Coccomyxa subellipsoidea: COCSUDRAFT_30714
Help
Entry
COCSUDRAFT_30714 CDS
T02914
Name
(RefSeq) DEAD-domain-containing protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_30714
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_30714
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCSUDRAFT_30714
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-60S particles
Helicases
COCSUDRAFT_30714
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
COCSUDRAFT_30714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
17038590
NCBI-ProteinID:
XP_005645158
JGI:
30714
UniProt:
I0YQE5
LinkDB
All DBs
AA seq
698 aa
AA seq
DB search
MGVAAEEQLAIKKSKKSKAVAEDGLVVAETPLKQKKKEKKKSATGEKESKKRKLNTDDLV
EEGAEKKIKKKKKQIVEEQEPSNAASDSADSEQFVEVAKPADPLAVDNFRLSDKVKALLR
EKGIEALFSIQAHTLNHLLDGFDLVGRARTGQGKTLAFVLPIVERLLAHNISATRRQQGR
TPRVIVLAPTRELAKQVHADFENIGRAANLSTVCLYGGAPMSPQEQILRRGCDVVVGTPG
RVKDHLERGNLKLQDLMFRVLDECDEMLNMGFVEDVEKILNAGGDIKVQTLLFSATLPSW
VKDITRRFLQPNHKLVDLVGTDKMKASTSVKHMVLPCHWSQRATVAADLVRCYGALGRTI
IFCDTKKDCNELVASLGEGMRAQPLHGDIPQQQREVTLKAFRAAKFDILVATDVAARGLD
INGVELVIQIEPPKDPETYIHRSGRTGRASSTGVSVTLVDRKKEGLIPFIAKRAGVTFER
IGAPQPSEMARIAGERASESLVEVDKTVVPWFRAAAAQLLETVGDPEEALAMALAKVTGF
SSIRARSLLTAHEDYTTLQFHAGQEIQRPGFVFTSLRRHLSDEVVEQIKGITLTTDGKSA
IFDVPSGIAQPYLTQPATLPELKAREGGERQEATTGSGYGGGFGGRGGGFGGGRGGGGRG
GGFTQGRSFGGSGGRGGGGRGGSSGGFRGRGGFSRGSR
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggctgcagaggagcagttggcgatcaagaagtcaaagaaatcaaaagcagtg
gctgaagatggcctagtggtcgctgaaacgccattgaaacagaaaaagaaggaaaagaaa
aagtcggccactggtgagaaagagtcaaagaaaaggaaactcaatacagatgatctggtg
gaggagggtgccgagaagaagataaagaaaaagaagaagcagatcgtggaagagcaggag
ccctccaacgccgcatctgacagcgccgacagcgagcagtttgtggaggtagccaagcca
gcagatcctctggcggtggataacttccggctgtctgacaaagtcaaagctcttttgagg
gagaagggcatcgaggcgctctttagcatccaagcgcacaccctgaaccacctcttggat
ggattcgacttggtgggcagggctaggactggacagggcaagactctggcatttgtgttg
cccattgtggagcggctgctggcccacaatatctcagcgaccaggaggcagcaaggcagg
actccgcgcgtcattgtgctggcacccacccgcgagctcgccaagcaggtgcacgcggac
tttgagaacatcggccgcgcggcaaacctgagcacggtgtgcctgtacggaggcgccccc
atgtcgccgcaggagcagattctgcgccgcggctgcgatgtggtcgtgggcacccccggc
cgtgtcaaggaccatctggagcgcggcaacctcaaactgcaggacctcatgttccgcgtg
ctggacgagtgcgatgagatgctgaacatgggctttgtggaggacgtggaaaagatcctg
aatgctggcggggacatcaaggtgcagacgctgctcttcagcgccacgctgccctcctgg
gtcaaggacatcacccgccgcttcctgcagcccaaccacaagctggtcgacctggtgggc
actgacaagatgaaggcgtcgacgagcgtgaagcacatggtgctgccatgccactggagc
cagcgcgcgacggtggcggccgacttggtgcgctgctacggcgcgcttggccgcaccatc
atcttctgcgacaccaagaaggactgcaacgagctcgtggccagcctgggcgagggcatg
cgtgcccagcccctccacggagatatcccccagcagcagcgcgaggtgaccctcaaggcg
ttcagggcggccaagtttgacatcctggtggcgactgacgtggcggctcgcggcctggac
atcaacggcgtggagctcgtcatccaaatcgagcctcccaaggacccggagacgtacatt
cacaggagtgggcgcacaggccgtgcgagcagcactggtgtctcagtgacgctggtggac
cgcaagaaggagggcctgatccccttcatcgccaagcgtgccggtgtcaccttcgagcgc
atcggcgccccccagccctcagagatggcccgcatcgcaggcgagagggcgtcagagtcc
ctggtagaggtggacaagacggtggtgccatggttccgggcagctgccgcgcagctgctg
gagactgtgggggacccagaggaggctctggccatggcccttgccaaggtcaccggcttc
tcctccatcagggcgcggtcgctgctgacggcgcatgaggactacacgacgctgcagttc
catgccggccaggagatccagcggccgggcttcgtgttcacctcccttaggcgccacctg
tctgacgaggtggtggagcagatcaagggcatcaccctgaccaccgatggaaagagcgcc
atctttgacgtgccctccggcattgctcagccctacctcacacagccggccacactgccg
gagctcaaggcgcgcgagggcggtgagcgccaggaggcgaccaccgggtccggctacggc
ggcggcttcggcggccggggcggcggctttggcggtggccggggcggcggcggccgcggg
ggtggattcactcagggccgcagctttggcggatcgggcggccgcggcggaggcggccgc
ggcggttcttccgggggtttccggggacgcggcgggtttagccgcgggtctagatag
DBGET
integrated database retrieval system
