Camellia sinensis (tea plant): 114287008
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Entry
114287008 CDS
T07364
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03022
Basal transcription factors
csin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114287008
09124 Replication and repair
03420 Nucleotide excision repair
114287008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csin03021
]
114287008
03400 DNA repair and recombination proteins [BR:
csin03400
]
114287008
Transcription machinery [BR:
csin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114287008
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114287008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
114287008
NCBI-ProteinID:
XP_028086051
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MPQVKIIAKNFMDMVASLPAMKLDKLYDNAFICEAILRSLPPLAKKYVLQMLYIDVPVSA
KSMQEWVLADGYSKHNVAIDRLIQLRLFTEAVDRKKETTYRLNPTFQINLQKHIIHGGVL
PREPMPSNITVRLPSLEDLDAYAAEQWECFLLHLISSSTQGEKTTNFSSSLMKIFQRGLL
SQRDKEPPKLTESGFQFLLMDTNAQLWYIIREYITNSEERGLDSADLISFMLELSFHVTG
EAYNMNTLTDSQRNVIKDLADLGLVKLQQGRKESWFIPTKLATNLSISLSDTSSRKLGFV
VVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVAAITKENLYNAFENGIMAEQDIIC
FFDEPLDLQIISFLQQNAHPRVAERVPSVPENVTDQIRLWESDMNRVEITPAHFYDEFPT
REVFDAACDFAREYGGLLWEDSKTMRLVVKAEILMHMRDFLRREKQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagtgaagatcatcgccaagaacttcatggacatggtggcctcgttgcctgcc
atgaagctcgataagctctacgacaacgccttcatttgtgaagccattctcagatctttg
ccaccattagccaagaagtatgtattgcaaatgttgtacattgatgtacctgtgtcagca
aagtcaatgcaagagtgggtacttgcagatggatactctaaacataatgtagccattgat
agattgattcagttgagactatttactgaagctgttgacaggaaaaaggaaaccacttat
agattaaacccgacgtttcagattaaccttcagaagcatataatacatggtggagtttta
ccaagggaaccaatgccttctaatatcactgtgaggctcccaagcttggaggatttagac
gcctatgctgctgagcaatgggagtgtttcttgctgcaccttataagctcctccactcaa
ggtgaaaagacaacaaacttcagctcttctctgatgaaaatattccagcgaggtcttctg
agtcaaagagacaaagaacctccaaaactaactgagagtggtttccaatttttgctgatg
gatacaaatgcacaactctggtacataatcagggaatacatcacaaattctgaggagcga
ggtttggattcagcggatttgatttcatttatgctggagcttagtttccatgtcactggc
gaggcatataatatgaacacattgactgatagtcagagaaatgtaataaaggaccttgcg
gacttgggattggtcaagctccagcagggtaggaaagagagttggtttattcctactaag
ttagctaccaacctgtcaattagcttatcagatacatcatcacggaaactcggctttgtt
gttgtggaaacaaactttagagtgtatgcatattcaacatctaaactacattgcgaaatt
ttacgcctcttctcaagggtagaatatcagcttccaaatcttattgttgccgcgattaca
aaagaaaacttgtataatgctttcgaaaatggcatcatggcagagcaggatataatttgc
ttctttgacgaacctctggatttgcagataatttcctttcttcagcagaatgcacatcct
cgagttgcagagagagtaccctctgtcccagaaaatgtcaccgatcagattaggttgtgg
gaatcagatatgaatagggttgagattacaccggctcatttttatgatgagttccctact
agggaggttttcgatgctgcttgtgactttgcacgagaatatggaggtttgttatgggaa
gactcaaaaacgatgcgcctagtcgtgaaggctgaaatactaatgcacatgcgagatttt
ctgcgtcgtgaaaagcaatag
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