Coccomyxa subellipsoidea: COCSUDRAFT_26989
Help
Entry
COCSUDRAFT_26989 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_26989
Enzymes [BR:
csl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
COCSUDRAFT_26989
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
COCSUDRAFT_26989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
17044355
NCBI-ProteinID:
XP_005650889
JGI:
26989
UniProt:
I0Z6S6
LinkDB
All DBs
AA seq
724 aa
AA seq
DB search
MKSLWRLLLSVKTNPVPIQDRVTQQDGSLRDTDHSPKTCQNNSGGAQEPDVVAAASQEAS
CCNGAGAEEKHSTANSSPWGDGCSSNACQCTAKTAASEPLVTAGISPSRGKVLFGSQKGT
SSTLAGQLAEQAAAQGVQLAVMDLGVFEVEQLWKEQLVIIVTSTYEDGTPPNNARWFCQW
LGASSTDCRVGADALKDTSFAVFGCGNSLYEANFNKVAMTVDEQLGGLGGQRLLPCGRGD
EDTGKMEQQFAAWSDALLQALREGPPSDEAAVEQTEGDARSDGYCTTDSDDDEAEQEEEV
ADLEDLAGPVSRNGVGDRAASTSGRAAADIGADAAAGPKEMLTPPLRAALGKQGYKLVGS
HSGVKLCRWTKSMLRGRGGCYKHAFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGRE
WRWKMDGPEEIVEGALSHHVRMINEFRGVPGVKADRLAEGMQVRHCALSLVGEPIMYPEI
NRLIALLHARRISSFLVTNAQFPDRIRQALLCLSLAPVTQLYVSVDAATRDELKAIDRPL
FKDFWQRFLDCLTTLRDKRQRTVYRLTLVKGWNMEAAQEYAQLVALGQPDFIEIKGVTYC
GSSSASSLTMHNVPYHQDICAFGQVLCDACNGEYGLSCEHAHSCCILLARKSRFLIEGRW
HTWIDYNKFQELAAGTSPFSSQDYMLPTPDWAVYGAPEAGFDPLEARVKKARNHPAKAEI
GGCT
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcactgtggagattgctcctgtcggtcaagacgaacccagtgcccatccaggac
agggtcacacagcaagatggctccttaagagacactgatcacagccccaagacttgccaa
aacaattcaggaggtgcacaggaacccgatgttgtagcagcagcttcccaggaagcctca
tgctgcaatggagccggtgcagaggaaaagcatagcaccgctaacagctctccatgggga
gatggctgcagctcaaatgcatgtcaatgcacagccaaaacagcagcttcagagcctctt
gtcacagcaggcatcagcccaagcagaggcaaggtcctctttggatcacagaaggggacc
tcgtcgaccttggctggccagctcgcagagcaggctgcagcacagggcgtccagctggca
gtgatggacctaggggtctttgaggtcgagcagctgtggaaggagcagctggtgatcatt
gtcacctccacctacgaggatggcacaccgcccaacaatgccaggtggttctgtcagtgg
ctgggagcgagctcgacagactgccgggtgggagcagatgcgctgaaggataccagcttt
gcggtgttcggctgcggcaactctctgtatgaggccaatttcaacaaggttgccatgact
gttgatgagcagctcgggggcctgggcgggcagcggctgctgccatgtgggcggggtgac
gaggacaccggcaagatggagcagcagtttgcggcctggagtgacgccctgctgcaggct
ctcagggagggtcccccctctgatgaggcggctgtggaacagaccgagggtgatgctcgc
tctgacgggtactgcaccacagactcagatgacgatgaagcagaacaggaggaggaggtg
gcagatctggaggacctggcagggccggtgagcaggaacggcgtcggagacagggcagcc
agcacgagcgggcgggcggccgcagatatcggcgcggacgcggccgccggccccaaggag
atgctgacgccgccgctgcgcgctgcgctgggcaagcagggctacaagcttgtggggtcg
cacagcggggtgaagctgtgccggtggacgaagagcatgctgcgcgggcgcggcggctgc
tacaagcacgccttctacggcatcgagagccaccgctgcatggaggcaacgccctcgctc
gcctgcgccaacaaatgcgtcttctgctggcgccaccacaccaatcccgttggccgtgag
tggcggtggaaaatggatggaccagaggagatcgtggagggggcgctgagtcaccatgtg
cgaatgatcaacgagttcaggggcgttcctggtgtcaaggcagaccgcctggcagagggc
atgcaggtgcggcactgcgcgttgtcgctggtgggcgaaccgataatgtacccggagatc
aaccgcctcattgcgctgctgcacgcccgccgcatatcctcattccttgtcaccaacgcc
cagttccctgaccgcatcaggcaagcccttctctgcctttcactggcgcctgtgacgcag
ctgtacgtgtcggtggacgcggcgacgcgcgacgagctgaaagcgatagacaggccgctc
ttcaaggacttctggcaacgctttctggactgcctcaccaccctgcgcgacaagcgccag
cgcaccgtctaccggttgaccctggtgaaggggtggaacatggaggcggcccaggagtac
gcgcagctggtggccctgggccagccggacttcatagagatcaagggcgtcacctactgc
ggctcatccagcgcatcctccctcaccatgcacaacgtgccctaccaccaggacatctgc
gccttcggtcaggtcttgtgcgacgcatgcaacggcgagtatgggctgtcctgcgagcac
gcgcactcgtgctgcatcctgctagcgcgcaagtcgcgcttcctcatcgagggccgctgg
cacacctggatcgactacaacaagttccaggagctggctgctgggacgtcgccattctca
tcacaggattacatgctgcccacaccggactgggcagtgtatggggcgccggaggcaggc
tttgatccactggaggcccgagtgaaaaaggccaggaaccaccccgccaaggctgaaatc
ggagggtgcacatag
DBGET
integrated database retrieval system
