Campylobacter subantarcticus LMG 24377: CSUB8523_1465
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Entry
CSUB8523_1465 CDS
T03572
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
csf
Campylobacter subantarcticus LMG 24377
Pathway
csf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSUB8523_1465 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csf03400
]
CSUB8523_1465 (uvrB)
DNA repair and recombination proteins [BR:
csf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSUB8523_1465 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSUB8523_1465 (uvrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
Microtub_bd
SWI2_SNF2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJC92967
LinkDB
All DBs
Position
1427277..1429250
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AA seq
657 aa
AA seq
DB search
MFELTSDFSPSPDQKQAIDGLVKSIKAGNKYQTLLGVTGSGKTFTMANIIKNLNMPTLIM
SHNKSLCAQLYSEFKGFFANNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSASASLLSYDDVICIASVSANYGLGNPSEYVGMVLILELNMQISQKELLKKLVDMGYKR
NDNFFDRADFRVNGDIVDIYPAYYEDEAIRLEFFGDELEAMYHYNVLENKKGKDLKKFIL
YPTSQFSVGETRLKEAIKGIKAELNKRLAYFENENKLVEAQRLKQRVEFDLEMLQSTGMC
KGVENYALHLTGLKSGDTPYTLFDYFAIKNQDFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFINKNCKFLFVSATPAPLELELSKENIFYQIMRPTGLLD
PKIEIKDSENQVEILYDEAKKVIERNERVLITVLTKKMAEELSKYYLELGLKVKYMHSEI
DAIERNEIIRGLRSGAFDILIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTALIQTMG
RAARNVNGKVLLFAKKITKSMQEAIDTTNERRTLQEAYNKKHNITPTSVKRNIEESLKHE
LEQGEIYRKGKELEKMPAKERAKIVKELRKQMLEAAKNLEFEKAAMLRDEINKLRTL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacttactagcgactttagtccaagtcctgatcaaaaacaagccattgatggt
ttggtaaaaagcattaaagcaggcaataaataccaaaccttgctaggtgttacaggtagt
ggaaaaactttcactatggcaaatatcattaaaaacttaaacatgcctactcttatcatg
agtcacaataaaagcttatgcgcgcaactttatagtgaatttaaaggcttttttgcaaat
aatcatgtggagtattttataagctattatgattattatcaacccgaggcttatattcca
agaaccgatgtttttatagaaaaagacagctctactaatgaagacttagaaagattaaga
ctaagcgcaagtgcttcgcttttaagttatgatgatgttatttgcatagctagtgtttca
gcaaattatggtttgggaaatccaagtgagtatgtgggtatggttttgattttagagctt
aatatgcaaatttcacaaaaagaacttttaaaaaaacttgtagatatgggttataaacgc
aatgataacttctttgatagagctgattttagagtaaatggagatatagtagatatatat
ccagcttattatgaggatgaagctattagacttgaattttttggcgatgaacttgaggcg
atgtatcattataatgttttagaaaataaaaaaggtaaagacttaaaaaaatttatactt
tatccaactagtcaatttagcgtaggtgaaactagacttaaagaggctataaaaggtata
aaagctgaattaaataaacgccttgcttattttgaaaatgaaaataaactcgtagaagca
caaagactaaaacaaagggtagaatttgaccttgaaatgcttcaaagcaccggcatgtgt
aaaggggtagaaaattatgccttgcatttaacagggcttaagagcggcgatacaccttat
acgctttttgattattttgccattaaaaatcaagattttttagtcattgtagatgaatct
catgtatctttaccacaatttcgcggaatgtttgcaggggatagaagcagaaagcaaact
ttggttgattatggttttcgcttgccaagtgccttagataatagacctttgatgtttgat
gaatttattaataaaaattgtaaatttttatttgtttcagctacacctgcacctttagaa
ctagaattaagcaaagaaaatattttttatcaaatcatgcgtccaacagggcttttagat
cctaaaatagaaatcaaagatagtgaaaatcaagtagaaattttatatgatgaagctaaa
aaagttatagagcgtaatgaaagagttttaataaccgttttaactaaaaaaatggctgaa
gagcttagtaaatactacttagaacttggcttaaaagtaaaatacatgcactcagaaatt
gatgcaattgagcgcaatgaaatcatccgtggcttaagaagtggcgcttttgatatttta
atcgggattaatcttttaagagaaggacttgatttacctgaagtttcccttatagcgatt
atggatgcagacaaggaaggctttttaagaagcaccactgcactcattcaaacgatggga
cgcgcggctagaaatgtcaatggaaaagtattgctttttgctaaaaaaatcacaaaatct
atgcaagaagctatcgataccaccaatgaaagaagaaccctacaagaagcttataataaa
aagcacaacatcacaccaacctcagtaaaaagaaacatagaagaaagtttaaaacatgag
cttgaacaaggagaaatttatcgtaaaggcaaagaacttgaaaaaatgcctgcgaaagaa
cgcgctaaaatagtaaaagaattaagaaaacaaatgctagaagcagctaaaaatcttgag
tttgagaaagcggcaatgcttagagatgaaattaataaattaagaactttataa
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