Coccinella septempunctata (seven-spotted ladybird): 123322164
Help
Entry
123322164 CDS
T07873
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123322164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cset03400
]
123322164
Enzymes [BR:
cset01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
123322164
DNA repair and recombination proteins [BR:
cset03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
123322164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT
BRCT_2
DNA_ligase_IV
mRNA_cap_enzyme
pAdhesive_11
Motif
Other DBs
NCBI-GeneID:
123322164
NCBI-ProteinID:
XP_044765963
LinkDB
All DBs
Position
X:complement(4662289..4667313)
Genome browser
AA seq
858 aa
AA seq
DB search
MLHFQTVCDLLEKVQSASGHKKKLEILKEGFAKFREDTGFNIQSNFEKFYQGIRLIVPEM
DHGRKTYNMKEHKISRAIIKMLNLGEGNDKKNLLSFSEVLNIDFADAVHSIMRKYISKKL
TCVTVDELNNDLDLIANRDTDTKLDELMLKMFRKLNNTESKWIIRIILKKLKLGIDNNKI
LNAFHPDAVEYYKSNNNLKKVCEILWEPTVKLSELNLTIFESFQPMLSKRSDVGSFIRDF
SENKTYFVETKFDGERFQLHMKEGQFKYFSRNGFDFTNEFGENFISGTLTQYLKNVFHHN
IKSVILDGEMMLWHKKKRKFGSKGMTLDVKKLKVTNEYYRPCFCVFDILLLNDTILTNEE
LTHRLKLLRETVKRNIEGTIILSDYQEANSRQGIIDILNKSMDTEQEGIVVKDPKSIYKY
KDRKSGWYKIKMEYFEDGVTDLDLILMGGYYRTNSDELTSFLVGVFSNDKDKSVLSFGKV
SSGLNFEELDIVNKRFSDLGVSRAELDKSKGKLIFGKDIPDVWLEPENSLIFTIRATELV
RCSNESFRTSYTIRFPRILKIREDKPYEDCLSVNELLELCQKNKAVIKLNKRHLELDDVL
KAKKKRKTTVIDVDRETLQRTGNFLSSMKIFVITGNEELAIGKIEDLILRFGGTICLQIE
EGVQIVLVGTITPKVTELLKKDNKFDVVKVEWLQRVTNAKRLLKYKQDEVLHIGTSFYNS
LADDVDMYGDSFTEVVNSESLRSRLSYMAEQENFINLNNTIIFKPDLPMFNKFIAYFDTH
ETINDSHSELIYNSFLDEIEFKYRLGTVTNILNSSINLIVIGPRNENRKQQLENYAKSVN
CTCFQVVCNSQLYSEEEF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacttccagactgtttgcgatttactggaaaaagtacagtctgcgtcagggcac
aaaaagaaattggaaattttgaaagaaggatttgccaaatttagagaggataccggcttc
aatattcaaagtaactttgaaaagttctatcaggggatcagactgattgttcccgaaatg
gaccatgggaggaaaacatacaatatgaaagagcataaaattagtagagcaattatcaaa
atgttgaatctgggtgaaggaaatgataagaagaatttactcagttttagtgaagtactt
aatatagatttcgctgatgctgtacattcaattatgagaaaatatatttctaaaaaactt
acatgtgttactgtcgatgaattgaacaatgatctggatctgatagccaaccgtgataca
gatacaaaattagatgaacttatgttgaaaatgtttaggaaactgaacaatacagaaagt
aaatggatcattcgaatcatattgaagaaattgaagctaggtatcgataataacaaaata
ctcaatgcattccaccctgacgctgttgaatattacaaatcgaacaataatttaaaaaaa
gtatgcgaaatactttgggaacccacagttaaactgagtgaattaaatttgactattttt
gagtctttccaaccaatgctctcaaagagaagcgatgtaggatctttcattagggacttt
tcagaaaataaaacctattttgtagagactaaatttgatggtgaaaggttccagctgcat
atgaaagaaggacagttcaaatatttctcaagaaatggttttgatttcacaaacgaattt
ggagaaaatttcataagtggtactttgactcaatacttgaaaaatgttttccaccataat
ataaagagtgttatattggatggggaaatgatgctatggcacaagaaaaagagaaaattt
gggtcaaaaggaatgactcttgatgttaaaaaactaaaagtaacaaatgaatattatcga
ccttgtttttgtgtttttgatattctgctacttaatgatacaattctgaccaatgaagag
ttgacacacagattaaaactcttacgtgaaacagtaaaaagaaatatcgagggaaccatt
attttaagcgactatcaagaagccaacagccgacaaggtattatcgatatcttgaataaa
tcgatggacactgaacaagaagggattgtcgtcaaagatccaaaatcaatttacaaatat
aaagatcgaaaaagtggttggtataaaataaaaatggagtattttgaagatggggttact
gatttggatttaatattgatgggaggttactacaggacaaattccgatgaattaacatct
tttcttgttggagtattctcgaatgataaagataaaagtgttttgtcctttggtaaagtt
tccagtggattaaattttgaagaactggatattgtgaataaaagattttccgatctcggt
gtttccagagctgaattggataagagtaaaggaaaattgatctttggtaaggacattcca
gatgtttggttggaacctgagaacagcttgattttcacaattcgggcaacagaattggta
agatgtagtaatgaatcatttcgaacttcctacactatacgttttccaaggattttgaaa
atcagggaagacaagccgtatgaagattgcttgtcagtgaatgaattattagagctttgt
cagaaaaacaaagccgttattaaacttaataaaagacatttggagctggacgacgttctc
aaggcaaaaaaaaagagaaaaacaacagttattgatgttgatagagaaaccctgcagaga
actggaaactttttgagttcgatgaagatttttgtcattactggaaatgaagaacttgca
attgggaaaatagaggacctaatactgagatttggaggtaccatctgcctccaaatagag
gaaggtgttcaaatagtgcttgttggaacaatcacaccaaaagtaacagaattgctgaaa
aaagataacaaatttgatgttgtgaaagtagaatggttacaaagggtaactaatgccaag
cgcttgttgaaatataaacaagatgaagttttgcatataggaacaagtttctacaactca
ctagctgatgatgtggacatgtatggcgactctttcacagaagttgtaaactcagaatct
ttacgaagtagactgagttatatggctgaacaagaaaatttcataaatctcaacaacaca
atcatatttaagccagatttaccgatgttcaataagttcattgcatatttcgacactcat
gaaactataaacgattcccactcagaacttatctataattcatttctcgatgaaattgaa
ttcaaatatcggttgggaactgtgaccaatattttgaattcatcaatcaatctgatcgtt
attggaccaagaaatgaaaacagaaaacaacagctggagaattatgctaagagtgttaat
tgtacttgttttcaagtagtttgcaattctcaattatacagtgaagaagagttttga
DBGET
integrated database retrieval system
