Coccomyxa subellipsoidea: COCSUDRAFT_4708
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Entry
COCSUDRAFT_4708 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_4708
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_4708
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
COCSUDRAFT_4708
Spliceosome [BR:
csl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
COCSUDRAFT_4708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_5
Cas_Cas2CT1978
PHM7_cyt
DUF4523
BRAP2
Motif
Other DBs
NCBI-GeneID:
17038831
NCBI-ProteinID:
XP_005645396
JGI:
4708
UniProt:
I0YR33
LinkDB
All DBs
AA seq
264 aa
AA seq
DB search
NEDAKALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAA
IALKTINGRILYNKEVRIQWAFQKEKTENTASHSHIFVGNLSGDVADPVLLQAFQHLGEC
SDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAHHKTEAVTGL
DIDTVDRADPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKGGYGFVTYRDHSA
AVQAIVGMNGKELKGKMVKCSWGR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
aacgaggatgccaaggcgctgtatgtgggaaatttacacccatacgtaaacgaggcagtg
cttcaggacatcttttccacgctgggcactgtgtcagaagtcaggattgtgaaggacaga
gccactggtaacagtgctggctctgcctttgtcaaatttgaggaccaccaggccgctgca
atagcgctcaagacaatcaacggccgcattttatacaacaaggaagtgcgcatccagtgg
gccttccagaaagagaagacagagaacacagcctcccattcccacatctttgtgggcaac
ctgagcggtgatgtggcagaccctgtcttgctgcaagcctttcagcaccttggcgagtgc
tctgatgcccgtgtgatgtgggatcatagcactggccgctccaagggttttggatttgtt
tccttcaggaccaaagaagctgcagagaaggcgctggctgagatggacggggctcaagtg
gggcagtggaagatccggtgcggctgggcacaccacaagaccgaggcagtgaccggcctg
gatattgacacagtggacagggcagatcctgccaacacaaatgtgtacgtgggcaacctg
cccacagaggtgatggaggaggacttgagggctgcgtttggggcgtatggcgagatcacc
ggcttgaagccctgccacaagggcggctatgggtttgtcacgtaccgcgaccactccgcc
gccgtgcaggccatcgtcggcatgaatggcaaggagctcaagggcaagatggtcaagtgc
tcgtgggggagg
DBGET
integrated database retrieval system
