Coccomyxa subellipsoidea: COCSUDRAFT_48946
Help
Entry
COCSUDRAFT_48946 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K10990
RecQ-mediated genome instability protein 1
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_48946
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
COCSUDRAFT_48946
FA (Fanconi anemia) pathway
COCSUDRAFT_48946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_N_C
RMI1_C
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
17037403
NCBI-ProteinID:
XP_005643979
JGI:
48946
UniProt:
I0YM16
LinkDB
All DBs
AA seq
514 aa
AA seq
DB search
MDEVKASLAEMGIHLKSAFITKVMRLLTTPTAPVEERVQLIMSHFLTADLNMCGSGCLPH
NLHSEHNSVLRGRHVLQVDEAVDTAACAKQRYEGAGGRRCLKLSLTDGQRRAFAFEQTPI
AAIKTLCPAGLKVVITDAPIKRGMLVLKPENISVIGGEVERMEQARQRMVERWKQPVACS
SGRNGATVNLFVAATAAAWPQQAADGVPGVPPQLPQLPPAAHSPQRQQAPESRINPQVHP
RNIPPPAPVPRSQNQGNIAQAARPTPARQQRSAREVGQGAAGGLMQQSDSQEVEVIDVSD
AEGRGDAPADSESSLDSWGDHAAALAERGRNRLKRKAPAQLIIEDDEQESLSEQPPQSRP
RASAADKPDRAQEMCEMRGALTSLSQLADLDEKDYPATVRVHGSIVGMVSNLHFMDENRA
VLDGWKLDMSIEDSTSGRVQIVAVCDSFLVEFLGLTTRDAYSLARQGQVDVLRQKLRHLK
QLVQDFQGFMALEVSNANAKPLVLSLEAGQRSAP
NT seq
1546 nt
NT seq
+upstream
nt +downstream
nt
gatggatgaagtgaaggcatcgttggctgagatgggcatccatctgaaatctgccttcat
caccaaagtcatgagacttctcactacgcccacagctccagtagaggagcgagtccagct
cataatgtctcatttcttgaccgctgacctcaatatgtgcggatcgggatgcctcccaca
caatctgcactccgaacacaactctgtgctgaggggccggcatgtgctgcaagttgatga
ggccgtcgacacggcagcctgtgcaaagcagagatatgaaggggcgggaggcaggaggtg
cctgaagctgtctctcacggatggacagcgccgtgcctttgcctttgagcagacacctat
agcggccatcaaaactctctgccctgcaggcttgaaggtggtcatcacagatgcaccaat
caagaggggcatgcttgttctcaagccagagaacatcagtgtcattggaggcgaggtgga
gaggatggagcaagctcgccagaggatggttgagcggtggaagcagcccgtggcatgcag
ctctggaaggaacggcgccactgtgaatctgtttgtggcagcaactgccgctgcatggcc
ccagcaggccgctgatggagtcccaggagtgccgccacagctgccccagttgccaccagc
cgctcacagtccacagagacagcaggcacctgaatccaggatcaacccccaggtccaccc
cagaaacatcccccctcctgcgcccgtgccacgcagtcagaatcaggggaacattgcgca
ggcagccaggcccactccagcccgccagcagaggagtgccagggaggtgggccagggtgc
agctggtgggctgatgcagcagtctgacagccaggaagtcgaggtgatagatgtcagcga
tgcagaggggcgcggtgatgcgccagctgacagcgagagctcgcttgacagctggggcga
ccacgcggcggcgttggccgagcggggacgcaacaggctgaagagaaaggcgcctgcgca
gctgatcattgaggatgatgagcaggagtccctgtccgagcaaccgccacagtcccgacc
tcgcgccagcgctgctgataagcctgacagggcacaggaaatgtgcgagatgcggggagc
tctgacttccctgtcccagcttgcagacttggatgagaaggactaccctgccactgtacg
agtgcatgggagcattgtgggcatggtgagcaaccttcacttcatggacgagaacagggc
tgtgctggacggctggaaactggacatgagcattgaggacagcacaagtggcagagtgca
gatcgtggcagtgtgtgactcatttctcgtggaatttctaggtctgacaacaagggacgc
atattctctggcaagacagggccaggttgacgtgctgaggcagaaattgcgtcatctgaa
gcagctcgtccaagactttcagggcttcatggcactggaggtcagcaatgcaaatgcaaa
gccccttgtgctatctctggaggcaggacagagatctgctccctga
DBGET
integrated database retrieval system