KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_47676
Entry
COCSUDRAFT_47676  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K12821  pre-mRNA-processing factor 40
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_47676
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_47676
Spliceosome [BR:csl03041]
 Complex A
  U1 snRNP components
   U1 related factors
    COCSUDRAFT_47676
 Complex B
    COCSUDRAFT_47676
SSDB
Motif
Pfam: FF WW
Other DBs
NCBI-GeneID: 17040729
NCBI-ProteinID: XP_005647286
JGI: 47676
UniProt: I0YWH3
LinkDB
AA seq 716 aa
MAGLGPGPMHRPPSLPGLPGPPGSGQAMPQQLRPPMPLGGSAGATPNVWTEHTAPDGRKY
YHNKALNKSSWEKPAELLSPKEQKETSGSEWKEFTAPDGRKYYYNKVTKESKWTVPDELK
QAREAAAAKASPNPAAGSVQVVKLDAGSSPASVPNGASQASPLPTPSATVKDDADAKPAA
SAAAAADVKFMYSSKEEAKDAFKELLASAQVASDWSWEQTMRSIISDPRYSALKSLGEKK
ACFNEYQQARKNEEVFEKRQRLKRGREEFTAMLESTTDLRASTRYSAAAALLEDDPRWKA
VQREERELLYADFIKEKDKKEREAKKAERRRRTAAFRVLLEKTTGIKVDTPWRKAMVKLE
GENEYEALDKLDRLEVFQDYILHLERKEKEAKEKEKEERRRRERKNRDAFKDLLQRHLSE
GVLVAHMRWKDYQPLVKKEESWIAVEKNLTGSSAKELFEDALEVADAQFDKDKALLKEVT
KEIPVQPDSTFDHFNAALEAVDSVKNVIKPNRKLVFDELLAKVKERAAKEEKRRKRARDD
FIDLLRDSRAMTVDSSWEDIRPSLESAPEYKAISKEEREQAFNEYRAYLKEKAERRKAAE
DGEEGNADKHKKKRHKEKKDKRDRDGGDEDDKRHKRSKRDEDAEGGSEEKKSKRHKRDKE
KRHRSSRKSEGEAAADAGDGATPDKEDGEPAAAATPAADGVAAAPATEEPTEDGEL
NT seq 2151 nt   +upstreamnt  +downstreamnt
atggcggggctggggcctgggcccatgcacaggccgcctagcctgcccggcctgcccggc
ccgcccgggagcgggcaggcaatgccgcagcagctgcggccgcccatgccgctcgggggc
agcgccggggcgaccccgaacgtctggacggagcacaccgcgcctgacgggcgcaagtac
taccacaacaaggcgctcaacaagtccagctgggagaagcccgctgagctcctgtcaccc
aaggagcagaaggaaacctcaggatctgagtggaaggaattcacggccccagacggccgc
aaatactactacaacaaggtgactaaggagtcaaagtggaccgtgccggacgagctgaag
caggcaagggaagccgctgccgccaaagccagccccaaccctgctgcaggctcagtgcag
gtggtgaagctggatgctggaagcagtccggcctcggtgcccaacggcgcgtcgcaggcg
tccccgctgccgacgccctcggccactgtcaaggatgatgcggacgccaaacccgcagcc
agtgccgcagcagccgctgatgttaaattcatgtactcctccaaggaggaggccaaggat
gcattcaaggagctgctggcgtcggcacaggtggcgtctgactggtcctgggagcagacc
atgcgcagcattatcagcgaccccaggtactcagcgctgaagtcgctgggtgagaagaag
gcgtgcttcaacgagtaccagcaggcgcgcaagaacgaggaggtgtttgagaagcggcag
cggctgaagcgcgggcgagaggaattcaccgccatgctggaatcgacgacggatctgcgc
gccagcacccgctactccgcggccgctgccctgctcgaggatgatcctcgctggaaggcc
gtgcaaagggaggagcgggagcttctgtacgccgacttcataaaggagaaggacaagaag
gagagggaagccaagaaggccgagcgcaggcgcaggacggccgccttcagggtgcttctg
gaaaagaccaccggcatcaaggtggacacgccctggcgcaaggcaatggtgaagttggag
ggggagaacgagtacgaggccctggacaagctggaccgcctggaggtcttccaggactac
atcctgcacctggagaggaaggagaaggaggccaaggagaaggagaaggaggagcggcgg
cggagggaacgcaagaatcgcgacgccttcaaagacctgctccagcggcacctcagcgag
ggtgtcctcgttgcccacatgcgctggaaggattaccagccgctggtgaagaaggaggaa
tcgtggatagccgtggagaagaacctgacggggtcctcggccaaggagttgtttgaggac
gcgctggaggtggcagatgcgcagtttgacaaggacaaggccttgttgaaggaggtcacc
aaggagattcccgtgcagcctgactccacctttgaccacttcaacgccgccctcgaagcc
gttgacagcgtcaaaaacgtcatcaagcccaacaggaagctggtgtttgatgagctgctg
gccaaggtgaaggagcgcgcggccaaggaggagaagcgccgcaaacgcgcacgcgatgat
ttcatcgatctgctgcgtgattcgcgcgccatgacggtcgactcctcttgggaagatatc
cggccctccctggaaagcgcccccgagtacaaagcgatttccaaggaagaaagggagcag
gccttcaatgagtacagagcatacctgaaggagaaggcggagagaaggaaggcagcagag
gatggcgaggaggggaacgctgataagcacaagaagaagcgccataaggagaagaaggac
aagcgcgaccgtgacgggggagatgaagatgacaaacggcacaagcggtcaaagagggac
gaggatgcagaggggggctccgaggagaagaagagcaagcggcacaagcgagacaaggag
aagcgccaccgcagcagccgcaagagcgaaggagaagcggcggccgacgccggggacggc
gccacgcccgacaaggaggacggcgagccggccgcagccgccaccccggcggccgacggc
gttgcggccgcgccggcaacggaggagccaaccgaggacggcgagttgtga

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