Cylindrospermum stagnale: Cylst_0538
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Entry
Cylst_0538 CDS
T02398
Name
(GenBank) phycobilisome core-membrane linker protein
KO
K02096
phycobilisome core-membrane linker protein
Organism
csg
Cylindrospermum stagnale
Pathway
csg00196
Photosynthesis - antenna proteins
csg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Cylst_0538
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
csg00194
]
Cylst_0538
Photosynthesis proteins [BR:
csg00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Allophycocyanin (AP)
Cylst_0538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
Phycobilisome
DUF4214
CTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
AFZ22875
UniProt:
K9WR59
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All DBs
Position
596441..599839
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AA seq
1132 aa
AA seq
DB search
MSVKASGGSSVARPQLYQTLAVATISQAEQQDRFLGNGELNELASYFASGAKRLDIAQTL
TENSEIIVSRAANRIFVGGSPMAFLEKPRERELAMATAGGGDVQEGMKLGTVTYVESRGG
FLENLRSIFNTSSGGPTPPGFRPINIARYGPSNMAKSLRDLSWFLRYATYAIVAGDPNII
VVNTRGLREIIENACSGEATLVALQEIKAAALSFFRKDAEATEIVSQYMDVLLTEFKAPT
PSTKLRQRPSGDQQGLQLPQIYFSAAERRPKYVMKPGLSSSEKNEVVKAAYRQIFERDIT
RAYSLSVSDLESKVKNGDISLKEFVRRLAKSPLYQKQFYQPFINSRVIELAFRHILGRGP
SSREEVQKYFAIISQGGLAALVDALVDSEEYSDYFGEETVPYIRGLGQEAQECRNWGQQQ
DLFNYSAPFRKVPQFITTFAAYDRPLPDQHPYGSGNDPLEIQFGAIFPKETRNPSTSPAP
FGKDTKRILIHQGPGINNQNSNPQARGVAPGSFGPKVFKLDQLPGTIGKKAAKGASVKFS
ESSTQAIIKATYLQVFGRDVYEGQRLKVQEIKLENGEISLREFVRALAKSDLFRSLYWTP
LYVCKAIEYIHRRLLGRPTYGRQENNKYFDIASKKGFYAVVDAILDTPEYSEAFGEDTVP
FERYLTPSGEALRRLRVGSIREDVGGKLEKQETPRFVELGTVTEARTEPDIEFRINQGVT
KVREQTKVFKLVAATGDKVAVQTLISAAYRQIFERDVAPYIAQNEFTALVSKLGNGEISV
KEFIEGLGYSNLYLKEFYTPYPNTKVIELGTKHFLGRAPIDQAEIRKYNQILATQGIRAF
IGALVNSAEYREVFGEDTVPYRRFPTLPAANFPNTEKLYNQLTKQNDDVVVPSFKTVKSR
IKSENTPILAQAIADLAASAKQVDKTKPLFIELGRSYNDGRGQSVEVGVGTSRRKPVRIY
RLTDGTNQPERQQVINAIYVQVLDVFSGQIPDYYRRTELDSKLRNGEITVREFVRELASS
EIYRKRFYTPYPNTKVIEFLFRHLLGRAPATQGEIRQYNKLLADSGLRAAVEAIIDSPEY
ARYFGEDVVPYPRFPSLPAGNYLGSVQAAADLVKQSWSSLSPAVLTGRAGDR
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaggcaagtggtggaagctcagttgcgcgtccgcaactatatcaaacccta
gctgtggcgacaatttcccaagcggaacaacaagaccgctttttgggaaatggcgaactg
aatgaattagcaagttattttgcatcaggtgcaaagcgtctagatattgcccagacgcta
acggaaaattcggagattattgtatctcgggctgccaaccggatttttgtcggtggttcg
ccaatggcttttttagaaaagcccagagaacgagagttagcaatggctactgctggcggt
ggtgatgttcaagagggcatgaagctgggaactgtaacctacgttgaaagtcgtggtggg
ttcctggaaaatttgcgctccatctttaacacctcatctggcggaccgacacctccaggc
tttagaccaattaacattgcccgttatggtccaagcaatatggcgaagagcttacgggac
ttgtcgtggttcttgcgctatgctacttatgcgatcgttgctggcgaccccaatatcatc
gtggtgaatacacgaggtttgcgggaaattattgaaaatgcctgctctggtgaagcaacc
ctggtggctttgcaggaaattaaagcagcggcgctttcctttttccgtaaagatgctgag
gcaacagagattgtgtctcagtacatggatgttttgctgacagaattcaaagcacccaca
