Cronobacter sakazakii ATCC 29544: CSK29544_02379
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Entry
CSK29544_02379 CDS
T03903
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
csj
Cronobacter sakazakii ATCC 29544
Brite
KEGG Orthology (KO) [BR:
csj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csj03400
]
CSK29544_02379
DNA repair and recombination proteins [BR:
csj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CSK29544_02379
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
SLFN-g3_helicase
zinc_ribbon_2
AAA_16
zf-tcix
AAA_22
zf-ribbon_3
UPF0547
AAA
Motif
Other DBs
NCBI-ProteinID:
AKE95336
LinkDB
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Position
complement(2453115..2454944)
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AA seq
609 aa
AA seq
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MARSQDENDSWHNISVIPISAGPMSFTLRPYQREAVDATLNHFRRHDAPAAIVLPTGAGK
SLVIAELARLARGRVLVLAHVKELVAQNHAKYLALGLEADIYAAGLARKESHGKVVFGSV
QSVARYLDHFQGEFSLVIVDECHRISDDDDSQYQQILTHLRKQNPRLRLLGLTATPFRLG
KGWIYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQ
SNGLFSEADLNRELKQQQRITPHIVSQIVEFAADRRGAMIFAATVEHAREITGLLPAGEA
ALITGETPGRERDAIIEAFKAQQLRFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQI
VGRGLRLSPGKKDCLILDYAGNPHDLYAPEVGAPKGKSDNVPVQVFCPACGFANTFWGKT
TADGTLIEHFGRRCQGWFEDDDGHREQCDYRFRFKNCPHCNAENDIAARRCRECDKVLVD
PDDMLKAALKLKDALVLRCGGMQLQPGADEKGEWLKVTYYDEDGADVSERFRLHTPAQRT
AFEQLFIRPHTRTPGVPLRWITVNDIVAQQALLRHPDFVVARLKGQYWQVREKVFDYNGR
FRRANELRG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctcacaagatgaaaatgattcgtggcataatattagcgtgatccctatttct
gcaggccccatgtcctttactttacgtccctaccagcgcgaagcggtggatgccaccctt
aaccattttcgccgccacgacgcgccagcggcgatcgttctgccgaccggcgcaggcaaa
agcctggtgatcgccgaactggcgcggctcgcacgcggccgtgtgctggtgctcgcccac
gtgaaagagctggtggcgcaaaaccatgcgaaatatctggcgctcgggcttgaggccgat
atttacgcggccggtctcgcacgcaaagagagccacggcaaggtcgtgttcggcagcgtg
cagtcggtggcgcgctacctcgaccattttcagggagaattctcgctggtgattgtcgat
gagtgccatcgcattagcgatgacgacgacagtcagtatcagcaaattctcacgcacctg
cgtaagcagaacccgcgcctgcgcttactggggctgaccgcgacaccgtttcgcctcggc
aagggctggatttaccagttccattatcacggcatggtgcgcggcgatgaaaaagcgctg
tttcgcgactgcatctacgagctgccgctgcgctacatgattaaacacggctacctgacg
ccgccggagcggctcgatatgccggtggtacaatatgatttcagccgtctgcaggcccag
agcaacgggctgttcagcgaggctgaccttaaccgcgagctgaaacagcagcagcgcatc
acgccgcatatcgtgagccagatagttgaattcgccgctgaccggcgcggcgcgatgatt
ttcgccgcaaccgtcgagcacgcgcgtgaaatcaccggcctgctgcctgcgggcgaagcg
gcgcttatcaccggcgaaacgccaggacgcgaacgcgacgcgattattgaggcgtttaaa
gctcagcaactgcgttttctcgtcaacgtggcggtactcaccaccggctttgacgcgccg
catgtggatctcatcgctattctgcgcccgaccgaatcggtcagcctctatcagcagatt
gtcgggcgcgggctacggctgtcgccgggcaaaaaagattgcctgatccttgattacgcg
ggtaacccgcacgatctctacgcgccggaagtgggcgcgccgaagggtaaaagcgacaat
gtgccggtgcaggtcttctgccccgcctgcggtttcgccaataccttctggggcaaaacc
acggcggatggcacgcttatcgagcatttcggccgccgctgccagggctggttcgaagat
gacgatggccaccgtgaacagtgcgactaccgcttccgctttaaaaattgtccgcactgc
aacgcggaaaacgacatcgccgcgcggcgctgccgcgaatgcgacaaggtgctggtagac
ccggacgacatgctgaaagcggcgctgaagcttaaagacgcgctggtgctgcgttgcggc
gggatgcaactccagccgggcgccgatgagaaaggcgaatggctgaaagtgacctattac
gatgaggacggcgcggacgtcagcgaacgcttccgcctgcacacgcccgcgcagcgcacc
gcctttgaacagctttttattcgcccgcacacccgcacgccgggcgtgccgctgcgctgg
ataaccgtcaacgatatcgtcgcccagcaggcgctgttgcgtcatcccgattttgtggtg
gccaggctcaaaggccagtactggcaggtgcgtgaaaaggtgttcgattataacgggcgg
ttccgccgcgccaatgaattacgcggttag
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