBs
NCBI-GeneID:
123316448
NCBI-ProteinID:
XP_044758445
LinkDB
All DBs
Position
7:complement(1384595..1390370)
Genome browser
AA seq
1014 aa
AA seq
DB search
MVRGRERSRSRSPERKRRRSRSRSKDRSKSNRYRRSRSRERERTDRRSRSRDRRSRSRER
DRRERERRSYSRERDRRRGDSRDRKRRRDKTRSRSPEKKPKADDSGLPFDPTNLDKEEEQ
KKLELEMQKRRERIERWRAERKKKEQEATKKEAQKVAVPQGTSKKWSLEDDSEDEDKADK
NDKEENEETKEKEEEEEKPETKPEVPEEDEVDPLDEYMKEVQAEVRSINRLHVKKPNKSD
PNTVKKGNLVIVTGIAKSKVDTKKGELVEQNQDGLEYSSEEEQEDLKDTAANIANKQRKD
LAKIDHNNIIYIPFRKNFYVEVPEISKMTQQEVDAYKEELEGIRVKGKGCPKPIKTWAQC
GVSTKELNILRKLGFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQ
PPLEETDGPISIIMTPTRELCMQIGKDIKKFTKSLNLHAVCVYGGTGISEQIAELKRGAE
IIVCTPGRMIDMLAANSGKVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV
MFSATFPRQMEALARRILQKPIEVQVGGRSVVCKDVEQNVVIIEEDQKFLKLLELLGLYQ
EHGSIIVFVDKQENADILLKELMKMAYNCLSLHGGIDQFDRDSTIIDFKSGKVKLLIATS
VAARGLDVKHLILVINYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITPEQSRYAGDIIRA
FELASVTVPEQLRNLWESYKTKQESEGKKVHTGGGFSGKGFKFDENEAAAVNEKKKFQKA
ALGLVDSDDEDLEHDIDQQIESMFATKRTVKEIKAPLGIVNPAMGGVSTAVDKLELAKRL
ASKINFTKTTPPDAKFATQEAAASILKGSSNTLSITAKTVAEQLAAKLNTKLNYQPKDDD
ERDAEDAEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTYVPTGKQ
PPEGERKLYLAIESTSDMAVAKAKSEITRLIKEELLKLQTSGHHTFNKARYKVI
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggttagaggtcgtgaaagaagtaggagtaggtctcccgaaagaaaacgaaggagatca
agatccagaagcaaagacagatcaaagtctaaccgatacagaagaagcagatctagggaa
agagaaagaacagatagaagaagtagaagtcgtgacagaagaagcagatcaagagaaagg
gatagacgtgaaagagaacgacgttcatacagccgagaaagagatcgtagaagaggtgac
agcagagatagaaagaggagaagggataaaactcgtagcagatcccccgaaaaaaaacct
aaagcagatgactctggtttaccgttcgatccaacaaatttggacaaagaagaagagcag
aaaaagttggaattggaaatgcagaaacgtagagaaagaatagaaagatggagggccgaa
aggaagaaaaaagaacaagaagcaacgaagaaagaggcacaaaaagtggcggtgcctcaa
ggtacctccaagaagtggtcgctcgaggacgattccgaagatgaagacaaagccgacaag
aatgataaggaagaaaatgaggaaactaaagagaaggaagaagaggaggaaaaaccagaa
acgaaaccagaagtccctgaagaagacgaagttgatccacttgacgaatatatgaaagag
gtccaggctgaggtgagaagcataaaccgcttgcatgtcaagaagccgaataaatcagac
cccaacactgtcaaaaaaggtaatctagtcatagttacgggtatagctaaatcgaaagta
gacacgaagaaaggtgaacttgtcgagcagaatcaagacggtctagaatactcgtccgaa
gaagaacaagaagatttgaaagataccgcagctaacatagctaacaaacaaaggaaggat
ctggctaaaatcgatcacaataatatcatctatattcccttcaggaaaaacttttatgtg
gaagttccggaaattagcaagatgactcagcaggaagtggatgcttacaaggaggaactt
gagggaatcagggtcaaaggaaagggatgtccgaaaccaataaaaacgtgggcccaatgc
ggggtttccacgaaagaactgaacatactgaggaaattaggattcgagaagcccactccg
atccaggcccaagcgatacctgcaataatgtcggggagagatctgatcggtatagcgaaa
acaggaagtggtaaaactttggcgttccttctccccatgttcaggcatatattggatcaa
ccgcccctggaggaaactgatggtccgatatccataatcatgacgcccaccagggagtta
tgcatgcagatcgggaaagatatcaaaaaattcacgaaaagtctgaatctgcacgccgtg
tgcgtctacggaggaaccggcatttcggagcagatcgctgagctcaaaaggggcgcggag
atcatcgtctgtacccccggtaggatgatcgatatgctggccgccaacagcggcaaagtg
accaatttacgaagggtcacatacatcgtcttggacgaggcggacaggatgttcgacatg
ggtttcgagccgcaagtgatgcggatcatagacaacgtgaggccggacagacagaccgtc
atgttcagcgccaccttcccgcgtcagatggaggctctggcccgcaggattctccagaaa
cccatcgaggtgcaggtgggcggtcggtcggtggtctgcaaggacgtggagcagaacgtg
gtcatcatcgaggaggatcagaagttcctgaagctgttggaactgttggggttgtaccag
gagcacggcagtatcatcgtcttcgttgataagcaagagaatgcggacatcctgttgaag
gagctcatgaagatggcgtacaactgtctgagtctgcacggaggtatcgaccagttcgac
agggactccacgataatcgacttcaagtctggtaaagtgaagcttctcatcgcgacctca
gtcgcggccagaggattggacgtgaaacatctgatcctagtgataaattacgactgcccg
aaccactacgaagactacgtccatcgatgcggcaggacgggcagggcgggcaacaaggga
ttcgcctacaccttcataacgcccgaacagtccagatacgcgggcgacatcataagggcc
ttcgaattggcgtcggtgaccgtgcccgagcaactcaggaacctatgggagagttacaag
acgaagcaggaatccgaaggtaaaaaggtgcacaccgggggtggtttcagcgggaaaggc
ttcaaattcgacgaaaacgaggctgctgccgtcaatgaaaagaagaagttccagaaggcg
gccctgggtttggtggattcggacgatgaggacttggagcacgacatcgaccaacagatc
gagagcatgttcgcgaccaaacggacggtgaaggagatcaaagcgcctttaggcatcgtg
aacccagcgatgggcggagtgagcacggcggtagacaagctggagttggccaagagattg
gcgtcgaagatcaacttcaccaagaccacgccgccggacgccaaattcgccacgcaggaa
gccgccgcttctatactcaagggtagcagtaacaccctatcaatcaccgccaagactgtg
gcggagcagttggccgccaagctcaacaccaagttgaattaccagccgaaggacgacgac
gagagggacgccgaagacgcggaacagaccttcaggaagtacgaggaagagctggagatc
aacgattttccgcaacaggccaggtggagggtcacttcgaaggaagcgttggctcaaatc
tcggagtattcggaagctggaattactgttcgaggtacttacgtgcccaccggtaaacaa
cccccggagggcgagaggaaattgtacctggccatcgagagtacctcggatatggcggtg
gctaaggccaaatccgaaattacgcgtctgatcaaggaggaactactcaaactgcagact
tccggtcaccacacgttcaacaaggcccgatacaaggttatttag
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