ccttcaaccaaactacgccaacgtccctccggtgaccaacaagggttgcaactgccgcag
atttattttagtgcggcagaacggcgtcccaagtatgtgatgaagcctgggttgtcatct
agcgaaaaaaatgaggtggtcaaagcagcctatcggcaaatctttgagcgcgacattacc
cgtgcttacagcttgtcggtatccgacctcgaatctaaggtgaaaaatggcgacatctcg
ctcaaagagtttgtccgtcgtctcgcaaaatctcccctttaccaaaaacagttttaccag
ccttttattaacagccgagttatcgaattggctttccgtcatattctgggacgggggcca
agtagccgcgaagaagtacaaaagtatttcgcgattatttcccaaggtggtctagcagcc
ttagtagatgctttggtggattctgaagaatactcagactactttggcgaagagacagta
ccctacatccggggtttgggacaagaagcacaagaatgccgcaactggggacaacagcaa
gacctgtttaactacagtgcgcctttccgcaaggtacctcagtttattaccacattcgct
gcttacgatcgcccattaccagatcaacatccctacggttctggtaatgaccccttggaa
attcaatttggggcgattttcccgaaagaaactcgtaaccccagcaccagcccggctcct
tttggtaaggataccaaacgcatcctgattcaccaagggcctggtattaataaccaaaat
agcaatccccaagcgcggggtgtggctcctggttcttttggtcccaaggtgttcaagtta
gatcaacttcctggcactattggcaaaaaggctgctaagggcgcgagtgtcaaattctct
gaaagctccacgcaggcgataattaaagctacttacctgcaagttttcggtcgcgatgtc
tatgaaggtcagcgcctgaaagtgcaagaaattaagctggaaaacggcgaaatttcgctg
cgggagtttgtgcgtgctctggctaagtcggatttattccgcagcttgtactggacaccg
ctgtatgtttgtaaggcaatcgagtacatccaccgccgcttgttgggtcgtccgacttac
ggccgtcaagaaaacaataagtactttgacattgcctctaagaagggcttttacgccgta
gtagacgccatcctagataccccagagtacagtgaggcatttggtgaagatacggttcct
tttgaacggtatctgactcctagtggtgaggctctacgacgcttacgggttggcagtatt
cgcgaagatgtcggcggcaaacttgagaaacaagaaacgccacgctttgtggaactgggt
acagtcacagaagcgcggacagaaccggatattgagttccgcatcaatcaaggtgtgaca
aaggtgcgcgaacagacgaaagtctttaagttggtggcggctactggcgacaaagttgcc
gtacaaactttgatcagtgctgcttatcgccagatttttgaacgtgatgtggcaccttac
attgctcagaacgaattcactgccttagttagcaagctggggaacggtgaaatttccgtt
aaggaatttatcgaaggtttgggttactcgaacctctacctgaaagaattctacacacct
taccccaacaccaaggtaattgagttgggaactaagcacttcttgggacgagcacccatc
gaccaggcggaaatccgtaaatacaaccagattttggctactcaaggtattcgtgccttt
attggtgctctggtgaacagtgcggagtatcgcgaggtgtttggtgaagatacagtgcct
taccgtcgcttcccaaccctacctgcggctaacttcccgaatactgaaaagctttacaac
cagctaactaagcagaatgatgatgtggttgtacctagctttaagacagtgaagtctcgt
atcaaatctgaaaatacgccgattttggcgcaggcgatcgcagacttggcagcatccgcg
aagcaagtggacaagactaagcccttgttcattgaattgggtcgttcttacaacgatggt
cgtggacagtcggtagaagtgggtgtaggtacgagccgccgcaaaccagtaaggatttac
cgcctcaccgatggcacaaatcaaccagaaaggcaacaggtaatcaacgccatttacgtt
caagtgttggatgtatttagcggtcagattcccgattattaccgccggactgaactagac
agcaaactgcgtaacggggaaattaccgtccgtgagtttgtccgtgaactagctagttca
gaaatctatcgcaaacgtttctatacgccttatcccaacaccaaagtgattgagttccta
ttccgtcacctattgggacgcgcacccgccactcagggcgaaattcgccagtataacaag
ttgctggctgatagcggtttgagagcggctgtagaggcgatcatcgatagcccagagtac
gcccgttactttggtgaagatgtggtgccttacccacgcttcccatcgctgccagcaggt
aactacctcggcagtgtacaggcggcagctgacttggtgaaacaatcctggtctagtttg
tctcccgctgtcttaacgggacgagcaggcgatcgctaa
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